New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 112279	47 (1.170)	3 (0.080)	3/304	NT	6.4%	coding (1308/1386 nt)	hofB	T2SE secretion family protein; P‑loop ATPase superfamily protein
	?	CP009273	= 112436	42 (1.070)					coding (1151/1386 nt)	hofB	T2SE secretion family protein; P‑loop ATPase superfamily protein

GCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTACCAGCGTAAGCGCCGATGATAGCATCCAGCGGGCGACCCCCATTTGCTGTAAACGTACCAGCGTTTCGCAGGTGGAATTAGTGTGTAGGGTAGACAACACCAGGTGACCAGTTTGCGCCGCTTTAATAGCGATCTCTGCTGT  >  CP009273/112190‑112695                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                    ggctgagtttgtaaCTCGCCGTGCGGCATCCCCAGTCCGCGGATTAACTCTTCAAAGGTGGTTAACCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTGTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGa                                                                                                                                                                                                                                         <  2:211892/262‑1 (MQ=255)           cTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAACACAGTGGTAGCAATGTACACAAACGGGTGCCTGCCAGTGGGGCAGAGGCGATGGCCATACa                                                                                                                                                                                                                               >  2:693621/1‑275 (MQ=255)                 cGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTTCTCTACGGCCAGGCAGCCGATTTCAAAAAGCGTACGCATACCCCCCTGTCGCGCGTGCGTTTCCAGCGACTCAACGACGGTACTAGCGGAAATACGCTGACGATTAACGGGCGTTATGCGATGAACTTGAAAGAAGACCGAACGACCCTAAAACACATAGTAGCAATGTACAACACAGGGTGCCTCGCAGTCGGNCAacggcgcagnnnngcct                                                                                                                                                                                                                               >  2:26283/1‑258 (MQ=255)                                                     cAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTCTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGCCCGTATTCGCGGCCATAAGCTGACGAATGCCCGGCGTTATGGGCCGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTACCCATGTACCCAACCGGGTCCCTGCCACCGGCACACCGGCCACGGCCACACCTCGCCTGGCACGTGGACGGGCGCCCCTTTCTCCCCGcccccc                                                                                                                                                                                     >  2:632620/1‑270 (MQ=255)                                                         tttgctgacgCCTTGCTCTCCGGCCAGCCATCCGTATACAAAAACCTTACGCATACCCGCCTGTCGTGCGTGCGTTGCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAGACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAAtg                                                                                                                                                                                   <  2:333022/264‑1 (MQ=255)                                                             gtTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGCCAATGTGGGCa                                                                                                                                                                             >  1:46808/1‑275 (MQ=255)                                                                  gCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATgg                                                                                                                                                                                                                                      >  1:45463/1‑213 (MQ=255)                                                                      tGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCAt                                                                                                                                                                                                                                  <  2:45462/213‑1 (MQ=255)                                                                             cGGCGAGGCAGCCGTTTTAAAAAAGCGTACGCATACCCGCCTGGCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGANCTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTAcc                                                                                                                                                                <  1:632634/272‑1 (MQ=255)                                                                                   ggCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTCGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCCATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATGGTCTGGAATGTgg                                                                                                                                                                                                                >  1:257650/1‑218 (MQ=255)                                                                                                    aGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGACCTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACcggctgcctggccgtagagcaaggcttaaccacctntgaagagttaatccgcgtactggggatgccgcatggcgagtaagcaactc                                                                                                                                                                               <  1:559750‑M2/234‑87 (MQ=255)                                                                                                     gCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTCACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACcggctgcctggccgtagagcaaggcttaaccaccttngaagagttaatccgcgtactggggatgccgcatggcgagtaagcaactctggcgctggcatggcataaccggcgacggcaatgcgcaagat                                                                                                                                     <  1:539688‑M2/275‑129 (MQ=255)                                                                                                          cGCTTACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAACTAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACcggctgcctggccgtagagcaaggcttaaccacctttgaagagttaatccgcgtactggggatgccgcatggcgagtaagcaactctggcgctggcatggcataaccggcgacggcaatgcgcaagatgggat                                                                                                                                >  1:396519‑M2/1‑142 (MQ=255)                                                                                                                cccGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGa                                                                                                                                                                                                               >  2:283913/1‑190 (MQ=255)                                                                                                                    ccTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATggg                                                                                                                                                                                                           <  1:283918/190‑1 (MQ=255)                                                                                                                               tgcgtTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTAACAGCGTAAGCGCCGATGATAGCATCCAGCGGGCGAc                                                                                                           >  1:459296/1‑275 (MQ=255)                                                                                                                                      gcAGCGAGTCACTGTCGGGATTAGAGGAAATAAGCTGAAGAATGTCCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTACCAGCGTAAGCGCCGATGATAGCATCCAGCGGGCGACCCCCAtt                                                                                                    <  2:46807/274‑1 (MQ=255)                                                                                                                                            aTTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTACCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTACCAGCGTAAGCGCCGATGATAGCATCAAGCGGGCGAcccc                                                                                                        >  1:380173/1‑265 (MQ=255)                                                                                                                                                       gTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCa                                                                                                                                                                                                                                                        >  1:511502/1‑110 (MQ=255)                                                                                                                                                           tAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTgg                                                                                                                                                                                                                                                    <  2:511493/110‑1 (MQ=255)                                                                                                                                                                  aaTAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCGGGGCTATTACCAGCGTAAGCGCCGATGATCGCATCCAGCGGGCAACCCCCAGTAGCTGTAAGCTTCCCAGCGTTTCGCatt                                                                        >  2:721369/1‑273 (MQ=255)                                                                                                                                                                   aTAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTTCACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTACCAGCGTAAGCGCCGATGATAGCATCCAGCGGGCGACCCCCATTTGCTGTAAACGTACCAGCGTTTCGCAgg                                                                        <  1:693635/274‑1 (MQ=255)                                                                                                                                                                      aGCTGACGACTGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATCTGGGCAAAGTTTGCGTACCNGACGCTGGGCTATTACCAGCGTAAGAGCCGATGATAGCATCCAGCGGGCGACCCCCATTTGCTGTAAACGTACCAGCGTTTCGCAGGGGGa                                                                    >  1:573092/1‑275 (MQ=255)                                                                                                                                                                          gACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGCGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCa                                                                                                                                                                                                                                   >  2:417461/1‑112 (MQ=255)                                                                                                                                                                           aCGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTACCAGCGTAAGCGCCGATGATAGCATCCAGCGGGCGACCCCCATTTg                                                                                                  >  1:254297/1‑240 (MQ=255)                                                                                                                                                                              aaTGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGCGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACa                                                                                                                                                                                                                               <  1:417468/112‑1 (MQ=255)                                                                                                                                                                               aTGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTACCAGCGTAAGCGCCGATGATAGCATCCAGCGGGCGACCCCCATTTGCTGt                                                                                              <  2:254294/240‑1 (MQ=255)                                                                                                                                                                                             gggCAGAACTTCAAATAAGGCCGTACGAACATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTACCAGCGTAAGCGCCGATGATAGCATCCAGCGGGCGACCCCCATTTGCTGTAAACGTACCAGCGTTTCGCAGGTGGAATTAGTGTGTAAGGTAGacaac                                              <  1:721383/274‑1 (MQ=255)                                                                                                                                                                                                 aGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTACCAGCGTAAGCGCCGATGATAGCATCCAGCGGGCGAccc                                                                                                         >  1:551221/1‑211 (MQ=255)                                                                                                                                                                                                   aaCTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGt                                                                                                                                                                         >  2:378242/1‑145 (MQ=255)                                                                                                                                                                                                   aaCTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGa                                                                                                                                                             >  1:289454/1‑157 (MQ=255)                                                                                                                                                                                                     cTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGTTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTACCAGCGTAAGCGCCGATGATAGCATCCAGCGGGCGACCCCCAt                                                                                                     <  2:551210/211‑1 (MQ=255)                                                                                                                                                                                                       tCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGc                                                                                                                                                                     <  1:378249/145‑1 (MQ=255)                                                                                                                                                                                                       tCAAATAAGGCCGGACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCt                                                                                                                                                         <  2:289449/157‑1 (MQ=255)                                                                                                                                                                                                        ccaaTAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAAACGGGGGCCTGCCAGTGGGGCAGCGGCGATGGGCATACGTTGTCAGGAATGTGGATGGGCCCCCCTTGCCGCGTGCGCCAGTGTGGGCCAGGTTTTCGTACCAGACCCTCGGCTATTACCAGCGTAAGCGCTCGTGATAGGTTCCAGCGGGCGACCCCTATATGCAGTAAACGCACCCGAATTCGGGAGGTGGAATTATGGTGTTGGGTAGACAACAACAgattagca                                  >  2:326007/3‑268 (MQ=255)                                                                                                                                                                                                                    tACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTACCAGCGTAAGCGCCGATGATAGCAGCCAGCGGGCGACCCCCATTTGCTGTAAACGTACCAGCGTTTCGCAGGTGGAATTAGTGTGTAGGGTAGAAAACACCAGGTGACCAGTTTGcgccg                        >  1:381978/1‑273 (MQ=255)                                                                                                                                                                                                                         ccATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGAc                                                                                                                                                                                       >  1:358543/1‑109 (MQ=255)                                                                                                                                                                                                                             aaaaaCCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAAtg                                                                                                                                                                                   <  2:358537/109‑1 (MQ=255)                                                                                                                                                                                                                              aaaaCCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTCTGCGTACCa                                                                                                                                                               >  2:721818/1‑128 (MQ=255)                                                                                                                                                                                                                                  ccGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTCTGCGTACCAGACg                                                                                                                                                           <  1:721832/128‑1 (MQ=255)                                                                                                                                                                                                                                    gTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCGCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTACCAGCGTAAGCGCCGATGATAGCATCAAGCGGGCGACCCCCATTTGCTGTAAACGTACCAGCGTTTCGCAGGTGGAATTAATGTGGAGGGTAGACAACACAAGGTGAACAGTTTGCGCCGCTTTAATAGCCATCTttg      >  2:623390/1‑275 (MQ=255)                                                                                                                                                                                                                                     tGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTACCAGCg                                                                                                                                          >  1:169103/1‑142 (MQ=255)                                                                                                                                                                                                                                         ccgggtGTCCACAACCTGGTGCCGGCCAGTGGGGCAGCGGCGAGGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTACCAGCGTAAGCGCCGATGATAGCATCCAGCGGGCGACCCCCATTTGCTGTAAACGTACCAGCGTTTCGCAGGTGGAATTAGTGTGTAGGGTAGACAACACCAGGTGACCAGTTTGCGCCGCTTTAATAGCGATCTCTGCTGt  <  1:346615/269‑1 (MQ=255)                                                                                                                                                                                                                                         aGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTACCAGCGTAAg                                                                                                                                      <  2:169101/142‑1 (MQ=255)                                                                                                                                                                                                                                          gCAATGTACACAACCGGGTGCCTCCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGCATTTGGACGCGCTACCCTTCCTGCCCGCGACAATGTGGGCGAAGCTCGCGTTCCCGACGCTCGGCTATAACCAGATTGAACGCCGCTGCAAGCAGCCTGCGCGCGACCTCCATATGCTGTATACGTAACAACGTTTCGCCGGTAGAATTACTGAGGTGGGGAGACACCACCAGGGCCCCAGTTTGTGCCTCTTTCATAGCGTTCCctcctgg  >  2:327094/1‑272 (MQ=255)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                    GCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGCGTACCAGACGCTGGGCTATTACCAGCGTAAGCGCCGATGATAGCATCCAGCGGGCGACCCCCATTTGCTGTAAACGTACCAGCGTTTCGCAGGTGGAATTAGTGTGTAGGGTAGACAACACCAGGTGACCAGTTTGCGCCGCTTTAATAGCGATCTCTGCTGT  >  CP009273/112190‑112695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.