New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 1441334	35 (0.870)	4 (0.100)	4/298	NT	10.3%	coding (207/906 nt)	feaR	transcriptional activator for tynA and feaB
	?	CP009273	= 1441385	36 (0.930)					coding (156/906 nt)	feaR	transcriptional activator for tynA and feaB

TGACTGAGTTGCACCATGGGTAAGTCAGCGTCCAGTCTTTCTGCGCAGATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTCCGGTAAAATTTCCGCATACCTGATTGATTTGGGAAAGCCATTGCTGAAACTCATTATCCACTGCGGGGTTCATGGCACGTTTTCGCTCTGTGAAATGTATTTTTATTGTTGCATTTGTGTTGCAATAAACGAAGCTAAT  >  CP009273/1441086‑1441606                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                 tGACTGAGTTGCACCATGGGTAAGTCAGCGTCCAGTCTTTCTGCGCAGATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGTGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATCTCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCCCCATTATGGCCTGACCACTAAGCTAAAAAACGGTGTAAAACCAGGCATCGTCGCCGCCCTTTACTTccct                                                                                                                                                                                                                                                        >  2:229414/1‑273 (MQ=255)                        gTCAGCTTCCAGTCTTTTTGGGCAGATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCAcc                                                                                                                                                                                                                                  <  1:229416/274‑1 (MQ=255)                             cGTCCAGTCTTTCTGCGCAGATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCAATAAGCTGAAAAACGGTGTAAAAACAGGAATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGAACAATTCACCCCGct                                                                                                                                                                                                                             <  1:346873‑M2/274‑3 (MQ=255)                                            cgcATATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGAGGGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTc                                                                                                                                                                                                             <  1:76235/275‑1 (MQ=255)                                                                           gtCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCGTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCa                                                                                                                                                                              <  1:361340/274‑1 (MQ=255)                                                                                gcagAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCAtc                                                                                                                                                                                                                                                                             >  2:672790/1‑175 (MQ=255)                                                                                 cagAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTTACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTACTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGACACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTacac                                                                                                                                                                        <  1:708923/275‑1 (MQ=255)                                                                                 cagAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACNTAATATCGNCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGATTTAGTCCTTTGGCAAAATGCGTGTCCAGTacac                                                                                                                                                                        <  1:489361/275‑1 (MQ=255)                                                                                    agTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCAtcgtcg                                                                                                                                                                                                                                                                         <  1:672804/175‑1 (MQ=255)                                                                                           ggCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAACAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACAcncttttaccg                                                                                                                                                              >  2:283563/1‑267 (MQ=255)                                                                                                  gTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCAGTGTAACGCccagtc                                                                                                                                                       >  1:315133/1‑275 (MQ=255)                                                                                                                    aagaCTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTCCGGTaaa                                                                                                                                      >  2:158118/1‑274 (MQ=255)                                                                                                                            tGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTCCGGTAAAATTTCCGCa                                                                                                                             <  1:283568/275‑1 (MQ=255)                                                                                                                                                 cGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTTCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCTTCGCTGCCTTTTACTTCCTGCCAGCTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTCCGGTAAAATTTCCGCATACCTGATTGATTAGGGaaa                                                                                                         >  1:113778/1‑274 (MQ=255)                                                                                                                                                                       tatCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGctg                                                                                                                                                                                                                            <  1:116198‑M2/137‑4 (MQ=255)                                                                                                                                                                       tatCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATg                                                                                                                                                                                      >  1:644170/1‑175 (MQ=255)                                                                                                                                                                           gCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTg                                                                                                                                                                                                                        <  2:116197/137‑1 (MQ=255)                                                                                                                                                                           gCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCgtg                                                                                                                                                                                  <  2:644156/175‑1 (MQ=255)                                                                                                                                                                             ccgcgcCAACCTGCACCTGACGCCCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAACCCCGGCATCGTCGCTGCCTTTTACTTCCTGCCCGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTCCGGTAAAATTTCCGCATACCTGATTGATTTGGGAAAGCCATTGCTGAAACTCATTATCCACTGCg                                                                            <  2:299907/273‑1 (MQ=255)                                                                                                                                                                             aacagccaaccatcACCTGACGATCTACCTGCTCCATACGTGCCTGACCATTAAGCTGAAGACCGGGGTAAACCCCCGCATTGTCGCGGCCTTTTGCTCCCTGCATGTTGCGGGATAAATTCACCCCACTGGTTGTCACGGTACGCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTTCGGTAAAATTTCCGCATACCTGATTGATTTGGGAATGCCATTGCTGAAACTCATTATCCACTGCg                                                                            <  2:315128/262‑1 (MQ=255)                                                                                                                                                                                         gCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGNCAGGTGCGGGATAAATTCAGCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTCCGGTAAAATTTCCGCATACCTGATTGATTTGGGAAAGCCATTGCTGAAACTCATTATCCACTGCGGGGTTCATGGCa                                                                <  1:560197/275‑1 (MQ=255)                                                                                                                                                                                          cACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTCCGGTAAAATTTCCGCATACCTGATTGATTTGTCAAAGCCAGTGCTGAAACTGCTTAGCCAATGCggtttttttttccc                                                               >  2:560185/1‑263 (MQ=255)                                                                                                                                                                                           agcatgctccattCCTGCTCCATTATTGCCTGCCCACTTAGTTTATAATCGGTGTAAAACCAGGCATCGTCGCTTCCTTTTTCTTCCTGCCGGGTGCGGGATAAATTCACCCCGCAGGTTGTCACGGTTCTCAGGTTTAGTCTGTGGGTAAAAGGCGTGGACAGTACACCCGTGTAACGCTCACACAGCAAGCGTCCGGTAAAATTTCCGCATATCTGATTGATTTTGGAACGCCATTGCTGAGACTCATTATCCATTGCGGAGTTCATGGCa                                                                <  2:113777/261‑1 (MQ=255)                                                                                                                                                                                                    tCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGcggggtgaatttatcccgcacctgg                                                                                                                                                                                                                                                         >  1:227339‑M1/1‑54 (MQ=255)                                                                                                                                                                                                        ccTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGcggggtgaatttatcccgcacctggcagg                                                                                                                                                                                                                                                     <  2:227337‑M1/79‑30 (MQ=255)                                                                                                                                                                                                                attattGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGcggggtgaatttatcccgcacctggcaggaagta                                                                                                                                                                                                                                                >  1:389856‑M1/1‑42 (MQ=255)                                                                                                                                                                                                                 ttattGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGcc                                                                                                                                                                                                                                                      >  2:696792/1‑69 (MQ=255)                                                                                                                                                                                                                    ttGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGcggggtgaatttatcccgcacctggcaggaagtaaaag                                                                                                                                                                                                                                            <  2:389849‑M1/76‑39 (MQ=255)                                                                                                                                                                                                                     tGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGt                                                                                                                                                                                                                                                  <  1:696806/69‑1 (MQ=255)                                                                                                                                                                                                                      gCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTg                                                                                                                                                                                                                                                                      >  1:204544/1‑48 (MQ=255)                                                                                                                                                                                                                         tGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCAtcgt                                                                                                                                                                                                                                                                           >  2:665323/1‑40 (MQ=255)                                                                                                                                                                                                                          gACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCtt                                                                                                                                                                                                                                                                  <  2:204542/48‑1 (MQ=255)                                                                                                                                                                                                                           aCCACTAAGGTGAAAAACGGTGTAAAACCAGGCAACGTCGCTGCCTTTTACTTCCTGCAAGGTGCGGGATAAATTCACCCCGGGGGTTGTCACgg                                                                                                                                                                                                                  >  2:642957/1‑95 (MQ=255)                                                                                                                                                                                                                           aCCACTAAGCTGAAAAACGGTGTAAAACCAGGCAtcgtc                                                                                                                                                                                                                                                                          >  2:265691/1‑39 (MQ=255)                                                                                                                                                                                                                             cACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCt                                                                                                                                                                                                                                                                       <  1:665337/40‑1 (MQ=255)                                                                                                                                                                                                                               cTACGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACt                                                                                                                                                                                                              <  1:642971/95‑1 (MQ=255)                                                                                                                                                                                                                               cTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTg                                                                                                                                                                                                                                                                      <  1:265695/39‑1 (MQ=255)                                                                                                                                                                                                                                   gCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTCCGGTAAAATTTCCGCATACCTGATTGATTTGGGAAAGCCATTGCTGAAACTCATTATCCACTGCGGGGTTCATGGCACGTTTTCGCTCTGTGAAATGTATTTTTATTGTTGCATTtgtg                      <  1:158120/275‑1 (MQ=255)                                                                                                                                                                                                                                       aaaaaCGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCt                                                                                                                                                            >  1:68404/1‑137 (MQ=255)                                                                                                                                                                                                                                           aCGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCtcagt                                                                                                                                                        <  2:68403/137‑1 (MQ=255)                                                                                                                                                                                                                                              gtgtAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTCCGGTAAAATTTCCGCATACCTgattgatt                                                                                                                >  2:328136/1‑174 (MQ=255)                                                                                                                                                                                                                                                 gctttgttggCATCGTCGCTGTCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTTATGGTACTCAGCGTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTCCGGTAAAATTTCCGCATATCTGATTGATTTGGGAAAGCCATTGCTGAAACTCATTATCCACTTCGGGGTTCATGGCACGTTTTCGCTCTGTGAAATGTATTTTTATTGTTGCATTTGTGTTGCAATAAACGa         <  1:299180/266‑1 (MQ=255)                                                                                                                                                                                                                                                  aaaaCCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTCCGGTAAAATTTCCGCATACCTGATTGATTTggg                                                                                                            <  1:328142/174‑1 (MQ=255)                                                                                                                                                                                                                                                       ccggCATCGTCGCTTCCTTTTCTTTCTTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTCCGGTAAAATTTCCGCATACCTGATTGATTTGGGAAAGCCATTGCTGAAACTCATTATCCACTGCGGGGTTCATGGCACGTTTTCGCTCTGTGAAATGTATTTTTATTGTTGCATTTGTGTTGCAATAAACGAAGCTaa   <  1:175897/272‑1 (MQ=255)                                                                                                                                                                                                                                                       cAGcggggtgaatttatcccgcacctggcaggaagtaaaaggcagcgacgatgcctggttttacaccgtttttcagcttagtggtcaggcaataatggagcaggatgagcgtcaggtgcagattggcgctggcgata                                                                                                                                            <  1:116198‑M1/137‑135 (MQ=255)                                                                                                                                                                                                                                                        aGcggggtgaattgttcccgcacctggcaggaagtaaaaggcagcgacgattcctgtttttacaccgtttttcagcttattggtcaggcaataatggagcaggatgagcgtcaggtgcagattggcgctggcgatattacgttactcgatgcctcacgcccctgttcgctttactggcaggagtcttctaaacagatttcattacttttgccacgcactctgctggaacaatattttccccatcaaaaacctatctgcgcagaaagactggacg  <  1:346873‑M1/274‑273 (MQ=255)                                                                                                                                                                                                                                                         ggCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTaa                                                                                                                                                                >  1:85517/1‑115 (MQ=255)                                                                                                                                                                                                                                                         ggCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTCCGGTAAAATTTCCGCATAc                                                                                                                          >  2:163006/1‑153 (MQ=255)                                                                                                                                                                                                                                                         ggCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTCCGGTAAAATTTCCGCATACCTGATTGATTTGGGAAAg                                                                                                        >  2:149167/1‑171 (MQ=255)                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                 TGACTGAGTTGCACCATGGGTAAGTCAGCGTCCAGTCTTTCTGCGCAGATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTGTAAAACCAGGCATCGTCGCTGCCTTTTACTTCCTGCCAGGTGCGGGATAAATTCACCCCGCTGGTTGTCACGGTACTCAGCTTTAGTCCTTTGGCAAAATGCGTGTCCAGTACACCCGTGTAACGCTCAGTCAGCAGGCGTCCGGTAAAATTTCCGCATACCTGATTGATTTGGGAAAGCCATTGCTGAAACTCATTATCCACTGCGGGGTTCATGGCACGTTTTCGCTCTGTGAAATGTATTTTTATTGTTGCATTTGTGTTGCAATAAACGAAGCTAAT  >  CP009273/1441086‑1441606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.