New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3128772	51 (1.270)	8 (0.210)	5/292	NT	15.1%	coding (959/1500 nt)	pitB	phosphate transporter
	?	CP009273	= 3128845	42 (1.110)					coding (886/1500 nt)	pitB	phosphate transporter

ATGGTCATCGCTACACGACGCCAGCCAATCATGGTGCCAATGCCGAGCGCCAGTGCTACCGCCATGATGATCCACACCGGAGCGTACTCAATGGTGCTTAACATATCGCTGCGAAGTTTTTTCAGCAGGTTCTGGTCTTCTTTACTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGT  >  CP009273/3128505‑3129045                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                  aTGGTCATCGCTACACTACGCCAGCCAATCATGGTGCCAATGCCGAGCGCCAGTGCTACCGCCATGATGATCCACACCGGAGCGTACTCAATGGTGCTTAACATATCGCTGCGAAGTTTTTTGAGCAGCTTCTGGTCTTCTTTACTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAAc                                                                                                                                                                                                                                                                            <  1:638060/275‑1 (MQ=255)          gCTACACGACGCCAGCCAATCATGGTGCCAATGCCGAGCGCCAGTGCTACCGCCATGATGATCCACACCGGAGCGTACTCAANGGTGCTTANCATATCGCTGCGGAGTTTTTTCAGCAGGTTCTGGTCTTCTTTACTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCTTATTGCCTGGCAGCATCGTTTTAACGCGCGCAAt                                                                                                                                                                                                                                                                   <  1:480771/275‑1 (MQ=255)                                     ccAATGCCGAGCGCCAGTGCTACCGCCATGATGATCCACACCGGAGCGTACTCAATGGTGCTTAACATATCGCTGCGAAGTTTTTTCAGCAGGTTCTGGTCTTCTTTACTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATCATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCCTATTGCCTGGCAGCAACGTTTTAACGCGCGCAATAGCATCAAAGGTAATTGCCGGCTGaa                                                                                                                                                                                                                                         >  1:119180/1‑273 (MQ=255)                                             gAGCGCCAGTGCTACCGCCATGATGATCCACACCGGAGCGTACTCAATGGTGCTTAACATATCGCTGCGAAGTTTTTTCAGCAGGTTCTGGTCTTCTTTACTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAAc                                                                                                                                                                                                                                 >  1:337269/1‑274 (MQ=255)                                                          aCCGCCATGATGTTCCACACCGGAGCGTACTCAATGGTGCTTAACATATCGCTGCGAAGTTTTTTCAGCAGGTTCTGGTCTTCTTTACTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGactgatggcacgcaagtaacagagtttcactgtcatccggcaaatacctttgatgctattgcgc                                                                                                                                                                                                                   <  1:358069‑M1/275‑65 (MQ=255)                                                          aCCGCCATGATGATCCACACCGGAGCGTACTCAATGGTGCTTAACATATCGCTGCGAAGTTTTTTCAGCAGGTTCTGGTCTTCTTTACTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGactgatggcacgcaagtaacagagtttcactgtcatccggcaaatacctttgatgctattgcgc                                                                                                                                                                                                                   <  1:194908‑M1/275‑65 (MQ=255)                                                              ccATGATGATCCACACCGGAGCGTACTCAATGGTGCTTAACATATCGCTGCGAAGTTTTTTCAGCAGGTTCTGGTCTTCTTTACTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCa                                                                                                                                                                                                               <  2:337263/275‑1 (MQ=255)                                                                atgatgATCCACACCGGAGCGTACTCAATGGTGCTTAACATATCGCTGCGAAGTTTTTTCAGCAGGTTCTGGTCTTCTTTACTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCCGCTGGCTGCGCTGACTCACGCTTAACGGCCAGTAACTTTCCATATTGCCTGGCAGCATCGacagatggcacgcaaggaacagaggttcacggtcatcaggccacantctttgatgggagtgcgcagtcta                                                                                                                                                                                                             >  2:433597‑M1/1‑205 (MQ=255)                                                                    tgatCCACACCGGAGCGTACTCGATGGTGCTTAACATATCGCTGCGAAGTTTTTTCAGCAGGTTCTGATCTTCTTTACTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGGATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGactgatggcacgcaagtaacagagtttcactgtcatccggcaaatacctttgatgctattgcg                                                                                                                                                                                                                    <  1:433604‑M1/264‑64 (MQ=255)                                                                     gATCCAAACCGGAGCTTACTCAATGGTGCTTAACATATCGCTGCGAAGTTTTTTCAGCAGGTTCTGGTCTTCTTTACTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTcg                                                                                                                                                                                                        >  1:139256‑M2/1‑273 (MQ=255)                                                                                                 cTTAACATATCGCTGCGAAGTTTTTTCAGCAGGTTCTGGTCTTCTTTACTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATTCGGCGCCTCTGGCTGCGCTGACTCACGCTTAACGCCTCGTAACTTTCCATATTGTCTGGCAGCATCGTTTTAACGCGACCAATAGCAACAAAGGTATTTGCCGGATGACAGTGAAAATCTGTTACTTGCGTGCCATCATTCGATGCGCCAGGCAATGGAGGTTCCacagc                                                                                                                                                                            >  1:213990/1‑271 (MQ=255)                                                                                                    aaCATATCGCTGCGAAGTTTTTTCAGCAGGTTCTGGTCTTCTTTACTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTATTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGGTCCATCGCaa                                                                                                                                                                          >  1:450207/1‑274 (MQ=255)                                                                                                           cGCTGCGAAGTTTTTTCAGCAGGTTCTGGTCTTCTTTACTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGAAATCAACTTc                                                                                                                                                                  >  1:165046/1‑275 (MQ=255)                                                                                                                                                 cTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTNGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGa                                                                                                                             >  1:559380/1‑274 (MQ=255)                                                                                                                                                  tGACGTCTGTCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGAAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAg                                                                                                                           <  1:353632/275‑1 (MQ=255)                                                                                                                                                  tGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGactgatggcacgcaagtaacagagtttcactgtcatccggcaaatacctttgatgctat                                                                                                                                                                                                                        >  1:397575‑M1/1‑123 (MQ=255)                                                                                                                                                    aCGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAAc                                                                                                                                                                                                                                                                            >  1:28688/1‑128 (MQ=255)                                                                                                                                                      gCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGactgatggcacgcaagtaacagagtttcactgtcatccggcaaatacctttgatgctattgcg                                                                                                                                                                                                                    <  2:397568‑M1/182‑64 (MQ=255)                                                                                                                                                      gCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTaa                                                                                                                                                                                                                                                                             >  2:543897/1‑125 (MQ=255)                                                                                                                                                      gCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGCATTTGACGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTAAGGATGCTGTTGCAGGTAGTGTTGGAAGTTgg                                                                                                                       >  1:645009/1‑275 (MQ=255)                                                                                                                                                        cTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGCGATGCAGAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAGCGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAGTCAACTTCTGCGGCAGTTCAGGATGATGTTGCAGGTAGTGTTCGAAGTTGGTa                                                                                                                     <  1:439061/275‑1 (MQ=255)                                                                                                                                                        cTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAAcgcgc                                                                                                                                                                                                                                                                        <  2:28687/128‑1 (MQ=255)                                                                                                                                                         tGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTg                                                                                                                                                                                                                                     >  1:479956/1‑162 (MQ=255)                                                                                                                                                          ggCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAAcgcg                                                                                                                                                                                                                                                                         <  1:543908/125‑1 (MQ=255)                                                                                                                                                             aGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAAc                                                                                                                                                                                                                                 <  2:479947/162‑1 (MQ=255)                                                                                                                                                                       tcTTCGCGGAGGTATCATAGATGCCCAGAATAATGCGGCGCAGCTGGCTTCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGGAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGcgggta                                                                                                      <  1:402035/274‑1 (MQ=255)                                                                                                                                                                         tgcgcgGAGGTATAAGAGATGCACCGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGcgggtac                                                                                                     <  2:644995/272‑1 (MQ=255)                                                                                                                                                                                            tGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGa                                                                                  <  1:100070/274‑1 (MQ=255)                                                                                                                                                                                                      aaTGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTcgatgctg                                                                                                                                                                                                  <  2:373840‑M2/152‑9 (MQ=255)                                                                                                                                                                                                          cggcgCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAgg                                                                                                                                                                                              <  1:373847/152‑1 (MQ=255)                                                                                                                                                                                                           ggcgCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCCTCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGATCAGGATGCTGTTGCAGGTTGTGTTGGAAGTGGGTAACGGCATCGCCGGTACGGGGAATTTCATAACCGTACGCATACATCATgaca                                                                  >  1:218872/1‑274 (MQ=255)                                                                                                                                                                                                           ggcgCAGCTGGCTGCGCTGACTCACGCTTAACGGCTAGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTg                                                                                                                                                                                                                                     >  1:260426/1‑112 (MQ=255)                                                                                                                                                                                                             cgcAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGa                                                                                                                                                                                                                                    >  2:235469/1‑111 (MQ=255)                                                                                                                                                                                                             cgcAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAg                                                                                                                                    >  1:378019/1‑207 (MQ=255)                                                                                                                                                                                                             cgcAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTAATAGCCGGACGCATTCATATTgacgaa                                                                >  1:136844/1‑274 (MQ=255)                                                                                                                                                                                                               cAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAAc                                                                                                                                                                                                                                 <  2:260423/112‑1 (MQ=255)                                                                                                                                                                                                                 gctggctgCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAAct                                                                                                                                                                                                                                <  1:235471/111‑1 (MQ=255)                                                                                                                                                                                                                 gctggctgCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGtt                                                                                                                                <  2:378012/207‑1 (MQ=255)                                                                                                                                                                                                                  ctggctgCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTg                                                                                                                                                                                                                                                  >  1:113844/1‑92 (MQ=255)                                                                                                                                                                                                                  ctggctgCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGCAGTTGGTCACGGCATCGCGGGTACGGGTAATTTAATAGCCGGAAGCAATCATATTGACGACAAAg                                                            >  1:65298/1‑274 (MQ=255)                                                                                                                                                                                                                      ctgCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACTCGCGCAATAGCATCAAAGGTATTTGCCgg                                                                                                                                                                                                                                              <  2:113843/92‑1 (MQ=255)                                                                                                                                                                                                                       tgCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTTCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGCGGtt                                                                                                                                                                                   >  1:381939/1‑150 (MQ=255)                                                                                                                                                                                                                       tgCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAAcgcgcg                                                                                                                                                                                                                                                                       >  2:713706/1‑66 (MQ=255)                                                                                                                                                                                                                           cggaatCACTCTTAACGGCTCGTAACCTTCCATATTGCCTGGCAGCATCGTTTTAACGCTCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAACCTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCAt                                                                                                                                                                               <  2:381932/145‑1 (MQ=255)                                                                                                                                                                                                                           cTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAAt                                                                                                                                                                                                                                                                   <  1:713720/66‑1 (MQ=255)                                                                                                                                                                                                                            tGATTCACGTNTGACGGCTCGTAACTTTCCATCTTGCCTGGCAGCATCTTTTTAACGCGCGCAAGAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCGGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAgggg                                                  <  2:65297/274‑1 (MQ=255)                                                                                                                                                                                                                               ttctcgtttAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTGAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGCTGCTGTAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTGACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCaa                                               <  1:645329/267‑1 (MQ=255)                                                                                                                                                                                                                                    gCTTAACTGCTCGTAACTTTCCAGATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGNAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCcca                                         <  1:609384/275‑1 (MQ=255)                                                                                                                                                                                                                                      ttAACGGATCGGAACTGTCGATATTGCGTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCAGCAGTCGATGCTGCAGGCAATGGAGGTTACATCGCAAGCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCccac                                        <  2:244136/274‑1 (MQ=255)                                                                                                                                                                                                                                        aaCGGCTCGTAACTTGCCATATTGCCTGCAAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTNCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCccaccac                                     >  1:502254/1‑274 (MQ=255)                                                                                                                                                                                                                                              tctgcaCTTCCCCTATTGCTTTTCAGAATCGTTTTAACGCGCGCAATAGCATCACAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTTCCATCAGTTGATGCTGCAGGCAATGGAGGTTACATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTTGTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCAGATTGTCGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAg                               <  2:136843/270‑1 (MQ=255)                                                                                                                                                                                                                                                        ccATATTGCCTGGCAGCATCGactgatggcacgcaagtaacagagtttcactgtcatccggcaaatacctttgatgctatt                                                                                                                                                                                                                       >  1:5992‑M1/1‑21 (MQ=255)                                                                                                                                                                                                                                                         cATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCgg                                                                                                                                                                                                                                              >  2:87796/1‑57 (MQ=255)                                                                                                                                                                                                                                                            atTGCCTGGCAGCATCGactgatggcacgcaagtaacagagtttcactgtcatccggcaaatacctttgatgctattgcgc                                                                                                                                                                                                                   <  2:5992‑M1/81‑65 (MQ=255)                                                                                                                                                                                                                                                             ttGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGa                                                                                                                                                                                                                                          <  1:87797/57‑1 (MQ=255)                                                                                                                                                                                                                                                              tGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGa                                                                                                                                                                                                                                    >  2:482151/1‑62 (MQ=255)                                                                                                                                                                                                                                                                ccTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCt                                                                                                                                                                 >  1:588928/1‑127 (MQ=255)                                                                                                                                                                                                                                                                  tGGCAGCATCGTTTTAACGCGCGCAATAGCATCAATGGTATTTGCCGGATGACAGTGAAAct                                                                                                                                                                                                                                <  1:482160/62‑1 (MQ=255)                                                                                                                                                                                                                                                                  tGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTg                                                                                                                                                                                                                                     >  1:694190/1‑57 (MQ=255)                                                                                                                                                                                                                                                                    gcagcaTCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCgg                                                                                                                                                             <  2:588915/127‑1 (MQ=255)                                                                                                                                                                                                                                                                     cagcaTCGactgatggcacgcaagtaacagagtttcactgtcatccggcaaatacctttgatgctattgcgcgcgttaaaacgatgctgccaggcaatatggaaagttacgagccgttaagcgtgagtcagcgcagccagctgcgccgcatt                                                                                                                                   <  2:373840‑M1/152‑145 (MQ=255)                                                                                                                                                                                                                                                                      agcaTCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAAc                                                                                                                                                                                                                                 <  2:694176/57‑1 (MQ=255)                                                                                                                                                                                                                                                                        caTCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTg                                                                                                                                                                >  1:34346/1‑120 (MQ=255)                                                                                                                                                                                                                                                                          tCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGTGGGTACGGGTAATTTCATAGCCg                                                                                    >  1:447590/1‑194 (MQ=255)                                                                                                                                                                                                                                                                           cGactgatggcacgcaagtaacagagtttcactgtcatccggcaaatacctttgatgctattgcgcgcgttaaaacgatgctgccaggcaatatggaaagttacgagccgttaagcgtgagtcagcgcagccagctgcgccgcattatgctgtgcatctctgatacctccgcgaagctagcgaaactgccaggcgtcagtaaagaagaccagaacctgctgaaaaaacttcgcagcgatatgttaagcaccattgagtaagctccggtttggatc  >  1:139256‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                            gTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGc                                                                                                                                                            <  2:34345/120‑1 (MQ=255)                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                  ATGGTCATCGCTACACGACGCCAGCCAATCATGGTGCCAATGCCGAGCGCCAGTGCTACCGCCATGATGATCCACACCGGAGCGTACTCAATGGTGCTTAACATATCGCTGCGAAGTTTTTTCAGCAGGTTCTGGTCTTCTTTACTGACGCCTGGCAGTTTCGCTAGCTTCGCGGAGGTATCAGAGATGCACAGCATAATGCGGCGCAGCTGGCTGCGCTGACTCACGCTTAACGGCTCGTAACTTTCCATATTGCCTGGCAGCATCGTTTTAACGCGCGCAATAGCATCAAAGGTATTTGCCGGATGACAGTGAAACTCTGTTACTTGCGTGCCATCAGTCGATGCTGCAGGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGT  >  CP009273/3128505‑3129045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.