Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009273	579903	579963	61	6 [4]	[5] 6	appY/ompT	global transcriptional activator; DLP12 prophage/DLP12 prophage; outer membrane protease VII (outer membrane protein 3b)

TTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTT  >  CP009273/579936‑580018                             |                                                       ttttttttGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTta                       >  2:563273/1‑62 (MQ=255)     ttttGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTataca                   <  1:563284/62‑1 (MQ=255)                       gAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGAt      >  2:227297/1‑57 (MQ=255)                         aCCATTAATTTGTAATTGGGTTGCTGTCGCCTAttt                         >  2:607838/1‑36 (MQ=255)                           cATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGtt  <  1:227301/57‑1 (MQ=255)                             ttAATTTGTAATTGGGTTGCTGTCGCCTATTTtata                     <  1:607849/36‑1 (MQ=255)                             |                                                       TTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTT  >  CP009273/579936‑580018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑