New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 403741	56 (1.400)	4 (0.110)	4/294	NT	7.1%	coding (109/285 nt)	yaiE	UPF0345 family protein
	?	CP009273	= 403819	51 (1.340)					coding (187/285 nt)	yaiE	UPF0345 family protein

AATTACTGGTGTAATTTTGCGTGACAGCCAGCGCCTCTGGCCCCTATAGTGAAGTAGATGTTCAACTACCAAACAGGGCCAGTTTATGCTTCAAAGTAATGAGTACTTTTCCGGCAAAGTGAAATCAATCGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCGCCTTCCCCTTGAACGGGAGGGCATTTTTCTGAAATATCCTTTCTTTAGCCCATAATAATATTTCCTTTGCTGCGATTTTTTCAATTTCCGATATATTCATAATTTATCAAGGTTGATATAAATATCAGTGAAGA  >  CP009273/403548‑404058                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                aaTTACTGTGGTAATTTTGCGTGACAGCCAGCGCCTCTGGCCCCTATAGTGAAGTAGATGTTCAACTACCAAACAGGGCCAGTTTATGCTTCAAAGTAATGAGTACTTTTCCGGCAAAGTGAAATCAATCGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCag                                                                                                                                                                                                                                               >  1:34539‑M2/1‑272 (MQ=255)                                 taatctGGCACCTATGGGGAACTAGATGGTCAACTACCAAATTGGGCCTGCTTATACTTCAAAGTTATGAGTCCGTTTCCGCCAACGTGAAATCACACCTCTTTTGCAGCACGAGTACTGGTGGCTCCAGCGTGGGGGTTATGGTTAAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGAAATCAGTGGAGCGCTGAATGTGATACGGACTGACGCGACCGACGGGCAGGGGGATGAAGCCCGTTTGGGGGTTGATGtggac                                                                                                                                                                                                              >  2:192836/4‑271 (MQ=255)                                     gtggacacgttaGTGAAGTAGAGGTTCACCTACCAAACAGGGCCAGTTTATGCTTCAAAGTAATGAGTACTTTTCCGGCAAAGTGAAATCAATCGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGt                                                                                                                                                                                                           <  2:81880/264‑1 (MQ=255)                                        gCCCCTATAGTGAAGTAGATGTTCAACTACCAAACAGGGCCAGTTTATGNTTCAAAGTAATGAGTACTTTTCCGGCAAAGTGAAATCAATCGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGc                                                                                                                                                                                                                                                 <  1:554106/233‑1 (MQ=255)                                             tataGTGAAGTAGATGTTCAACTACCAAACAGGGTCAGTTTATGCTTCAAAGTAATGAGTACTTTTCCGGCAAAGTGAAATCAATCGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAANCAGTGGCGNGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGGGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAg                                                                                                                                                                                                  >  1:489374/1‑275 (MQ=255)                                                      gTAGATGTTCAACTACCAAACAGGGCCAGTTTATGCTTCAAAGTAATGAGTACTTTTCCGGCAAAGTGAAATCAATCGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGc                                                                                                                                                                                                                                                 <  2:739722/219‑1 (MQ=255)                                                       tAGATGTTCAACTACCAAACAGGGCCAGGTTATGCTTCAAAGTAATGAGTACTTTTCCGGCAAAGTGAAATCAATCGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGTTGACGGTAATCAGTGGCGCNCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTAAGTTTCATATGc                                                                                                                                                                                        >  1:572457/1‑275 (MQ=255)                                                                               ccAGTTTATGCTTCAAAGTAATGAGTACTTTTCCGGCAAAGTGAAATCAATAGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCCGCACCGCTGAGCCGGAAGAGATGCCGGTAATCCGTGGCGCGCTGCATGTGTTACTGCCTGACGCGAACGCCTGGCAGGTGTATGAAGCCg                                                                                                                                                                                                                                  >  2:39378/1‑209 (MQ=255)                                                                                   tttATGCTTCAAATTAATGAGTACTTTTCCGGCAAAGTGAAATCAAGCGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTGATGGTTGAAGGCGAATACACCTTCAGCACCGCGGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACGGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCtgtg                                                                                                                                                            <  1:98574/275‑1 (MQ=255)                                                                                   ttgaggCTTCAAAGTAATGAGTACGTTTCCGGCAAAGTGAAATCAATCGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTc                                                                                                                                                                                                                              <  1:39379/204‑1 (MQ=255)                                                                                              aaGTAATGAGTACTTTTCCGGCAAAGTGAAATTAATCGGCTTTTCCCGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTg                                                                                                                                                  <  1:292274/274‑1 (MQ=255)                                                                                                   aTGAGTACTTTTCCGGCAAAGTGAAATCAATCGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCgg                                                                                                                                                                                                                                 >  1:155359/1‑190 (MQ=255)                                                                                                          cTTTTCCGGCAAAGTGAAATCAATCGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGANGGTAATCAGTGACGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCGCCt                                                                                                                                     <  1:665775/275‑1 (MQ=255)                                                                                                                 ggCAAAGTGAAATCAATCGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCag                                                                                                                                                                                                                                               >  2:591732‑M2/1‑160 (MQ=255)                                                                                                                                      ttttCCAGCAGCAGCACTGGTCGAGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCNGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGGATGAAGCCGGGTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCTAGTTGCCGAACCCACCTCTTCGCTGTGCCGCTATTTGTAATTCCTCGCCt                                                                                                                                     <  1:524169/247‑1 (MQ=255)                                                                                                                                        ttCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGCGCCGGAAGAGATGACGGTAATAAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTGCGGTGTTTAATTTTCCCGGGCACAGTGATTTTCATCTGCAAGTTGCGGAACCCCACTCTTATCTGGGCCGATTTCTGTAATTCCTCGACTTCCCCTTGAACTGGGGGGctgtttgcggat                                                                                                       >  2:242730/1‑264 (MQ=255)                                                                                                                                                         ggcggggcAGCGTGGGGTGTATGGGTGAAGGAGAAAACACCTTCAGAACCGCTGGGCCGGAAGGGATGACGGTAATCATGGGCGGGCTGAATGTGTTACTGCCGGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCGCCTTCCCCTTGAACGGGAGGGCATTTTTCTGAAATATCCTTTCTTTAGcc                                                                                      <  2:159713/268‑1 (MQ=255)                                                                                                                                                                   cGTGGGTGTTATGGTTGAAGGCGAATACGCCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCg                                                                                                                                                                               >  1:507468/1‑176 (MQ=255)                                                                                                                                                                       ggTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAAcc                                                                                                                                                                           <  2:507459/176‑1 (MQ=255)                                                                                                                                                                        gtgtTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGgtgt                                                                                                                                                                                                                         >  2:270428/1‑129 (MQ=255)                                                                                                                                                                            tATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTaa                                                                                                                                                                                                                     <  1:270432/129‑1 (MQ=255)                                                                                                                                                                                  tGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGNCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCGCCTTCCCCTTGAACGGGAGGGCATTTTTCTGAAATATCctttc                                                                                             >  1:663932/1‑243 (MQ=255)                                                                                                                                                                                  tGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCGCCTTCCCCTTGAACGGGAGGGAATTTTTCTGAAATATCctt                                                                                               >  1:171108/1‑241 (MQ=255)                                                                                                                                                                                   gAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCg                                                                                                                                                                                                                                  >  2:730684/1‑109 (MQ=255)                                                                                                                                                                                   gAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATc                                                                                                                                                                                           >  2:417065/1‑148 (MQ=255)                                                                                                                                                                                   gAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCg                                                                                                                                                                               >  2:104890/1‑160 (MQ=255)                                                                                                                                                                                   gAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCAGCTGCAAGTTGCCGAAccc                                                                                                                                                                          >  1:651950/1‑165 (MQ=255)                                                                                                                                                                                       gCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTc                                                                                                                                                                                                                              <  1:36204/109‑1 (MQ=255)                                                                                                                                                                                       gCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTc                                                                                                                                                                                                                              <  1:730698/109‑1 (MQ=255)                                                                                                                                                                                       gCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCa                                                                                                                                                                                       <  1:417072/148‑1 (MQ=255)                                                                                                                                                                                       gCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAAcc                                                                                                                                                                           <  1:104891/160‑1 (MQ=255)                                                                                                                                                                                       gCGAATACACCGTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACct                                                                                                                                                                      <  2:651936/165‑1 (MQ=255)                                                                                                                                                                                                   tCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCGCCTTCCCCTTGAACGGGAGGGCATTTTTCTGAAATATCCTTTCTTTAGCCCATAATAATATTTCCTTTGCTGCGATTTTTTCAATTTCCGa                                             <  1:192838/274‑1 (MQ=255)                                                                                                                                                                                                           gCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCaggtgt                                                                                                                                                                                                                                           <  2:82802‑M2/76‑7 (MQ=255)                                                                                                                                                                                                           gCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACctc                                                                                                                                                                     >  1:668140/1‑146 (MQ=255)                                                                                                                                                                                                           gCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCAGCTATCTGTAATTCCTCGCCTTCCCCTGGAACGGGAGGGCATTTTTCTGAAATATCCTTTCTTTAGCCCATAATACGATTTCCTTTGCTGGTATTTTTTCATTNTTTGGTATATTCAt                                    >  2:533070/1‑275 (MQ=255)                                                                                                                                                                                                           gCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGGGAGTTTCATCTGCAAGTTGCCg                                                                                                                                                                               >  2:389926/1‑136 (MQ=255)                                                                                                                                                                                                               aGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCaggtgtattcgccttcaaccataacacccacgctggcgcgaccagtgctgctgctggaaaagccgattgatttcactttgccggaaaagtactcatta                                                                                                                                               <  2:386541‑M2/164‑99 (MQ=255)                                                                                                                                                                                                               aGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCag                                                                                                                                                                                                                                               >  1:725383‑M2/1‑66 (MQ=255)                                                                                                                                                                                                               aGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGa                                                                                                                                                                                                                                       <  1:82803/76‑1 (MQ=255)                                                                                                                                                                                                               aGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAAcc                                                                                                                                                                           <  1:389933/136‑1 (MQ=255)                                                                                                                                                                                                               aGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTAt                                                                                                                                                                 <  2:668126/146‑1 (MQ=255)                                                                                                                                                                                                                 ccGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCaggtgtattcgccttcaaccataacacccatgctgg                                                                                                                                                                                                             <  2:345818‑M2/100‑37 (MQ=255)                                                                                                                                                                                                                   ggAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCaggtgtattcgccttcaaccataacacccacgctggcgcgaccagtgctgctgctggaaaagccgattgatttcactttgccggaaaagtactcattacttt                                                                                                                                           >  1:386548‑M2/1‑62 (MQ=255)                                                                                                                                                                                                                     aaGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCaggtgtattcgccttcaaccataacacccatgctggcgcg                                                                                                                                                                                                         >  1:345824‑M2/1‑60 (MQ=255)                                                                                                                                                                                                                          aTGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGCGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCGCCTTCCCCTTGAACGGGAGGGAATTTTTCTGACATATCCTTTCTTTAGCCCATAATAATATTTCCTTTGCTGCGATTTTTTCAATTTCCGATTTATTTATAATCTAACattgggt                     >  2:91577/1‑269 (MQ=255)                                                                                                                                                                                                                              cGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGc                                                                                                                                                           >  2:312581/1‑137 (MQ=255)                                                                                                                                                                                                                                  aaTCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCt                                                                                                                                                       <  1:312586/137‑1 (MQ=255)                                                                                                                                                                                                                                        tGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTc                                                                                                                                            >  2:404802/1‑142 (MQ=255)                                                                                                                                                                                                                                           cgcgcTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCgg                                                                                                                                                                                                                                 >  1:372056/1‑54 (MQ=255)                                                                                                                                                                                                                                           cgcgcTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCg                                                                                                                                                                                                                                  >  1:155009/1‑53 (MQ=255)                                                                                                                                                                                                                                            gctcTGAATGTTTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCGCCTTCCCCTTGAACGGGAGGGCATTTTTCTGAAATATCCTTTCTTTAGCCCATAATAATATTTCCTTTGCTGCGATTTTTTCAATTTCCGATATATTCATAATTTATCAAGGTTGATATAAATATCAGTGAAg   <  1:170116/272‑1 (MQ=255)                                                                                                                                                                                                                                            gcgcTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAg                                                                                                                                                                                                      <  1:227052/80‑1 (MQ=255)                                                                                                                                                                                                                                            gcgcTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCg                                                                                                                                        <  1:404809/142‑1 (MQ=255)                                                                                                                                                                                                                                            gcgcTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCGCCTTCCCCTTGAACGGGAGGGCATTTTTCTGAAATATCCTTTCTTTAg                                                                                        <  1:642288/190‑1 (MQ=255)                                                                                                                                                                                                                                             cgcTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCGCCTTCCCCTTGAACGGGAGGGCATTTTTCTGAAATATCCTTTCTTTAGCCCATAATAATATTTCCTTTGCTGCGATTTTTTCAATTTCCGATATATTCATAATTTATCAAGGTTGATATAAATATCAGTGAAGa  >  2:4088/1‑275 (MQ=255)                                                                                                                                                                                                                                               cTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTc                                                                                                                                                                                                                              <  2:155008/53‑1 (MQ=255)                                                                                                                                                                                                                                               cTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCg                                                                                                                                                                                                                             <  2:372049/54‑1 (MQ=255)                                                                                                                                                                                                                                                            tGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCGCCTTCCCCTTGAACGGGAGGGCATTTTTCTGAAat                                                                                                     >  1:269736/1‑161 (MQ=255)                                                                                                                                                                                                                                                             gCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCGCCTTCCCCTTGAACGGGAGGGCATTTTTCTGAAATATCCTTTCTTTAGACCATAATAATATTTCCTTTGCTGCGATTTTTTCAATTTCCGATATATTCATAATTTATCAAGGTTGATATaa               >  2:311635/1‑246 (MQ=255)                                                                                                                                                                                                                                                                tGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCGCCTTCCCCTTGAACGGGAGGGCATTTTTCTGAAATATcc                                                                                                 <  2:269732/161‑1 (MQ=255)                                                                                                                                                                                                                                                                 gACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCGCCTTCCCCTTGAACGGGAGGGCATTTTTCTGAAATATCCTTTCTTTAGACCATAATAATATTTCCTTTGCTGCGATTTTTTCAATTTCCGATATATTCATAATTTATCAAGGTTGATATAAatat           <  1:311640/246‑1 (MQ=255)                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                AATTACTGGTGTAATTTTGCGTGACAGCCAGCGCCTCTGGCCCCTATAGTGAAGTAGATGTTCAACTACCAAACAGGGCCAGTTTATGCTTCAAAGTAATGAGTACTTTTCCGGCAAAGTGAAATCAATCGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAATTCCTCGCCTTCCCCTTGAACGGGAGGGCATTTTTCTGAAATATCCTTTCTTTAGCCCATAATAATATTTCCTTTGCTGCGATTTTTTCAATTTCCGATATATTCATAATTTATCAAGGTTGATATAAATATCAGTGAAGA  >  CP009273/403548‑404058

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.