New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2645183 =	40 (1.000)	4 (0.100)	3/296	NT	10.4%	coding (464/4962 nt)	yfhM	bacterial alpha2‑macroglobulin colonization factor ECAM; anti‑host protease defense factor; periplasmic inner membrane‑anchored lipoprotein
	?	CP009273	2645291 =	31 (0.810)					coding (356/4962 nt)	yfhM	bacterial alpha2‑macroglobulin colonization factor ECAM; anti‑host protease defense factor; periplasmic inner membrane‑anchored lipoprotein

GCTGGCAGAGATTCTGGCTTAACGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACTTCAGAGAGATCCAGCAATGTCAGCACCTTACCGGCACTCTGTTGGGCCAGTTTTTGTCTCTCCGGCACGGAGAGTTTTGCTGAACTCGCGTTTTCTGAAGAGGCCGCTTTAGTAACTTCAGAAGGCGCATCTTTTTTCAC  >  CP009273/2645021‑2645565                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                   gCTGGCAGAGATTCTGGCTTAACGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGa                                                                                                                                                                                                                                                                                <  1:266022/275‑1 (MQ=255)                                          gACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGAGGGTAGTACTAGTTTTTTCGTAATCTTTACTGAAGGTGACGTTGTTGAGTGCTTTGACCTCCTTGCTAATAGTAACGATCAAATCACTTTTCGGTTCGAGGTGGCGCAACAGTAAATCGTTAAGATTATCTGACAGCCCCCAGGCCCCATCCACTTTCAAGCttttttttttt                                                                                                                                                                                                                                        >  2:710844/1‑270 (MQ=255)                                                    aCGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGTTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTg                                                                                                                                                                                                                                                                                 >  2:640085/1‑223 (MQ=255)                                                        tGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGATGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAg                                                                                                                                                                                                                                                                             <  1:640099/223‑1 (MQ=255)                                                         gAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCAACTTAGCCGCTTTTTTTATCGACCCCATGAATaat                                                                                                                                                                                                                          >  2:200991/1‑272 (MQ=255)                                                              ccATTACCGGCAGCCCTTCAACGACTTTGCCAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATNGTTTTTTCGTAATCTTTACCGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTgag                                                                                                                                                                                                                   <  1:568166/275‑1 (MQ=255)                                                                                  aCGACTTTGCCAGGCAGCAGCGAACCTCGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCgag                                                                                                                                                                                               <  1:200993/275‑1 (MQ=255)                                                                                        ttGCCAGGAAGCAGCGCACCACGGCTGGCAAAAACGACGCTGGGTTGGATGTTGCGGGTAGTTATAGTTTTTTCGTAATCTATACTGAAGGTTGCGTTGTTGAGTGCTTTGAACTCCTTGACAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGCCAGCTCCCAGGCACTATCCACTTTGCCGCTTTTTTTATAGACGACATGAATAACGCGTGCGAAATCATGATCCGGGTCgggaggga                                                                                                                                                                                          >  2:739003/1‑274 (MQ=255)                                                                                         tGCCAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTTACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTCTCCCCTACATGACTAAAGCGTGAAAAATCCTGAACCGGGTCTAGCGTGAt                                                                                                                                                                                         >  2:728333/1‑274 (MQ=255)                                                                                                          ccACGGCTGGCAAAACCGACGCTTGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAg                                                                                                                                                                       <  1:280230/275‑1 (MQ=255)                                                                                                              ggCTGGCAAAACCGACTCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGc                                                                                                                                                                      <  1:117991/272‑1 (MQ=255)                                                                                                               gCTGGCAAAACCTACTCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCTTAATCTTTACTGAAGGTTGCGTTGTTGCGTGCTTTGACCTCCGTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTTGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTGTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGTACCAGCGTgg                                                                                                                                                                  <  1:739017/275‑1 (MQ=255)                                                                                                                                                           attagagacagtCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACTTCAGAGAGATCCAGCAATGTCAg                                                                                                                       <  1:461097/263‑1 (MQ=255)                                                                                                                                                             ttttCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTcc                                                                                                                                                                                                                                                                         >  2:309539/1‑126 (MQ=255)                                                                                                                                                                 cGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAgg                                                                                                                                                                                                                                                                     <  1:309544/126‑1 (MQ=255)                                                                                                                                                                                    tGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATcg                                                                                                                                                                                                                                        >  2:552615/1‑136 (MQ=255)                                                                                                                                                                                        ttgttgAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATcgacga                                                                                                                                                                                                                                    <  1:552626/136‑1 (MQ=255)                                                                                                                                                                                           ttgAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAAcgcg                                                                                                                                                                                                                       >  2:376403/1‑146 (MQ=255)                                                                                                                                                                                            tgAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATcg                                                                                                                                                                                                                                        >  2:131883/1‑128 (MQ=255)                                                                                                                                                                                               gTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTgag                                                                                                                                                                                                                   <  1:376410/146‑1 (MQ=255)                                                                                                                                                                                               ctcgaaccgaaacgtgatttgatcgttactattggcaaggaggtcaaagcactcaacaacgcaaccttcagtaaagattaTCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAAt                                                                                                                                                                                                                             >  1:18945‑M2/81‑136 (MQ=255)                                                                                                                                                                                               ctcgaaccgaaacgtgatttgatcgttactattggcaaggaggtcaaagcactcaacaacgcaaccttcagtaaagattaTCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACTTCAGAGAGATcc                                                                                                                                  >  1:336780‑M2/81‑227 (MQ=255)                                                                                                                                                                                                tGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATcgacga                                                                                                                                                                                                                                    <  1:131884/128‑1 (MQ=255)                                                                                                                                                                                                tGCTTTGAACCCCTGGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATCATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCATGATCCGGGTCCACAGGGATGGAGAACGTCAGCACAAGCCTGCCTGCCCCATCAAGTAGGAATTCAGCGAGATCCAGAAATGTCAGCCCCTTACCGGACCCCTGTTGGGCCCGTTTTTGcctcc                                                                                 >  2:166202/1‑274 (MQ=255)                                                                                                                                                                                                   aaccgaaacgtgatttgatcgttactattggcaaggaggtcaaagcactcaacaacgcaaccttcagtaaagattaTCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAAcg                                                                                                                                                                                                                         <  2:18945‑M2/60‑1 (MQ=255)                                                                                                                                                                                                   aaccgaaacgtgatttgatcgttactattggcaaggaggtcaaagcactcaacaacgcaaccttcagtaaagattaTCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACTTCAGAGAGATCCAGCa                                                                                                                              <  2:336774‑M2/151‑1 (MQ=255)                                                                                                                                                                                                          tcctTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTAt                                                                                                                                                                                                                                          >  1:85908/1‑112 (MQ=255)                                                                                                                                                                                                            ctTGCCAATTCTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACTTCAGAGCGATCCAGCAATGTCAGCACCTTACCGGCCCTATATTGGGCCAGTTTTTGACCCTCCgtaccataca                                                                     >  1:736216/1‑266 (MQ=255)                                                                                                                                                                                                              tGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATc                                                                                                                                                                                                                                                                                   >  1:635928/1‑67 (MQ=255)                                                                                                                                                                                                              tGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATcgac                                                                                                                                                                                                                                      <  2:85907/112‑1 (MQ=255)                                                                                                                                                                                                                  aaTAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGAc                                                                                                                                                                                                                                                                               <  2:635914/67‑1 (MQ=255)                                                                                                                                                                                                                      gTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGGCGACATGAATAACGCGTGAGCAATCCTGATCCGGGTCGCGAGGGATGGAGAACGTCAggt                                                                                                                                                                           >  2:319769/1‑161 (MQ=255)                                                                                                                                                                                                                          cGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACGCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAg                                                                                                                                                                       <  1:319775/163‑1 (MQ=255)                                                                                                                                                                                                                              cAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACTTCAGAGAGATCCAGCAATGTCAGCACCTTACCGGCACTCTGtt                                                                                                   >  2:121665/1‑227 (MQ=255)                                                                                                                                                                                                                                  tCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACTTCAGAGAGATCCAGCAATGTCAGCACCTTACCGGCACTCTGTTGGGc                                                                                               <  1:121666/227‑1 (MQ=255)                                                                                                                                                                                                                                                   gTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACtt                                                                                                                                             <  1:466530/164‑1 (MQ=255)                                                                                                                                                                                                                                                      tctgaaaccgaaCGCTTTAAGGTTTTCTGGCAGCTCCCAGGCACCATCCACTTTGCCGTTTTTTTTAGCGACGACATGAATAACGCGTGAGAAATCCTGAGCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACTTCAGAGAGATCCAGCAATGTCAGCACCTTACCGGCACTCTGTTGGGCCAGTTTTTGTCTCTCCGGCACGGAGAGTTTTGCTGAACTCGCGTTTTCTGAAGAGGCCGCTTTAGTa                            <  2:736202/264‑1 (MQ=255)                                                                                                                                                                                                                                                                aaCTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACTTCAGAGAGAt                                                                                                                                    >  1:542584/1‑160 (MQ=255)                                                                                                                                                                                                                                                                    ctTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACTTCAGAGAGATCCAg                                                                                                                                <  2:542573/160‑1 (MQ=255)                                                                                                                                                                                                                                                                     tttAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACTTCAGAGAGATCCAGCAATGTCAGCACCTTACCGGCACTCTGTTGGGCCAGTTTTTGTCTCTCCGGCCCGGAGAGTTTTGCTAACCTCGCGTTTTCTGCAGAGGCAGACTGAGTAACTTCAGAAGgcgact            >  1:26873/1‑272 (MQ=255)                                                                                                                                                                                                                                                                     tttAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAAGAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACTTCAGAGAGATCCAGCAATGTCAGCACCTTACCGGCa                                                                                                          <  2:134562/181‑1 (MQ=255)                                                                                                                                                                                                                                                                               tCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCgaga                                                                                                                                                                                              >  2:605805/1‑87 (MQ=255)                                                                                                                                                                                                                                                                               tCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGgaga                                                                                                                                                                                    >  1:559838/1‑97 (MQ=255)                                                                                                                                                                                                                                                                               tCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACTTCAGAGAGATCCAGCAATGTCAGCAcc                                                                                                                   >  1:604673/1‑162 (MQ=255)                                                                                                                                                                                                                                                                               tCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACTTCAGAGAGATCCAGCAATGTCAGCACCTTACCGGCACTCTGTTGGGCCAGTTTTTGTCTCTCCGGCACGGAGAGTTTTGCTGAACTCGCGTTTTCTGAAGGGGCCGCTTTATGACCTTCAGAAGGCGCATCtttttcccc  >  2:230355/1‑271 (MQ=255)                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                   GCTGGCAGAGATTCTGGCTTAACGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCAGCGTGGCTGCACCATCAAGTTGGACTTCAGAGAGATCCAGCAATGTCAGCACCTTACCGGCACTCTGTTGGGCCAGTTTTTGTCTCTCCGGCACGGAGAGTTTTGCTGAACTCGCGTTTTCTGAAGAGGCCGCTTTAGTAACTTCAGAAGGCGCATCTTTTTTCAC  >  CP009273/2645021‑2645565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.