New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 895186	38 (0.950)	7 (0.200)	4/272	NT	21.8%	noncoding (35/98 nt)	RIP82 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP82 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
	?	CP009273	= 896203	17 (0.480)					intergenic (‑172/+119)	artJ/artM	arginine binding protein, periplasmic/arginine transporter subunit

CTGTGTGATTATCTCTCAACGATGGCACCGCGTTTTATCATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCGGTGCCAAAATATTGCGGATCGGTC  >  CP009273/894922‑895447                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                      cTGTGTGATTATCTCTCAACGATGGCACCGCGTTTTATCATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGACGCAATAAAAAAGACGCATGGGCGGCTTCAGATTGCTGACAAAGTGCGCGGTGTTGATGCAGGATGGGGCGTAAACGCCGTATCCGGCCCACaaaaactttc                                                                                                                                                                                                                                                              >  2:592186/1‑268 (MQ=255)                          cACCGCGTTTTATCATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTTCATGGGCCATg                                                                                                                                                                                                                                    >  1:431674/1‑275 (MQ=255)                          aaCCGCGTTTTTTCCTACACTCCAGCTGTAACGCACAAACTATGGCGAAAGATATCCGCGAACTGCCTGGATTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCGTGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATg                                                                                                                                                                                                                                    <  2:694144/274‑1 (MQ=255)                                          cTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAACCGCCTTATCAGGCCTACAAAAGCGTGCAAATTAAATACATTGCATGGGACATGTaatccttttaatc                                                                                                                                                                                                                      >  2:607295/1‑261 (MQ=255)                                                                    tGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCaa                                                                                                                                                                                                      >  2:219352/1‑263 (MQ=255)                                                                     ggCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCa                                                                                                                                                                                                                                             >  2:542959/1‑223 (MQ=255)                                                                        gAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtttt                                                                                                                                                                                                  <  1:219354/263‑1 (MQ=255)                                                                         aaaGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAATAGCGTGCAAATTCAATACATTGCATggg                                                                                                                                                                                                                                         <  1:542970/223‑1 (MQ=255)                                                                                            cggggTTTCGTCGTTAACGGGGTCAGGTAGTCCAGATGTTCCCGCCGACCGCGCCCTAGGAAGGGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGGGCGGAGTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCAGGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCg                                                                                                                                                                  <  2:683623/273‑1 (MQ=21)                                                                                            cTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGc                                                                                                                                                                                                                                                                  >  1:14931/1‑179 (MQ=255)                                                                                                gTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGc                                                                                                                                                                                                                                                              <  2:14931/179‑1 (MQ=255)                                                                                                           aaCGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGCAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGc                                                                                                                                                                                                                                                                  >  2:383439/1‑164 (MQ=255)                                                                                                             cGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGc                                                                                                                                                                                                                               <  1:111738/197‑1 (MQ=255)                                                                                                             cGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGc                                                                                                                                                                                                                               >  2:111737/1‑197 (MQ=255)                                                                                                             aggtttcAGTTTTTCGATATGTTCCCGCATTCCGCGCACTATGAAGTGCTGACGCTGCTGGTGAATCAATAAAAAAGCCGCATGTGCGGCTNCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAACCCGCGGTTGCGGCTTTCTGAATCTTACt                                                                                                                                                 <  1:552329/269‑1 (MQ=255)                                                                                                               ggTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGc                                                                                                                                                                                                                                                              <  1:383446/164‑1 (MQ=255)                                                                                                                gTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATACGGCCTANAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTCGGCCTGATAAGCGTAGCGCATCAGGCAATTATACCCTTTTCATCAGTATCAATCCGCCGTTGCGGCTTTCTGAACTTTACt                                                                                                                                                 >  1:629688/1‑272 (MQ=38)                                                                                                                          tCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTTCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTAACTTTGTAATACGGCTCAAGCCGAGGTTGCGGCTTTCTGAATCTTANTTTGGGAACCAcct                                                                                                                                    >  2:552318/1‑273 (MQ=255)                                                                                                                                tGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCaa                                                                                                                                                                                                                                                      >  1:10944/1‑155 (MQ=255)                                                                                                                                    cccGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACa                                                                                                                                                                                                                                                  <  2:10944/155‑1 (MQ=255)                                                                                                                                                              tGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCATGGGCCCTGTAGGCCTGCTAAGCGTAGCGCATCCGGCAATTTTCCCTTTGTCATCAGTCTCAATCCGCGGTTTCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTAACGTCAGATTTAAt                                                                                                >  1:411302/1‑275 (MQ=255)                                                                                                                                                                                aaTAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCa                                                                                                                                                                                                                                             >  1:591251/1‑116 (MQ=255)                                                                                                                                                                                    aaaaaGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATggg                                                                                                                                                                                                                                         <  2:591238/116‑1 (MQ=255)                                                                                                                                                                                         gCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACA                                                                                                                                                                                                                                                                       >  1:6893‑M1/1‑81 (MQ=255)                                                                                                                                                                                             cATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGCTGCGGCCTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATACGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGTTTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCTCCGTGTTCTCCATTTTTTcac                                                                   >  2:135980/1‑271 (MQ=37)                                                                                                                                                                                             cATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAg                                                                                                                                                                                                                                                                   <  2:6893/81‑1 (MQ=255)                                                                                                                                                                                                     gCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACa                                                                                                                                                                                                                                                  >  1:478720/1‑90 (MQ=255)                                                                                                                                                                                                       ttgaGACTGATGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCa                                                                                                                                                                                                                                             >  1:308066/4‑93 (MQ=255)                                                                                                                                                                                                       ttgaGACTGATGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCa                                                                                                                                                                                                              >  1:239056/4‑124 (MQ=255)                                                                                                                                                                                                         cAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGc                                                                                                                                                                                                                                              <  2:478711/90‑1 (MQ=255)                                                                                                                                                                                                           gactgatGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAg                                                                                                                                                                                                          <  2:239053/118‑1 (MQ=255)                                                                                                                                                                                                              tGCTGACAAAGTGCTCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCgg                                                <  1:592199/275‑1 (MQ=255)                                                                                                                                                                                                              tGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCCGCAGGGCTTTGTTATCCgg                                                <  1:607308/275‑1 (MQ=255)                                                                                                                                                                                                                cTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAtagtgcataaattcttataatgaagacgga                                                                                                                                                                                                                                         >  2:9344‑M1/1‑58 (MQ=255)                                                                                                                                                                                                                cTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAtagtgcataaattcttataatgaagacg                                                                                                                                                                                                                                           >  1:116210‑M1/1‑58 (MQ=255)                                                                                                                                                                                                                cTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAtagtgcataaattcttataatgaagacg                                                                                                                                                                                                                                           >  2:74806‑M1/1‑58 (MQ=255)                                                                                                                                                                                                                    cAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAtagtgcataaattcttataatgaagacggacaac                                                                                                                                                                                                                                     <  1:9344‑M1/88‑35 (MQ=255)                                                                                                                                                                                                                    cAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAtagtgcataaattcttataatgaagacggaca                                                                                                                                                                                                                                       <  2:116209‑M1/86‑33 (MQ=255)                                                                                                                                                                                                                    cAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAtagtgcataaattcttataatgaagacggaca                                                                                                                                                                                                                                       <  1:74807‑M1/86‑33 (MQ=255)                                                                                                                                                                                                                    cAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTa                                           <  1:135981/274‑1 (MQ=255)                                                                                                                                                                                                                             cgTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGt                                                                                                                                  >  2:150254/1‑178 (MQ=255)                                                                                                                                                                                                                                 gttTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAtagtgcataaattcttataatgaagacggacaacccactaagttgtccgtcttttttatttcatttaaattatttaatcatgtttattgcatataaattcacttgatggcattgttatcccatgccgcagacacggccaaaaatcataagattgacagacgggagttccatcatgaaaaagttagttcttgcctctttacttgcttcctttactttcggtacttctgccgcaga                             >  1:722068‑M1/1‑41 (MQ=255)                                                                                                                                                                                                                                 gttTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACt                                                                                                                              <  1:150255/178‑1 (MQ=255)                                                                                                                                                                                                                                  tttATGCCGGATGCGGAGTAAACGCCTTATCCGCCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCTTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCCAGCCGCGGTTGCGGCTTTCTGAAt                                                                                                                                                       >  2:542466/1‑152 (MQ=255)                                                                                                                                                                                                                                      tGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATTGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGTCAATTTTACTTTTGTCATCAGTCTCTAGCCGCGGTTGCGGCTTTCTGCATCTTa                                                                                                                                                   <  1:542477/152‑1 (MQ=255)                                                                                                                                                                                                                                            aTGCGGCGTAAACGCATTATCCGACCTACTAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGAtt                                                                                                                          >  1:510669/1‑171 (MQ=255)                                                                                                                                                                                                                                                ggcgTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCAGGTAGGTCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGAtttttt                                                                                                                      <  2:510660/171‑1 (MQ=255)                                                                                                                                                                                                                                                            ttATCCGGCCTACAtagtgcataaattcttataatgaagacggacaacccactaagttgtccgtcttttttatttcatttaaattatttaatcatgtttattgcatataaattcacttgatggcattgttatcccatgccgcagacacggccaaaaatcataagattgacagacgggatttccatcatgaaaaagttatttcttgccgctttacttgcttcctttactttcggtgcttacgcccccgagaaaatcaattttggcttttcattcac  >  2:712859‑M1/1‑14 (MQ=255)                                                                                                                                                                                                                                                            gcaTCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACGGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTCAAGCGATGCCCAGGCCGGTGCCAAAATATTGAGAATCGGt   >  1:593218/3‑274 (MQ=255)                                                                                                                                                                                                                                                              aTCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAAt                                                                                                                                                                                                     >  1:283635/1‑78 (MQ=255)                                                                                                                                                                                                                                                                  ggCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTa                                                                                                                                                                                                 <  2:283630/78‑1 (MQ=255)                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                      CTGTGTGATTATCTCTCAACGATGGCACCGCGTTTTATCATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCGGTGCCAAAATATTGCGGATCGGTC  >  CP009273/894922‑895447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.