New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2358776 =	38 (0.950)	4 (0.110)	3/294	NT	10.3%	coding (324/603 nt)	ais	putative LPS core heptose(II)‑phosphate phosphatase
	?	CP009273	2358869 =	34 (0.890)					coding (231/603 nt)	ais	putative LPS core heptose(II)‑phosphate phosphatase

GAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAACCATCCAGATAATCAGGTTTAAATGTCGCGTCACGCTTATCTTTAGCAATATATGTCAGGCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGC  >  CP009273/2358509‑2359040                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                         attgtctggttgcgcttgtctataggtggagtttacgtgttagctttttgccgctcttcgttgaagtcaaaaaaatatatcatcattttactggcgctcgctgcaattgccggactgggtactcatgccgcctggagtagcaatggtttgccacgtatcgacaataaaacactggccagactggcacagcagcacccggttgtcgttttgtttcgtcatgctgaacgttgcgaccgttcaaccaatcaatgcttgtcagataaaaaaGGTATTAc                                                                                                                                                                                                                                                                   <  1:353775‑M1/8‑1 (MQ=255)     tctggttgcgcttgtctataggtggagtttacgtgttagctttttgccgctcttcgttgaagtcaaaaaaatatatcatcattttactggcgctcgctgcaattgccggactgggtactcatgccgcctggagtagcaatggtttgccacgtatcgacaataaaacactggccagactggcacagcagcacccggttgtcgttttgtttcgtcatgctgaacgttgcgaccgttcaaccaatcaatgcttgtcagataaaaaaggtacagtccct                                                                                                                                                                                                                                                               <  1:234577‑M1/12‑9 (MQ=255)                  aaaCTTTGCCTTTTTCCACATGCATGACTAAACCATCCAGATAATCATGTTTAAATGTCGCGTCACGCTTATCTTTAGCAATATATGTCAGGCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGaaa                                                                                                                                                                                                                                                  <  1:461619/275‑1 (MQ=255)                               ttacacaTGCATGACTAAACCATCCAGATAATTAGGTTTAAATGTCGGGTCACGCTTGGCTTTAGCAATATATTTCAGGCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCGTTGCGTTGTAAGTCCTTAATTGCACTATAAATCTCAGTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGGCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATc                                                                                                                                                                                                                                       <  2:694246/270‑1 (MQ=255)                                tCCATATGCATGACTAAACCAGCCAGATAATCAGGTTTAAATGTCGAGTCAAGTTTATCTTTAGTAATATATGTCAGGCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGc                                                                                                                                                                                                                                    <  2:164657/275‑1 (MQ=255)                                                     tCCAGATAATCAGGTTTAAATGTCGCGTCACGCTTATCTTTAGCAATATATGTCAGGCAATGATTATGGGTGAAACTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACTGTCAATTTTTTACCCGCTGCAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACAGTAATAAAGATCGAAATAAGGTAAACNCTCACTAAACACCTTCCCCAGtac                                                                                                                                                                                                               >  2:429594/1‑273 (MQ=255)                                                       ctgATAATCATGTTTAAATGTCGCGTCACGCTTATCTTTAGCAATATATGTCAGGCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCa                                                                                                                                                                                                              <  1:260425/272‑1 (MQ=255)                                                          aTAATCAGGTTTAAATGTCGCGTCACGCTTATCTTTAGCAATATATGTCAGGCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACggg                                                                                                                                                                                                          >  1:11233/1‑275 (MQ=255)                                                                                    cattttactggcgctcgctgcaattgccggactgggtactcatgccgcctggagtagcaatggtttgccacgtatcgacaataaaacactggccagactggcacagcagcacccggttgtcgttttgtttcgtcatgctgaacgttgcgaccgttcaaccaatcaatgcttgtcagataaaacag                                                                                                                                                                                                                                                                          <  2:424662‑M1/1‑1 (MQ=255)                                                                                        ttactggcgctcgctgcaattgccggactgggtactcatgccgcctggagtagcaatggtttgccacgtatcgacaataaaacactggccagactggcacagcagcacccggttgtcgttttgtttcgtcatgctgaacgttgcgaccgttcaaccaatcaatgcttgtcagataaaacaGGTAt                                                                                                                                                                                                                                                                      >  1:424669‑M1/181‑185 (MQ=255)                                                                                                cAATATATGTCAGGCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTACTACCTGTTTTATCt                                                                                                                                                                    >  1:308123/1‑275 (MQ=255)                                                                                                  atatatGTCAGGCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCTCACTGAATAAGTCGTTTATCTACCGTAAATTTTTTACCCGCTGTAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTATTGTAATAAAGATCGACATCAGGGATATCAGCACTACAAGCTTTACCAAGTTAACCGCCATCCTTGGTACCTTTAACCGAAATACCTGTGTTATCtta                                                                                                                                                                  >  2:610235/1‑273 (MQ=255)                                                                                                  atatatGTCAGGCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGt                                                                                                                                                                                                                                                                        >  2:419666/1‑173 (MQ=255)                                                                                                   tatatGTAAAGCAATGATTATGGGTTAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACAGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTAGTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGAc                                                                                                                                                                 <  2:11233/275‑1 (MQ=255)                                                                                                      atGTCAGGCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTa                                                                                                                                                                                                                                                                    <  1:419673/173‑1 (MQ=255)                                                                                                             gCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATcc                                                                                                                                                                                                     >  1:346749/1‑229 (MQ=255)                                                                                                             gCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTAc                                                                                                                                                                                              >  2:157625/1‑236 (MQ=255)                                                                                                                 tGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTggg                                                                                                                                                                                                 <  2:346743/229‑1 (MQ=255)                                                                                                                 tGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCttt                                                                                                                                                                                          <  1:157627/236‑1 (MQ=255)                                                                                                                      ggtactcatgccgcctggagtagcaatggtttgccacgtatcgacaataaaacactggccagactggcacagcagcacccggttgtcgttttgtttcgtcatgctgaacgttgcgaccgttcaaccaatcaatgcttgtcagataaaacagg                                                                                                                                                                                                                                                                         <  1:52469‑M1/2‑1 (MQ=255)                                                                                                                         ggTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTg                                                                                                                                                                                                   >  1:600984/1‑219 (MQ=255)                                                                                                                          ctcatgccgcctggagtagcaatggtttgccacgtatcgacaataaaacactggccagactggcacagcagcacccggttgtcgttttgtttcgtcatgctgaacgttgcgaccgttcaaccaatcaatgcttgtcagataaaacaGGTAtt                                                                                                                                                                                                                                                                     >  2:52468‑M1/147‑152 (MQ=255)                                                                                                                            catgccgcctggagtagcaatggtttgccacgtatcgacaataaaacactggccagactggcacagcagcacccggttgtcgttttgtttcgtcatgctgaacgttgcgaccgttcaaccaatcaatgcttgtcagataaaacaGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACg                                                                                                                                                                                                            <  1:170576‑M1/63‑1 (MQ=255)                                                                                                                             aaaaTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTa                                                                                                                                                                                               <  2:600971/219‑1 (MQ=255)                                                                                                                             aaaaTAAAGATATTTTTATCCGGCGCGTTGCGTTTGAATTCCTTAATTGCACTATAAATCTCATTACCGAACTGAAGAAGTCGTTGATCTACCGTCAAGTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTACGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCa                                                                                                                                       <  2:308118/275‑1 (MQ=255)                                                                                                                                ccgcctggagtagcaatggtttgccacgtatcgacaataaaacactggccagactggcacagcagcacccggttgtcgttttgtttcgtcatgctgaacgttgcgaccgttcaaccaatcaatgcttgtcagataaaacaGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCa                                                                                                                                                                                                        >  2:170574‑M1/141‑207 (MQ=255)                                                                                                                                                 ggtttgccacgtatcgacaataaaacactggccagactggcacagcagcacccggttgtcgttttgtttcgtcatgctgaacgttgcgaccgttcaaccaatcaatgcttgtcagataaaacaGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACg                                                                                                                                                                                                            <  1:115126‑M1/63‑1 (MQ=255)                                                                                                                                                 aGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATc                                                                                                                                                                                                                                                      >  1:643154/1‑144 (MQ=255)                                                                                                                                                   gcgcTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCa                                                                                                                                                                                                                                   >  2:189943/1‑161 (MQ=255)                                                                                                                                                     tgccacgtatcgacaataaaacactggccagactggcacagcagcacccggttgtcgttttgtttcgtcatgctgaacgttgcgaccgttcaaccaatcaatgcttgtcagataaaacaGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCa                                                                                                                                                                                                        >  2:115125‑M1/120‑186 (MQ=255)                                                                                                                                                     gctttgctttGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGaaa                                                                                                                                                                                                                                                  <  2:643140/144‑1 (MQ=255)                                                                                                                                                       tttgctttgTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTaa                                                                                                                                                                                                                               <  1:189945/161‑1 (MQ=255)                                                                                                                                                             ttgTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCtt                                                                                                                                                                                           >  2:209924/1‑191 (MQ=255)                                                                                                                                                                tAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAANAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGt                                                                                                    >  1:616415/1‑275 (MQ=255)                                                                                                                                                                 aaGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAAc                                                                                                                                                                                       <  1:209926/191‑1 (MQ=255)                                                                                                                                                                              cACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGAAAAGCATTGATTGGTTGAACGGTCGCAACGTTAAGCATGACGAAACAAAACGACAACAGGGTGCTGCTGTGCCAgc                                                                                      >  2:175231/1‑274 (MQ=255)                                                                                                                                                                                 tataAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAAAGACAACAGGGTGCTGCTGTGCCAGTCTg                                                                                   >  1:179829/1‑275 (MQ=255)                                                                                                                                                                                                   cccggttgtcgttttgtttcgtcatgctgaacgttgcgaccgttcaaccaatcaatgcttgtcagataaaacagg                                                                                                                                                                                                                                                                         <  1:465000‑M1/2‑1 (MQ=255)                                                                                                                                                                                                      gaagaaTTCGTTTATCTACTGTAAATTTTTTACCCGATGAAAACCAGGTAGCCGACTGAATGGTCCGAAAGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGNCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATa                                                              <  1:610248/275‑1 (MQ=255)                                                                                                                                                                                                       gttgtcgttttgtttcgtcatgctgaacgttgcgaccgttcaaccaatcaatgcttgtcagataaaacaGGTAtt                                                                                                                                                                                                                                                                     >  2:464993‑M1/70‑75 (MQ=255)                                                                                                                                                                                                            gTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGt                                                                                                                                                                                                                 >  2:650953/1‑122 (MQ=255)                                                                                                                                                                                                               gTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCat                                                                                                                                                           >  2:720790/1‑173 (MQ=255)                                                                                                                                                                                                                tttATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCAc                                                                                                                                                                                                             <  1:650967/122‑1 (MQ=255)                                                                                                                                                                                                                tttATCGACCGTAAATTTTTTACCCGCGGAAAACCAGGTAGCCGACTGAATAGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAAc                                                    <  2:616402/275‑1 (MQ=255)                                                                                                                                                                                                                   aTCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCattgat                                                                                                                                                       <  1:720804/173‑1 (MQ=255)                                                                                                                                                                                                                      tACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATACTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTATGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGc                                              <  1:710714/275‑1 (MQ=255)                                                                                                                                                                                                                       aCCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCAAggt                                                                                                                                                                                                          >  1:39505/1‑117 (MQ=255)                                                                                                                                                                                                                           tCAATGTTTTACCCGTTGAAACCCATGTAGCCGACTGAATGGTCCGGGCGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATc                                                                                                                                                                                                      <  2:39504/118‑1 (MQ=255)                                                                                                                                                                                                                                  tttACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAggcgg                                  <  1:175233/275‑1 (MQ=255)                                                                                                                                                                                                                                  cgttgcgaccgttcaaccaatcaatgcttgtcagataaaacagg                                                                                                                                                                                                                                                                         <  2:334893‑M1/2‑1 (MQ=255)                                                                                                                                                                                                                                      gcgaccgttcaaccaatcaatgcttgtcagataaaacaGGTAtt                                                                                                                                                                                                                                                                     >  1:334899‑M1/39‑44 (MQ=255)                                                                                                                                                                                                                                                                 aTGGTCAGGACAGGAGTTATGGAAGAAAGATCTAAATCCGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCAGCGTTGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCG‑‑GCGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCagcgagc  <  2:257936/274‑1 (MQ=255)                                                                                                                                                                                                                                                                   ggTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCG‑‑ACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCagc      >  1:257939/1‑268 (MQ=255)                                                                                                                                                                                                                                                                          aCGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCat                                                                                                                                                           >  2:189430/1‑114 (MQ=255)                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                         GAATTCCCCATCCAGATAAACTTTGCCTTTTTCCACATGCATGACTAAACCATCCAGATAATCAGGTTTAAATGTCGCGTCACGCTTATCTTTAGCAATATATGTCAGGCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGC  >  CP009273/2358509‑2359040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.