New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3581810	76 (1.890)	4 (0.110)	3/292	NT	5.7%	coding (731/1071 nt)	ugpC	glycerol‑3‑phosphate transporter subunit
	?	CP009273	= 3582559	60 (1.590)					coding (829/846 nt)	ugpE	glycerol‑3‑phosphate transporter subunit

TAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAG  >  CP009273/3582287‑3582830                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                tAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCTCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGTTTACTGCCTGTAATTTCAGTCCGGCCATCTTATTACTCACTATAGACca                                                                                                                                                                                                                                                                               <  1:582920‑M2/275‑3 (MQ=255)              ccATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCATGCCAGCGTATTTCTCCTTATCGACNTTTCCGCGCCCGa                                                                                                                                                                                                                                                                   >  2:546986/1‑274 (MQ=255)              ccATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCGGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAANGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGa                                                                                                                                                                                                                                                                   >  1:542638/1‑274 (MQ=255)                                               ccgTCACGCGCTGGTCGTTGATCCAGCTTTCGCCTTCTGTCACCCGCTCCAGCCCGTCAACCTTGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCgg                                                                                                                                                                                                                                 <  1:66036/273‑1 (MQ=255)                                                aGTAACGCTCTGGCCGCTGAGCCAGATTCCGCCTTCTGTCACCCCCTCCAGCCCCGCAACCTGGCGCATCAGCGTCGATTTCTCGCAGCCAGACGGCCCGACCATCACGAGAAATTCGCCATCCGCCACAGCAAGGGTCAGCGGTTTAATGAACTGGGTTTTGCCATCCCAGGTTTTGGTCACTGCCTGTAATTTCAGTCCTGCCATCCTATTTCTCACTAGCGCCCAGGCCGCGCACGAAGGCACGCTGCATCATTAAAACCATCACCACCgg                                                                                                                                                                                                                                 <  2:258225/274‑1 (MQ=255)                                                      gcgcTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTaaaa                                                                                                                                                                                                                                              >  1:261702/1‑255 (MQ=255)                                                      gcgcTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATa                                                                                                                                                                                                                          >  1:354419/1‑275 (MQ=255)                                                            gTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCa                                                                                                                                                                                                                                                              >  2:263800/1‑233 (MQ=255)                                                            gTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCa                                                                                                                                                                                                                                                              <  1:263803/233‑1 (MQ=255)                                                                      cAGATATCGCATTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGGCAGCGGTTTAATGACCTGGGATTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCAATATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACAAAAACAATCACCACCGAAAGGATAAGCGTTAACAAAATCg                                                                                                                                                                                                          >  1:740580/1‑275 (MQ=255)                                                                                 ttCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACt                                                                                                                                                                                               <  1:30669/275‑1 (MQ=255)                                                                                  tCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACc                                                                                                                                                                                                                                                                                >  2:674574‑M2/1‑192 (MQ=255)                                                                                   cTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCCCGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCAACACCACTGa                                                                                                                                                                                             >  1:179629/1‑275 (MQ=255)                                                                                             cTCCAGCCCGGCAACCATGCGCAGCAACGTCGATGTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCANGCCGCGCANGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAACCGTTAACAACATCGCCACCATCACTGAACTCCAtac                                                                                                                                                                                    >  1:480209/1‑272 (MQ=255)                                                                                                  gCCCGGCAACCATGCGCAGCAGCCTCGATGTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGNGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCgtgg                                                                                                                                                                               >  1:517981/1‑274 (MQ=255)                                                                                                        cAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTNATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTCAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTc                                                                                                                                                                        <  1:546997/275‑1 (MQ=255)                                                                                                        cAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTc                                                                                                                                                                        <  1:239882/275‑1 (MQ=255)                                                                                                          aCCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAANGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGc                                                                                                                                                                      <  1:548925/275‑1 (MQ=255)                                                                                                                      agcGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAACGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATACCGTGGTGCCTTCGCCGGTAGCGatca                                                                                                                                                          <  1:732677/275‑1 (MQ=255)                                                                                                                       gagagaaTTTACCGCAGTCAGACGGGCCAACCATCACGATTAATTAGCCATCCGCCACATCAAGTGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCATGCCATCGTATTTCTCACGATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGatca                                                                                                                                                          <  2:558072/268‑1 (MQ=255)                                                                                                                          tCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATcc                                                                                                                                                       >  1:5248/1‑274 (MQ=255)                                                                                                                                 cccGCAACCAGCCGGCCCCACCATCACGATAAATTCGCCATCCTCCACATCAATGTTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGAt                                                                                                                                                <  2:179627/274‑1 (MQ=255)                                                                                                                                            aCGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTANTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTCGCGCTCATCCCTCTGATCCCTGCCACgg                                                                                                                                     <  1:501840/274‑1 (MQ=255)                                                                                                                                                cgcggccATCACGATACATACGCCATCCGCCACATCAAGGGTCAACGGTTTAATTACCTGGGTTTTACCATCCCCGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTCTTTCTCTCTATCGCCCATGCCACTCACCAAGGCACGCTGCATCACTaaaaata                                                                                                                                                                                                                                           >  2:435235/6‑165 (MQ=255)                                                                                                                                                    aCCATCACGATAAATTCGCCATCCGCCACATAAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGATGGCACGCTGCATCACTAAAACAATcac                                                                                                                                                                                                                                       <  1:435242/168‑1 (MQ=255)                                                                                                                                                         cACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACcaggccgcg                                                                                                                                                                                                                                                                        <  2:419570‑M2/130‑10 (MQ=255)                                                                                                                                                             aTAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACg                                                                                                                                                                                                                                                                    <  1:419577/130‑1 (MQ=255)                                                                                                                                                              tAACTTAGCCAGCNCCCACATCAAGGGTCGGCTGTTTTATGAACTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTCATTTCAGTCCTGCCATCTTATTTCTCACGATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTACCAACATCGCCACCATCACTGAGTTTCATTCCGTGGTGCCTTCTCCTGTAGCGATCATCCCTTTGATCCCTGCCCCGGTGGTGCCGAGATCCACAt                                                                                                                   <  2:542627/274‑1 (MQ=255)                                                                                                                                                                  ttCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGt                                                                                                               >  1:447775/1‑274 (MQ=255)                                                                                                                                                                           tgcaacaTAAAGGGTCACCGGTTTAATGACCTGTGTTTTACCATCCCAGTTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATcaac                                                                                                     <  2:517972/271‑1 (MQ=255)                                                                                                                                                                              cacaTCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCNTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACAt                                                                                                                   <  1:576897/258‑1 (MQ=255)                                                                                                                                                                                 taacaggttaggtggTTTAATTNCGTTGGTTTTACCATCCCATTNTTTGGTAACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTAACTACCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACg                                                                                                 <  2:447768/260‑1 (MQ=255)                                                                                                                                                                                 aTCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAg                                                                                                                                                                                                                               >  2:498947/1‑147 (MQ=255)                                                                                                                                                                                     aGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGGATCAACAAAACAAGCACCACCGGAGGGAt                                                                                                                                                                                                                           <  1:498956/147‑1 (MQ=255)                                                                                                                                                                                           aGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACcaggccg                                                                                                                                                                                                                                                                          <  2:165936‑M2/94‑8 (MQ=255)                                                                                                                                                                                               gTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCa                                                                                                                                                                                                                                                                      <  1:165938/94‑1 (MQ=255)                                                                                                                                                                                                tttagggtccggtgTTTTACCATCCCCTCTTTTGGTTACTGCCTGTAATTTCCGTCCTGCCATCTTAGTTTGCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACCACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTc                                                                                <  2:5248/262‑1 (MQ=255)                                                                                                                                                                                                tttAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTg                                                                                                                                                                                              >  2:677938/1‑165 (MQ=255)                                                                                                                                                                                                    aTGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGtt                                                                                                                                                                                          <  1:677952/165‑1 (MQ=255)                                                                                                                                                                                                          tGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGt                                                                                                                                                                                           >  2:552555/1‑158 (MQ=255)                                                                                                                                                                                                              ttttACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCCCAGGAGGGATAAGCGTTTACAACATCGCCTCCATCACTGAGTTCCa                                                                                                                                                                                       <  1:552566/158‑1 (MQ=255)                                                                                                                                                                                                                      tCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAggg                                                                                                                                                                                                                             >  2:90929/1‑112 (MQ=255)                                                                                                                                                                                                                      tCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGGTCCTTCGCCTCTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGCGATCCACCACGGTAACAATCAACAACAGCCACAAAACCTGCATCCACCCGTAGACAAAgtgcttc                                                           >  2:247962/1‑268 (MQ=255)                                                                                                                                                                                                                       cccAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTACATTCCGTGGTNCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATaac                                                         >  1:662410/1‑275 (MQ=255)                                                                                                                                                                                                                        ccAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCACTTCCGTGGTGNCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATcac                                                         >  1:684872/1‑274 (MQ=255)                                                                                                                                                                                                                          aGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATaa                                                                                                                                                                                                                         <  1:90930/112‑1 (MQ=255)                                                                                                                                                                                                                                  gTTACTGCCTGTAATTTCAGTCCTTCCATCTTATTTCTCCCTATCGACAAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGACGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGcgccg                                              <  1:373757/275‑1 (MQ=255)                                                                                                                                                                                                                                     aCTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACg                                                                                                                                                                                                                                                            >  1:242257/1‑66 (MQ=255)                                                                                                                                                                                                                                      cTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACcaggccgcgtgaataacgaaggcacgcatttcgaactggacggcggtattgagctgccgctaaacggtggctaccgtcagtatgccgggcgtaaaatgactctcggcattcgcccggaacatattgcgctaagc                                                                                                                                           <  2:392440‑M2/178‑135 (MQ=255)                                                                                                                                                                                                                                      cTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACcaggccgcgtgaataacgaaggcacgcatttcgaactggacggcggtattgagctgccgctaaacggtgg                                                                                                                                                                                                           <  2:603631‑M2/114‑71 (MQ=255)                                                                                                                                                                                                                                      cTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATcacc                                                                                                                                                                                                                                      >  1:61978/1‑87 (MQ=255)                                                                                                                                                                                                                                         ccTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGc                                                                                                                                                                                                                                                        <  2:242254/66‑1 (MQ=255)                                                                                                                                                                                                                                          cTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACcaggccgcgtgaataacgaaggcacgcatttcgaactggacggcggtattgagctgccgctaaacggtggctaccgtcagtatgccgggcgtaaaatgactctcggcattcgcccggaacatattgcgctaagctcgc                                                                                                                                       >  1:392447‑M2/1‑40 (MQ=255)                                                                                                                                                                                                                                          cTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACcaggccgcgtgaataacgaaggcacgcatttcgaactggacggcggtattgagctgccgctaaacggtggctac                                                                                                                                                                                                       >  1:603644‑M2/1‑40 (MQ=255)                                                                                                                                                                                                                                          cTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCg                                                                                                                                                                                                                                  <  2:61977/87‑1 (MQ=255)                                                                                                                                                                                                                                           tGTAATTTCCGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGTAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTATCGATCATCCCTTTGATCCGTGCCACGGTGGTGCCGAGATCCACATCGTTAATAATCAACAACGGCCACAAATACTGATTCAAGCCGTAGATAAAGGTGAACAAAAACAACACCGCCAGATAAg                                     >  1:469269/1‑275 (MQ=255)                                                                                                                                                                                                                                            gTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATAATTATTCCAGCCGTAGATAAAGGTAANCACAAACAGTCCCACCAGAATaat                                    >  2:427105/1‑273 (MQ=255)                                                                                                                                                                                                                                                 ttCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACg                                                                                                                                                                                                                                                                    >  1:676178/1‑46 (MQ=255)                                                                                                                                                                                                                                                   cAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCtt                                                                                                                                                    >  1:553042/1‑156 (MQ=255)                                                                                                                                                                                                                                                     gTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAgg                                                                                                                                                                                                                                                                <  2:676164/46‑1 (MQ=255)                                                                                                                                                                                                                                                     gTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAg                                                                                                                                                                                                                               >  1:259836/1‑79 (MQ=255)                                                                                                                                                                                                                                                     gTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTc                                                                                                                                                                                    >  1:424176/1‑122 (MQ=255)                                                                                                                                                                                                                                                       ccTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGAt                                                                                                                                                <  2:553031/156‑1 (MQ=255)                                                                                                                                                                                                                                                         tGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGAt                                                                                                                                                                                                                           <  2:259833/79‑1 (MQ=255)                                                                                                                                                                                                                                                         tGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCgtg                                                                                                                                                                                <  2:424169/122‑1 (MQ=255)                                                                                                                                                                                                                                                           ccATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACg                                                                                                                                                                                                                                                            >  2:88884/1‑44 (MQ=255)                                                                                                                                                                                                                                                               cTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGc                                                                                                                                                                                                                                                        <  1:88885/44‑1 (MQ=255)                                                                                                                                                                                                                                                                 tagttCACACCATCGACCAGGCCGCGCACGAAGGCACGCGGCATCACTAAAACAATCGCCACCGGGGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTGCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGAt               <  2:684858/272‑1 (MQ=255)                                                                                                                                                                                                                                                                   tttCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGa                                                                                                                                                                                                                                >  1:425325/1‑64 (MQ=255)                                                                                                                                                                                                                                                                       tcACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGa                                                                                                                                                                                                                            <  2:425318/64‑1 (MQ=255)                                                                                                                                                                                                                                                                         aCTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAg                                                                                                                                                                >  2:397652/1‑122 (MQ=255)                                                                                                                                                                                                                                                                         aCTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGCGATCCACATCGGTAATAATcaacaa                                                                                                   >  2:134072/1‑183 (MQ=255)                                                                                                                                                                                                                                                                           tATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCAt                                                                                                                                                                                                   >  2:498928/1‑85 (MQ=255)                                                                                                                                                                                                                                                                             tCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGat                                                                                                                                                            <  1:397659/122‑1 (MQ=255)                                                                                                                                                                                                                                                                             tCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCtt                                                                                                                                                    >  1:126680/1‑130 (MQ=255)                                                                                                                                                                                                                                                                             tCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGc                                                                                               <  1:134073/183‑1 (MQ=255)                                                                                                                                                                                                                                                                              cGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAaagaag  <  1:247965/275‑1 (MQ=255)                                                                                                                                                                                                                                                                              cGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTATGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAaagaag  <  1:659496/275‑1 (MQ=255)                                                                                                                                                                                                                                                                               gACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGAATTAACAAAATCGCCACCATCACt                                                                                                                                                                                               <  1:498937/85‑1 (MQ=255)                                                                                                                                                                                                                                                                                aCCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCAt                                                                                                                                                                                                   >  1:718457/1‑80 (MQ=255)                                                                                                                                                                                                                                                                                 ccAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGAt                                                                                                                                                <  2:126679/130‑1 (MQ=255)                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                TAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAG  >  CP009273/3582287‑3582830

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.