New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 367213	NA (NA)	43 (1.070)	33/310	NT	100%	noncoding (1223/1223 nt)	IS30	repeat region
	?	CP009273	879009 =	0 (0.000)					intergenic (‑165/‑120)	ybjG/mdfA	undecaprenyl pyrophosphate phosphatase/multidrug efflux system protein

GCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCTGGCGGAAATCAAAGCGCAAACCCTGATTGTCTGGGGGCGCAACGACCGCTTTGTGCCGATGGATGCGGGTCTGCGTCTGCTGTCCGGCATTGCCGGTTCTGAACT  >  CP009273/366949‑367470                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                  gCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGCACAAAGGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGAACGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATAGAAAGGGGGGAAGCATTG‑ACAGATTGAATCTACAATGGATAACt                                                                                                                                                                                                                                                         >  2:223619/1‑275 (MQ=255)                   aCTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGAAATCATCGTTTTTGATACCAga                                                                                                                                                                                                                                        >  2:194472/1‑273 (MQ=38)                                tcGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTTCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGc                                                                                                                                                                                                                          <  1:466401/274‑1 (MQ=255)                                               tCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATg                                                                                                                                                                                                                                                                <  1:311274/222‑1 (MQ=31)                                                cgtcGATCCGCAGAGTCCTTGGCAGCGGGGAAAAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAgcgcgc                                                                                                                                                                                                          <  1:361804/272‑1 (MQ=255)                                                 tgggATCCTCAGAGTCATTGGCAGCGGGGAACAAATGAGAACACAAAGGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCTGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAgcgcgc                                                                                                                                                                                                          <  1:648833/271‑1 (MQ=255)                                                  gCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAAAACAAATGGGCTAATTCGGAAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACATACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCt                                                                                                                                                                                                        <  1:733514/275‑1 (MQ=255)                                                                   tGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTcgc                                                                                                                                                                                       >  1:56906/1‑275 (MQ=255)                                                                         cGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGANATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCcgcg                                                                                                                                                                                 >  1:628653/1‑275 (MQ=255)                                                                               aCAAATGAGAACACAAATGGGCTAATACGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCNACAATGGANATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGc                                                                                                                                                                                             >  1:494879/1‑257 (MQ=255)                                                                                    tGAGAACACAAATGTGCTAATTCTGCAGTACTTTCCTAAAAAGACATGTCTTGCACAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTGTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGa                                                                                                                                                                       <  1:223621/274‑1 (MQ=255)                                                                                     gagaACACAAATTGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGaaa                                                                                                                                                                     <  1:194474/275‑1 (MQ=255)                                                                                                           gaaaGTACTTTCATAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGc                                                                                                                                               <  2:628639/272‑1 (MQ=255)                                                                                                                                 aTGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGATACCg                                                                                                                            >  1:350766/1‑272 (MQ=255)                                                                                                                                                 aCTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAAt                                                                                                                                                                                                                                                                 <  2:352407/123‑1 (MQ=11)                                                                                                                                                   tCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGCGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGNCCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAACCAGTTCCCGGATTTTGGCCCACGTCTGGCg                                                                                                       >  1:616329/1‑275 (MQ=255)                                                                                                                                                   tCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGACAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGTCCGACGCCCTGTTTGAAGCGCGcc                                                                                                                                                                                                         >  1:705295/1‑177 (MQ=255)                                                                                                                                                     aaCATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGAGTTGACCGACGCCCTGTTTGAAgc                                                                                                                                                                                                              >  1:651105/1‑170 (MQ=255)                                                                                                                                                       cATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaa                                                                                                                                                                                                     <  2:705281/177‑1 (MQ=255)                                                                                                                                                         tGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAgcgcgc                                                                                                                                                                                                          <  2:651091/170‑1 (MQ=255)                                                                                                                                                          gAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGAt                                                                                                                                                                                                                                              >  1:311755/1‑133 (MQ=255)                                                                                                                                                              tAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCa                                                                                                                                                                                                                                          <  2:311750/133‑1 (MQ=255)                                                                                                                                                               aGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGa                                                                                                                                                                                                                             >  2:159351/1‑145 (MQ=255)                                                                                                                                                               aGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGcc                                                                                                                                                                                                         >  2:358199/1‑165 (MQ=255)                                                                                                                                                                 agcTGGGTGCTGCTCAGCTAAACACCAGACCGAGAAAGACACTGAAGTTCAAAAAACCGAAAGAGTTAATAGCAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGTTACCAGCGATTTGCCCGACGCCCTGTTTGACGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTTGAAATCTTCGTTAAGCGCGTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCGGGCGGACATCAAAGcaca                                                                                         <  2:704879/273‑1 (MQ=37)                                                                                                                                                                 aTCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGCACACCGGGAAAACTTCGTTAAAAGCCTGGAAGCTAATCCGAAACAATACCCGGATTTTGGCCAACGTCCTGGGGAAATCcaacccta                                                                                         >  2:724535/1‑270 (MQ=37)                                                                                                                                                                   cTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGcc                                                                                                                                                                                                                         <  1:159353/145‑1 (MQ=255)                                                                                                                                                                   cTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaa                                                                                                                                                                                                     <  1:358205/165‑1 (MQ=255)                                                                                                                                                                      gTTGCTGCTCAGCTAGACAACAGGACGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGa                                                                                                                                                                                                                                               >  1:502559/1‑120 (MQ=255)                                                                                                                                                                      gTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAagag                                                                                                                                                        >  2:702650/1‑207 (MQ=255)                                                                                                                                                                         gaagatacgcaaaaaaaaaGACCGAGGAAAACACTAAAGTTAAAAAAACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATGTAATCTACAATTGATAGTTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAAAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCTGGCGGAAATCAAAGCGCAAACCCTGa                                                                                 <  2:616316/264‑1 (MQ=255)                                                                                                                                                                          ctgctCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATAcc                                                                                                                                                                                                                                           <  2:502550/120‑1 (MQ=255)                                                                                                                                                                          ctgctCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATCATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTg                                                                                                                                                    <  1:702664/207‑1 (MQ=255)                                                                                                                                                                                  cTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGat                                                                                                                                                                                                                                                             >  2:157620/1‑94 (MQ=35)                                                                                                                                                                                      acaacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCt                                                                                                                                                                                                                                                         <  1:157622/94‑1 (MQ=40)                                                                                                                                                                                          caGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGGGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCTGGCGGAAATCAAAGCACAAACCCTGATTGTCTGGGGGCGCAAc                                                                >  1:147350/1‑275 (MQ=255)                                                                                                                                                                                            gACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTg                                                                                                                     >  2:649262/1‑220 (MQ=255)                                                                                                                                                                                            gACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCTGGCGGAAATCAAAGAGCAAACCCTGATTGTCGGGGGGCGCAACGa                                                              >  1:16366/1‑275 (MQ=255)                                                                                                                                                                                            gACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGAGTTGCAATG‑ACAGATTGACTCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTGGAAGCGCGCTTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTACGAGCCTGGACGCTACTCAGAAACCGTTCGCGGCTTTTGGCCCACGTCTGGCGGAAAGCCAAGCGCAAGCCCCGCATGTCTGGGGGCGCaagcg                                                              >  2:95641/1‑272 (MQ=37)                                                                                                                                                                                                gagaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGccc                                                                                                                 <  1:649276/220‑1 (MQ=255)                                                                                                                                                                                                 agaAAGACACTGAAGGTCAAAACACCGAGAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTNGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCTGGCGGAAATCAAAGCGCAAACCCTGATTGTCTGGGGGCGCAACGACCGCt                                                         >  1:514935/1‑275 (MQ=255)                                                                                                                                                                                                    aaGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCAACTGGAAACCTTCGTTAAGAGCCTgg                                                                                                                                                   >  2:548594/1‑182 (MQ=255)                                                                                                                                                                                                        cacTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCCTTAAGAGCCTGGAAGc                                                                                                                                               <  1:548605/182‑1 (MQ=255)                                                                                                                                                                                                                ttaaaaaCACCCAAAGTGGTTATTCAAATGGGTGTTTCATTGCACA‑TTTGAATCTGCAATGGTTTTCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCTGGCGGAAATCAAAGCGCAAACCCTGATTGTCTGGGGGCGCAACGACCGCTTTGTGCCgatggatg                                          <  2:16366/272‑1 (MQ=255)                                                                                                                                                                                                                                              ggTGTTTTATTT‑ACAGATTGAATCTACAATGGATATCTTTGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGAGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCTGGCGGAAATCAAAGCGCAAACCCTGATTGTCTGGGGGCGCAACGACCGCTTTGTGCCGATGGATGCGGGTCTGCGTCTGCTGTCCGGCATTGc              <  1:98251/273‑1 (MQ=255)                                                                                                                                                                                                                                                tgtTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCTGGCGGAAATCAAAGCGCAAACCCTGATTGTCTGGGGGCGCAACGACCGCTTTGTGCCGATGGATGCGGGTCTGCGTCTGCTGTCCGGCCTTGCCgg           >  1:228000/1‑274 (MQ=255)                                                                                                                                                                                                                                                           aCAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCTGGCGGACATCAAAGCGCAAACCCTGATTTTCTGGGGGCGCAACGACACCTTTGTGCCGATTGATGCGGGTCTGCGTCTGCACTCCTGCATTGCCGTTTTTTAACt  >  2:571833/1‑273 (MQ=255)                                                                                                                                                                                                                                                           aCAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCTGGCGGAAATCaa                                                                                               >  1:70860/1‑180 (MQ=255)                                                                                                                                                                                                                                                               aTTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCTGGCGGAAATCAAAgcg                                                                                           <  2:70859/180‑1 (MQ=255)                                                                                                                                                                                                                                                                       tACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCTGGCGGAAATCAAAGCGCAAAcc                                                                                     >  2:251248/1‑178 (MQ=255)                                                                                                                                                                                                                                                                         cAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGccc                                                                                                                                                                                                                        >  2:409915/1‑45 (MQ=255)                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                  GCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTG‑ACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCTGGCGGAAATCAAAGCGCAAACCCTGATTGTCTGGGGGCGCAACGACCGCTTTGTGCCGATGGATGCGGGTCTGCGTCTGCTGTCCGGCATTGCCGGTTCTGAACT  >  CP009273/366949‑367470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.