New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	270925 =	39 (0.970)	3 (0.080)	3/286	NT	7.4%	noncoding (385/1221 nt)	IS30	repeat region
	?	CP009273	271602 =	39 (1.050)					noncoding (1062/1221 nt)	IS30	repeat region

AAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGAT  >  CP009273/270661‑271196                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                agcacaaacgggcttttctccacgcccacctgctgcatcgggatcagcgctgccagcacaaacacggtgccgataaagaaaataatcagtcgcgcgatggtagtacgaatcgctaccgggataactttgcgcgggttttccgtttcaccggcggcaatgccgataagctcggtacccgaaaaagcaaagttcactgccaccatagtcatcaaaatcggtaagccaccgtgcgggaaacagccttctgccgtgatattactcagcCCCGGCGCgg                                                                                                                                                                                                                                                                        <  1:231801‑M1/10‑1 (MQ=255)       cTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTg                                                                                                                                                                                                                                                                 >  1:180365/1‑275 (MQ=255)                   caccaTGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAg                                                                                                                                                                                                                                                     <  1:13395/275‑1 (MQ=255)                                  tGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACtt                                                                                                                                                                                                                                            >  1:106996/1‑269 (MQ=255)                                      tcctgcTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCa                                                                                                                                                                                                                                        <  2:106995/264‑1 (MQ=255)                                          tCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATCACTCATGATGAACCCTGTTCTATGGCTCCAGCTGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCCCCCGCTATTAAGCTCCAGCCGCGGCCATCTGCGTCTGTTGCAGTGTTGACTTTGCATTCTGTTacc                                                                                                                                                                                                                              >  1:384975/1‑273 (MQ=21)                                               tCCATGCGGGACAAGAAAATCGCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTACGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAAcg                                                                                                                                                                                                                         <  1:13352/275‑1 (MQ=255)                                               tCCAGGCGGGACAAGATAATCTCTTTTCTGGTCTGACGGCGCTTACTGCGGAATTCACTGTCGGCGAAGGTTAGTTTATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGGTCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAAcg                                                                                                                                                                                                                         <  2:180363/275‑1 (MQ=255)                                                           aaGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGcc                                                                                                                                                                                                                                                                                >  2:61632/1‑208 (MQ=255)                                                               aaaTCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGgc                                                                                                                                                                                                                                                                            <  1:61633/208‑1 (MQ=255)                                                                  tctcTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGTTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGTTCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTCTAAGCTGACGGCCCTTTTTGTATCTGATTCTTCATCCCCACCCGCTATTAAACTCCCGGCGCGGGCATCTGCGTCTGGTGCa                                                                                                                                                                                                                                                      >  1:638298/1‑227 (MQ=21)                                                                                              gttgAATTCATTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATATCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAGTCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGa                                                                                                                                                                          <  1:263698/273‑1 (MQ=255)                                                                                                         tGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCTGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACa                                                                                                                                                                                                                             >  2:162075/1‑213 (MQ=255)                                                                                                             ggCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCTGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAAcg                                                                                                                                                                                                                         <  1:162077/213‑1 (MQ=255)                                                                                                                                tgcgcgggttttccgtttcaccggcggcaatgccgataagctcggtacccgaaaaagcaaagttcactgccaccatagtcatcaaaatcggtaagccaccgtgcgggaaccagccttctgccgtgatattactcagcCCCGGCGCggg                                                                                                                                                                                                                                                                       <  1:137773‑M1/11‑1 (MQ=255)                                                                                                                                       tgaACCCTGTTCTATGGCTCCAGATNACAAACATGATCTCATATATGGGACTTGTTCGCACCTGCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTACCAAACGCGGTATAACAAACCTTCTTTgg                                                                                                                                                                                                   <  1:558644/209‑1 (MQ=255)                                                                                                                                           cccggttcgtgggCTCCAGATGACAAACATGATGTCATATGAGGGATGTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATGATTAATCCCCGCCCGCTATTAAGCGCCGGGCGCGGGCATGTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGca                                                                                                                              <  1:185132/263‑1 (MQ=255)                                                                                                                                              tGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAATCGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACaa                                                                                                                           >  1:372887/1‑274 (MQ=255)                                                                                                                                                ttCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATg                                                                                                                                                                >  1:679272/1‑235 (MQ=255)                                                                                                                                                 tcaccggcggcaatgccgataagctcggtacccgaaaaagcaaagttcactgccaccatagtcatcaaaatcggtaagccaccgtgcgggaaccagccttctgccgtgatattactcagcCCCg                                                                                                                                                                                                                                                                              <  1:267477‑M1/4‑1 (MQ=255)                                                                                                                                                 tcaccggcggcaatgccgataagctcggtacccgaaaaagcaaagttcactgccaccatagtcatcaaaatcggtaagccaccgtgcgggaaccagccttctgccgtgatattactcagcCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACaaa                                                                                                                                                                                                                           <  2:650598‑M1/55‑1 (MQ=255)                                                                                                                                                    aTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCaaa                                                                                                                                                            <  2:679258/235‑1 (MQ=255)                                                                                                                                                     tGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATCAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGTTGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATTCGACACTGAAACGCACAATGAAAAcg                                                                                                                   >  1:143401/1‑275 (MQ=255)                                                                                                                                                     cggcggcaatgccgataagctctgtacctgaaaaagcaaagttcactgccaccatagtcatcaaaatcggtaagccaccgtgcgggaaccagccttctgccgtgatattactcagcCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAAcgcg                                                                                                                                                                                                                       >  1:650612‑M1/117‑175 (MQ=255)                                                                                                                                                     cggcggcaatgccgataagctcggtacccgaaaaagcaaagttcactgccaccatagtcatcaaaatcggtaagccaccgtgcgggaaccagccttctgccgtgatattactcagcCCCGgcgc                                                                                                                                                                                                                                                                          >  2:267473‑M1/117‑124 (MQ=255)                                                                                                                                                             gATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCTGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAACCAAAACAACAAAATACGCCACCAAAGCCAACACTGAANAcgagcaaccg                                                                                                           >  2:62749/1‑267 (MQ=255)                                                                                                                                                              aTGACAAACATGATCTCANATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCAt                                                                                                                                                                                   <  1:556625/202‑1 (MQ=255)                                                                                                                                                                                ccgaaaaagcaaagttcactgccaccatagtcatcaaaatcggtaagccaccgtgcgggaaccagccttctgccgtgatattactcagcCCCGGCGCggg                                                                                                                                                                                                                                                                       <  2:708366‑M1/11‑1 (MQ=255)                                                                                                                                                                                      ggACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGt                                                                                                                                                                                               >  1:304362/1‑166 (MQ=255)                                                                                                                                                                                          ttGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAg                                                                                                                                                                                           <  2:304357/166‑1 (MQ=255)                                                                                                                                                                                             ttCGTACCTTCCGGATGCGTTATGGGCTGGCTGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGca                                                                           <  1:62750/275‑1 (MQ=255)                                                                                                                                                                                                 cACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCATCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGggcggc                                                                                     <  1:457926/261‑1 (MQ=255)                                                                                                                                                                                                        ccatagtcatcaaaatcggtaagccaccgtgcgggaaccagccttctgccgtgatattactcagcCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGAATAttc                                                                <  1:300414‑M1/210‑1 (MQ=255)                                                                                                                                                                                                                        tGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGCTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGCTGTTTAGATGTCCATACGTGTAGAAGGTGATATGAAAACAACACAACAAAATGCGCCACTGAAGCGCACAATTAAAACGCGTCACCTACTACTTCTCTCCTTGGGAGGCGTGATTGGCACAGGATTATTCTTTACTACCggtttca                                                >  2:627101/1‑270 (MQ=255)                                                                                                                                                                                                                         ggtggcCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTAca                                                <  1:377647/271‑1 (MQ=255)                                                                                                                                                                                                                          ggtgcCCGTTTTGTCGCTGATTATTAATCTCCACCCGCTATTAAGCGCCCGGTTCTGGCATCGGCGTCTGTTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTAGAACAAACCTTCTTTGGATGTTTAGATGTCCATACGGTTAGAAGGTTATCTGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTAca                                                <  2:332445/270‑1 (MQ=255)                                                                                                                                                                                                                          gcggcCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTTTTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATTCAAACAACACAACAACATTCTCCACTAAAGCGCACAAAGAAACAACATCACATAATAAAGCATTCGTTGGGCGGCTCGATTGGAACAAANTTATTATTCAAAAcatctaacatc                                              >  2:423844/1‑265 (MQ=255)                                                                                                                                                                                                                                            gATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGa                               >  1:375509/1‑272 (MQ=255)                                                                                                                                                                                                                                             attattAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGAtt                                                                               >  1:210923/1‑223 (MQ=255)                                                                                                                                                                                                                                             attattAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAgg                                                                       >  1:194949/1‑231 (MQ=255)                                                                                                                                                                                                                                                 ttaATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGca                                                                           <  2:210921/223‑1 (MQ=255)                                                                                                                                                                                                                                                 ttaATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGatta                                                                   <  2:194947/231‑1 (MQ=255)                                                                                                                                                                                                                                                    ataagggaaagatATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGaa                     <  1:298263/262‑1 (MQ=255)                                                                                                                                                                                                                                                       cccACCCGCTATTAAGCGCCCGGCGCGGGCATCTATGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACa                                                                                                                                                                                                                             >  1:493036/1‑71 (MQ=255)                                                                                                                                                                                                                                                           cccGCTATTAAGCGCCCGGCGCGGGCATCTGTGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAAcg                                                                                                                                                                                                                         <  2:493027/71‑1 (MQ=255)                                                                                                                                                                                                                                                               cTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACa                                                                                                                                                                                                                             >  2:722188/1‑63 (MQ=255)                                                                                                                                                                                                                                                                tATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCt         >  1:4187/1‑274 (MQ=255)                                                                                                                                                                                                                                                                   tAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAAcg                                                                                                                                                                                                                         <  1:722202/63‑1 (MQ=255)                                                                                                                                                                                                                                                                         CCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGTTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAAAGCGTCACCTGATTATGTTTTCCTTGGGCGGCGCGATTGGCACAGGATTATTCTGTAATACCGGGTACATCATTTCGCCCCCTGGAGCGGTGGGGAcgctggtggcgttgtcggn  <  2:316167‑M1/272‑10 (MQ=255)                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                AAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGAT  >  CP009273/270661‑271196

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.