| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 203,857 | G→T | 7.6% | E749* (GAG→TAG) | dnaE → | DNA polymerase III alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 203,857 | 0 | G | T | 7.6% | 174.8 / 2.4 | 53 | E749* (GAG→TAG) | dnaE | DNA polymerase III alpha subunit |
| Reads supporting (aligned to +/- strand): ref base G (25/23); new base T (2/2); total (28/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.71e-01 | |||||||||||
CGGACGTACAGTGGCAGCATGAAAGCCTGAAACCGGTACTGGAGCCAACCTACGGCATTATCCTGTATCAGGAACAGGTCATGCAGATTGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTATCCTGCGGAGTTTATGGCGGCGGTAATGACCGCCGATATGGACAACACCGAGAAGGTGGTGGGTCTGGTGGATGAGTGCTGGCGGATGGGGCTGAAAATCCTGCCACCAGATATAAACTCCGGTCTTTACCATTTCCACGTCAACGACGACGGCGAAATCGTGTATGGTATTGGCG > CP009273/203603‑204121 | cGGACGTACAGTGGCAGCATGAAAGCCTGAAACCGGTACTGGAGCCAACCTACGGCATTATCCTGTATCAGGAACAGGTCATGCAGATTGCGCAGGTGCTTGCTGGTTATACCCTCGGTGGCGCGGATCTGCTGCGGCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGGGCAGAAAAGAAAGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACAGGGTGGAGAAATTCGCGGGTTACgg > 2:227065/1‑274 (MQ=255) tGAAACCGGTACTGGAGCCAACCTACGGCATTATCCTGTATCAGGAACAGGTCATGCAGATTGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTAt > 1:428073/1‑275 (MQ=255) ccGGTACTGGAGCCAACCTACGGCATTAACATGTATCAGGAACAGGTCATGCAGATTGCGCAGGTGCTTTCTGGTTATACCCGCGGTGGCGCGGATATGCTGCGTCGTGCGAGGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCtt < 1:227067/274‑1 (MQ=255) aCTGGAGCCAACCTACGGCATTATCCTGTATCAGGAACAGGTCATGCAGATTGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGANAAAGCCGGAAGCGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGgtgt < 1:673469/275‑1 (MQ=255) aaCCTACGGCATTATCCTGTATCAGGAACAGGTCATGCAGATTGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCTACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCg > 1:342598/1‑241 (MQ=255) tATCCTGTATCAGGAACAGGTCATGCAGATTGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCg > 1:317968/1‑238 (MQ=255) tatctcgcgggcccAGGTCATGCAGATTGCGCCGGTGCTTTATGGTGATACCCTCGGGTGCGCGGATATGCTGGTTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGaaa < 2:174257/261‑1 (MQ=255) cTGTATCAGGAACAGGTCATGCAGATTGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCt < 2:317962/238‑1 (MQ=255) tATCAGGAACAGGTCATGCAGATTGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAACTTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCa > 1:351527/1‑275 (MQ=255) ggAACAGGTCATGCAGATTGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGAATTTAAAAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCt > 1:174259/1‑261 (MQ=255) ggAACAGGCCATGCAGATTGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGATGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTATc > 1:646056/1‑275 (MQ=255) tGCAGATTGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACaaa > 1:647783/1‑203 (MQ=255) gATTGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGc < 2:647769/203‑1 (MQ=255) ttGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTATCCTGCGGAGTTGATggc > 1:348302/1‑274 (MQ=255) ttGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAAAGTTATGGCTGAAAGCGCACTAACCTGCGGAGGTTATggc > 1:117656/1‑274 (MQ=255) tGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGATGCGTCGGGCGATGGGTAAGAAAAAGCAGGAAGAGATGGCTAAGCAACGTTCTGTATTTGATGAAGGTGCAGAAAAGAACGGACTCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCAGGTTCCGGAATTAAAAAATCGAACGCTGCGGACTATGCTTTGGGGTGATATCAAACGTTATGGCTGAAAGAGAACTAGCCTGGGGAGTGTAttgaag > 2:695720/1‑270 (MQ=255) ttCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGgag > 2:256895/1‑157 (MQ=255) ggTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAAt < 1:256898/157‑1 (MQ=255) gccgcGGTGGCGGCGATATGAGTGGTCGGGCGGTGGGTAAGAAAAAGCCGGTAGAGATGGCTAAGGAACGTTATGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTAGCCTGCGGAGTTTATGGCGGCGGTAATGACCGCCGATATGGa < 2:646042/270‑1 (MQ=255) tcgtGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACaaa > 1:260100/1‑148 (MQ=255) tcgtGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCg > 2:445338/1‑160 (MQ=255) tGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCt > 2:204918/1‑127 (MQ=255) gCGATGGGTAATAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTAGGTTCTGACTGTGGAGAAAAGAACGGAAGCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGc < 2:260097/148‑1 (MQ=255) gCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCt < 1:445345/160‑1 (MQ=255) gCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACAGAATAAACGCTGAACTGGCGATGAAAATCTTCGACGTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTATCCTGCGGAGTTTATGGCGGCGGTAATGACCGCCGATATGGac < 1:467071/246‑1 (MQ=255) ggggggAAAAAAAAACCGGGAAAAGTTGGTTAAGAATCGTTCTGGATTTGCGGAAGGTGCGGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATGTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTAGCCTGCGGAGTTTATGGCGGCGGTAATGACCGCCGATATGGACAACACCGAGAAGGTGGTGGGTCTGGTGGAt < 2:351521/271‑1 (MQ=255) aTGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGtt < 1:204920/127‑1 (MQ=255) aaGAAAAAGCCGGAAGAGATGACTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGNAAGCGCACTATCCTGCGGAGTTTATGGCGGCGGTAATGACCGCCGATATGGACAACACCGAGAAGGTAGTGGGTCTGGTGGATGAGTGCTg > 1:507464/1‑275 (MQ=255) aGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGa > 2:318335/1‑119 (MQ=255) aGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATgg > 1:732908/1‑173 (MQ=255) gCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTATCCTGCGGAGTTTATGGCGGCGGTAATGACCGCCGat > 1:618729/1‑223 (MQ=255) gCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTATCCTGCGGAGTTTATGGCGGCGGTAATGACCGCCGat < 2:618716/223‑1 (MQ=255) ggAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTa < 1:318341/119‑1 (MQ=255) ggAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGa < 2:732894/173‑1 (MQ=255) tGCTGAAGGTGCAGAAAAGTACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTATCCTGCGGAGTTTATGGCGGCGGTAATGACCGCCGATATGGACAACACCGAGAAGGTGGTGGGTCTGGTGGATGAGTGCTGGCGGATGGGGCTGAAAATCCTGCCACCAGATATAAACTcc > 1:587397/1‑274 (MQ=255) gCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGTAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTAt > 2:615396/1‑111 (MQ=255) gCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCgg > 1:383400/1‑106 (MQ=255) gAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAAt > 1:727735/1‑91 (MQ=255) aaGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGTAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCtt < 1:615409/111‑1 (MQ=255) aaGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTa < 2:383393/106‑1 (MQ=255) aGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGTAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTATCCTGCGGAGTTTATGGCGGCGGTAATGACCGCCGATATGGACAACACCGAGAAGGTGGTGGGTCTGGTGGATGAGTGCTGGCGGATGGGGCTGAAAGTCCTGCCCCCAGACATAAACTCCGGtttt > 2:712730/1‑274 (MQ=255) aGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAAt > 1:235762/1‑89 (MQ=255) aGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAAt > 2:627509/1‑89 (MQ=255) gTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCa < 2:727721/91‑1 (MQ=255) gCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCa < 2:235760/89‑1 (MQ=255) gCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCa < 1:627523/89‑1 (MQ=255) aGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGCAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTATCCTGCGGAGTTTATGACGGCGGTAATGACCGCCGATATGGACAACACCGAGAAGGTGGCGGGTCTGGTGGATGAGTGCTGGCGGATGGGGCTGAAAATCCTGCCACCAGATATAAACTCCGGTCTTTACCATTTCCAc > 1:687228/1‑275 (MQ=255) aaTCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGAtt > 2:55400/1‑63 (MQ=255) aaCGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAAc < 1:55401/63‑1 (MQ=255) aCGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGaa > 1:449708/1‑40 (MQ=255) tGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTc < 2:449701/40‑1 (MQ=255) ggagtGGAGATGAAAATCGTCGGCATGGTGGGGAAATTTGCTGGTGTAGGATTTACTAGATTGCGCGCGGGGGCCTTTGGTTTGTTGTAATATCAAAAGTTATGGCTGAAAGCGCACTATCCTGCGGAGTTTATGGCGGCGGTAATGACCGCCGATATGGACAACACCGAGAAGGTGGTGGGTCTGGTGGATGAGTGCTGGCGGATGGGGCTGAAAATCCTGCCACCAGATATAAACTCCGGTCTTTACCATTTCCACGTCAACGACGACGGCg < 2:719027/270‑1 (MQ=255) ttGGCGATGAAAATCTTCGACCTGGTGTAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTCTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTATCCTGCGGAGTTTATGGCGGCGGTAATGACCGCCGATATGGACAACACCGAGAAGGTGGTGGGTCTGGTGGATGAGTGCTGGCGGATGGGGCTGAAAATCCTGCCACCAGCTATAAACTCCGGTCTTTACCATTTCCACGTCAACGACGACGGCGaaa < 1:712744/273‑1 (MQ=255) gACGTGGTGGAGGCATTAGTTGGNATCGGGTTTTACAAATCTCACTTAGCGGCTTATGCTTTGGTGTGCTATCAAACGTTATGGCTGAAAGCGCAGTATCCTGCGGAGTTTATGGCGGCTGTAATGACCTCCGATATTGACAACACCGAGAAGGTGGTGGGTCTGGTGGATGAGTGCTGGCGGATGGGGCTGAAAATCCTGCCACCAGATATAAACTCCGGTCTTTACCATTTCCACGTCAACGACGACGGCGAAATCGTGTATGGTATTGgcg < 2:428066/274‑1 (MQ=255) ggtggAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTATCCTGCGGAGTTTATGGCGGCGGTAATGACCGCCGATATGGACAACACCGAGAAGGTGGTGGGTCTGGTGGATGAGTGCTGGCGGATGGGGATGAAAATCCTGCCACCAGa > 1:11876/1‑204 (MQ=255) | CGGACGTACAGTGGCAGCATGAAAGCCTGAAACCGGTACTGGAGCCAACCTACGGCATTATCCTGTATCAGGAACAGGTCATGCAGATTGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTATCCTGCGGAGTTTATGGCGGCGGTAATGACCGCCGATATGGACAACACCGAGAAGGTGGTGGGTCTGGTGGATGAGTGCTGGCGGATGGGGCTGAAAATCCTGCCACCAGATATAAACTCCGGTCTTTACCATTTCCACGTCAACGACGACGGCGAAATCGTGTATGGTATTGGCG > CP009273/203603‑204121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |