Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009273 2768272 2768298 27 2 [1] [1] 2 yfjW CP4‑57 prophage; putative inner membrane protein

TCGTAAAATAACTTATTTGCAATCTAAGCTAGAAATTTTTGGTTCTTCTATT  >  CP009273/2768224‑2768275
                                               |    
tCGTAAAATAACTTATTTGCAATCTAAGCTAGAAATTTTTGGttcttc      >  1:339357/1‑48 (MQ=255)
    aaaaTAACTTATTTGCAATCTAAGCTAGAAATTTTTGGTTCTTCtatt  <  2:339351/48‑1 (MQ=255)
                                               |    
TCGTAAAATAACTTATTTGCAATCTAAGCTAGAAATTTTTGGTTCTTCTATT  >  CP009273/2768224‑2768275

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: