New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | 1444620 = | 17 (0.500) | 5 (0.150) | 4/308 | 2.4 | 30.2% | coding (987/2274 nt) | tynA | tyramine oxidase, copper‑requiring |
? | CP009273 | 1444886 = | 7 (0.210) | coding (721/2274 nt) | tynA | tyramine oxidase, copper‑requiring |
TAGTCACCAGAGTCCAGATACGCTTTAAAGTACCAGCCAATATCAGGATCACCGTAAGGCACAATCATGCCGCCGAGAGAACCTTCGTACATGACTTTGCGTTTGGTGCCATTGTCGTTATAAGTCACGGTGGAGATCATCGGCCCGACGCGAGAGTTCATGCTGAGGTGAAAATCCCAGTTCCGCCAGTGAATCATATCGCCAGTAATGGTGTAATTTTTACCTTCAGGCTCAATGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGC > CP009273/1444357‑1444868 | tactgagatctccctgctaccgccagataaagaagctgtctgggcgtttgcgctggaaaacaaaccggttgaccagccgcgcaaagccgacgtcattatgctcgacggcaaacatatcatcgaagcggtggtggatctgcaaaacaacaaactgctctcctggcaacccattaaagacgcccacggtatggtgttgctggatgatttcgccagtgtgcagaacattattaacaacagtgaagaatttgccgctgccgtgaagaaa > 1:66116‑M1/264‑265 (MQ=255) ccGTAAGGCACAATCATGCCGCCGAGAGAAACTTCGTACATGACATTGCGTTTGGTGCAATTGTCGTTATAGGTCACGGTGGAGAGCATCGGCCCGACGCGAGAGTTCATGCTGAGGTGAAAATCCCAGTTCCGCCAGTGAATCATATCGCCAGTAATGGGGTAATTTTTACCTTCAGGCTCAATGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGGCACGGCCATCAAATGGGCGTGCAGTCATTGGCACCGGAACTACCGGACattctac > 1:380404/1‑273 (MQ=255) gACTTTGCGTTTGGTGCCATTGTCGTTATAAGTCACGGTGGAGATCATCGGCCCGACGCGAGAGTTCATGCTGAGGTGAAAATCCCAGTTCCGCCAGTGAATCATATCGCCAGTAATGGTGTAATTTTTACCTTCAGGCTCAATGATTTGCATAGGCTTAACTGCCGGGGCAACGCGGTCCCGGCCACCAAATGGGGGTGCGGTCATTTGCACCGGGACTACCGGAACTGATGCAATCTTAACGAGTTTTTTCTGTTTTAAATAAACGaatcgcc > 2:595016/1‑269 (MQ=255) ctcttgctttccaGTCACGGTGGAGATCATCGGCCCGCCGCGATAGTTCATGCTGTGGTGATATTCCCAGTTCCTCCCGTGAATCATATCGCCAGTAATGGTGTAATTTTTAACGTCAGGCTCAATGATTTTAATAGGCGTGAGTGCCTGAGCAATGCGGTCACGGCCATCAAATGGGAGTGCGGTCATTGTCACCGGAACTACCGGACCTACTTCAATCTTAACGATTTTTTTCTATACTAAATCAACGACCGCGACCAGGTTTTCGATGGGAt < 2:45563/263‑1 (MQ=255) cGGTGGAGATCATCGGCCCGACGCGAGAGTTCATGCTGAGGTGAAAATCCCAGTTCCGCCAGTGAATCATATCGCCAGTAATGGTGTAATTTTTACCTTCAGGCTCAATGATTTGCATAGGCTTAACTGCCGGAGCAAcgcg > 1:304568/1‑142 (MQ=255) ggAGATCATCGGCCCGACGCGAGAGTTCATGCTGAGGTGAAAATCCCAGTTCCGCCAGTGAATCATATCGCCAGTAATGGTGTAATTTTTACCTTCAGGCTCAATGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCa < 2:304564/142‑1 (MQ=255) gCCCGACGCGAGAGTTCATGCTGAGGTGAAAATCCCAGTTCCGCCAGTGAATCATATCGCCAGTAATGGTGTAATTTTTACCTTCAGGCTCAATGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCa > 2:514699/1‑131 (MQ=255) gACGCGAGAGTTCATGCTGAGGTGAAAATCCCAGTTCCGCCAGTGAATCATATCGCCAGTAATGGTGTAATTTTTACCTTCAGGCTGAATGATTTGCATAGGTTTAACTGCCGGCGCAACGCGGTCACGGc < 1:514706/131‑1 (MQ=255) aCGCGATAGTTCATGCTGAGGTGAAAATGCCAGTTCCGCCAGTGGATCATATCGCCAGTAATGGTGTAATTTTTACCTTCAGGCTCAATGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTAATTGGCa > 1:498077/1‑157 (MQ=255) gagaGTTCATGCTGAGGTGAAAATCCCAGTTCCGCCAGTGAATCATATCGCCAGTAATGGTGTAATTTTTACCTTCAGGCTCAATGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCgg < 2:498070/157‑1 (MQ=255) agagTTCATGCTGAGGTGAAAATCCCAGTTCCGCCAGTGAATCATATCGCCAGTAATGGTGTAATTTTTACCTTCAGGCTCAATGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTTCTAAATCACCGACCGCCACCAGGTTTTCGATGGGATGGTCCAAGTAGTTGCCACCACCGACATCAAGATACCtgatg > 2:48795/1‑274 (MQ=255) ttCATGCTGAGGTTAATATCCCAGTTCCGCCAGTTAATCATATCGCCAGTAATGGTGTAATTTTTACCTTCAGGCTCAATGATTTGCATAGTCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACt < 1:48796/273‑1 (MQ=255) tgctggatgatttcGCCAGTGAATCAGATCGCCAGTAATGGTGTAATTTTTACCTTCAGGCTCAATGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGCTTTATTTCTGTTCTAANTCAACGACNGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAAATAGTTGATGACTTTGAGCAACCGGGCa > 1:459118/14‑274 (MQ=255) ggtgttgctggatgatttcgccagtgtgcagaacattattaacaacagtgaagaatttgccgctgccgtgaagaaa < 1:55289‑M1/2‑1 (MQ=255) ttgctggatgatttcgccagtgtgcagaacattattaacaacagtgaagaatttgccgctgccgtgaagaAAcgcg > 2:55288‑M1/71‑76 (MQ=255) tgctggatgatttcgccagtgtgcagaacattattaacaacagtgaagaatttgccgctgccgtgaagaAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATATCTGGTGACTTGTAGCAACAGGGCANCTTTTTTCACACCATCTTCACCAt < 2:394287‑M1/206‑1 (MQ=255) aaTTTTTCCCTGCAGCCTCATTGATTTGCATAGGCTTAACCGCCGGAGCAACGCGTTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCNTAACGATTTTTATCCGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAgc < 1:595025/275‑1 (MQ=255) aCCTTCAGGCTCAATGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTTCTAACTCAACGACCGCCCCCAGGTTTTAGATGGGTTGTGCCCAGTAGTTACCATCACCGACATCAAGATAGCTTATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATa > 1:348510/1‑255 (MQ=255) aCCTTCAGGCTCAATGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCAACATCAAGATAGCTGATAACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCACCGACATAACCTAAGGTCAGCGACGTg > 1:416278/1‑274 (MQ=255) attattaacaacagtgaagaatttgccgctgccgtgaagaAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCagta < 2:346368‑M1/132‑1 (MQ=255) ttaacaacagtgaagaatttgccgctgccgtgaagaAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTg > 1:346372‑M1/37‑172 (MQ=255) tgaagaatttgccgctgccgtgaagaAACGCGTTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGc > 1:394291‑M1/27‑275 (MQ=255) ggaattggcctctgccgtgaagaATCGCTGTCACGTCCATCAAATGGGCGTGCGTTCATTGGCACCGTAACTACCGGACCTTCTTCAATCTGAAGTATTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGTATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGc > 1:371566‑M1/24‑272 (MQ=255) gCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTAcc > 2:432127/1‑68 (MQ=255) aaCTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGAc < 1:432132/68‑1 (MQ=255) | TAGTCACCAGAGTCCAGATACGCTTTAAAGTACCAGCCAATATCAGGATCACCGTAAGGCACAATCATGCCGCCGAGAGAACCTTCGTACATGACTTTGCGTTTGGTGCCATTGTCGTTATAAGTCACGGTGGAGATCATCGGCCCGACGCGAGAGTTCATGCTGAGGTGAAAATCCCAGTTCCGCCAGTGAATCATATCGCCAGTAATGGTGTAATTTTTACCTTCAGGCTCAATGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGC > CP009273/1444357‑1444868 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |