Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009273	3354353	3354405	53	2 [1]	[1] 3	gltD/gltF	glutamate synthase, 4Fe‑4S protein, small subunit/periplasmic protein

TCCTATTTTTCAGCGCAAACATTCATGTAATGAATAATTATCACCACAA  >  CP009273/3354308‑3354356                                             |     tCCTATTTTTCAGCGCAAACATTCATGTAATGAATAATTATcacc      >  2:266886/1‑45 (MQ=255)     aTTTTTCAGCGCAAACATTCATGTAATGAATAATTATCACCACaa  <  1:266891/45‑1 (MQ=255)                                             |     TCCTATTTTTCAGCGCAAACATTCATGTAATGAATAATTATCACCACAA  >  CP009273/3354308‑3354356

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑