| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,496,742 | A→G | 7.8% | pseudogene (65/249 nt) | yjhE → | pseudogene, KpLE2 phage‑like element |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,496,742 | 0 | A | G | 7.8% | 154.8 / 4.1 | 51 | pseudogene (65/249 nt) | yjhE | pseudogene, KpLE2 phage‑like element |
| Reads supporting (aligned to +/- strand): ref base A (22/25); new base G (2/2); total (24/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.49e-01 | |||||||||||
CAGACGCTGGTGACGATGATGCCAAGTAGTGACTCTTCCGAATAAGGTTCCCACTGACCAATTGGCGCGCGCTTCGCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGACGTTCTTCATGCGTCCAGATAAGTCATTGTAAAAGTCGAATCAGGGCTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAG > CP009273/4496519‑4497005 | cAGACGCTGGTGACGATGATGCCAAGTAGTGACTCTTCCGAATAAGGTTCCCACTGACCAATTGGCGCGCGCTTCGCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATCTTACGACGATGTATGGGGGAATAGCCAGCGGATGGGTGAACGCCGGGTCCGGTggggcggaac > 1:31609/1‑265 (MQ=255) gTGACGATGATGCCAAGTAGTGACTCTTCCGAATAAGGTTCCCACTGACCAATTGGCGCGCGCTTCGCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTCGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCAc < 1:447486/274‑1 (MQ=255) gcgatggagaaaTTGGTGCCGGATTCGCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATGCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACAGTGCTGGCCGATGAGCTGACCATTGGGACTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTACGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTg < 1:63891/264‑1 (MQ=255) aCCAATTGGCGCGCGCTTCGCAATAAAATCTCCCTTCGCCCATTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTAc < 1:393487/275‑1 (MQ=255) ctaannnnccgctcCCTTCNCCCATTATTGGGTAATGTGATTCCATACACATTGTGTCCGTTTTGTCGTTTCCAGGTTCACGACATGGCTGGCCGCTGAGCTGACCATTGAGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGtt < 2:31609/258‑1 (MQ=255) cccTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAAtt > 1:62013/1‑147 (MQ=255) cTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAAtt > 2:500005/1‑145 (MQ=255) tCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCa < 2:62012/147‑1 (MQ=255) cGCCCATTTTTGGGAAAAGTAGTTTCATTCAAACTATGTACGCTGTTTCGTCTCACAGTTCACGGCATTGCTGGCCTATTAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTANGCCGAAGTATGTCGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGta < 1:613275/275‑1 (MQ=255) gataggTATTGGGAAAAGTATATACATTTAAACTGTGTACTGTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCAGTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCTGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTGGCATTGCTTGTTATTGGta < 1:579177/269‑1 (MQ=255) gCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGCTATTACGCCGAAGTATGTGGGAATTGCCa < 1:500011/145‑1 (MQ=255) gTATTGGGAAAAGTAGATAGATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGcc > 1:593406/1‑172 (MQ=255) tGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACa < 2:593399/172‑1 (MQ=255) aGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGTCGACATTATTTCACCTATCGCCATTGGCATTATTATCGACAAAAAAGGCAACTGGAGTTTACCCTTCTACGGTTACCATCG‑ATTGCTTTTTTTTGGTATTNNCNttatttttttt > 2:579170/1‑265 (MQ=255) tACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGTCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGACGTTCTTCATGCGt < 1:409496/275‑1 (MQ=255) tgtACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGACGTTCTTCATGCGt < 2:40378/262‑1 (MQ=255) tgtACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGACGTTCTTCATGCGt > 1:40379/1‑262 (MQ=255) tgtACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCCGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGGCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGCAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGACGTTCTTCATGCGTCCAAATAAGtat > 1:661315/1‑272 (MQ=255) cTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCAc > 1:36879/1‑149 (MQ=255) gTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATtgatga > 1:288492/1‑114 (MQ=255) ttCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTg > 2:586513/1‑127 (MQ=255) ttCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTAt < 2:36879/149‑1 (MQ=255) ttCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCttt > 2:457913/1‑156 (MQ=255) cGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGc < 2:288488/114‑1 (MQ=255) tctcACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCa < 1:457919/156‑1 (MQ=255) caGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCt > 2:661682/1‑190 (MQ=255) ttCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTGTGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTAt > 1:575306/1‑212 (MQ=255) tCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTATCATTCTACgg < 1:661691/190‑1 (MQ=255) cGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTGTGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGt < 2:575299/212‑1 (MQ=255) acaggatGGGCGCTGAGCTGACCGTTGGGACTTGCCTGGCTGTGCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCTGATTTATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACATGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGACGTTCTTCATGCGTCCAGATAAGTCATTGTAAAAGTCGAATCAGGGCTGAAGTgg < 2:180448/268‑1 (MQ=255) tGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCAc > 1:281337/1‑123 (MQ=255) ggCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTAt < 2:281333/123‑1 (MQ=255) aGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGACGTTCTTCATGCGTCCAGATAAGTCATTGTAAAAGTCGAATCAGGGCTGaa > 1:180450/1‑255 (MQ=255) aCCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTc > 1:325416/1‑195 (MQ=255) aTTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGAt > 1:315195/1‑64 (MQ=255) ttGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGa < 2:325411/195‑1 (MQ=255) ggCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATtgat < 2:315190/64‑1 (MQ=255) ggCTGTCCCGATGGATATTACGCCTAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTNTCTCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGACGTTCTTCATGCGTCCAGATAAGTCATTGTAAAAGTCGAATCAGGGCTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCt < 1:565504/275‑1 (MQ=255) tCCCGATGGATATTTCGCCGAAGTATGTGGGGATTGCCAGCGTATTGTTGAACGCCTGTTCCGCTGTCGCCGACATTATTTCACCTATTGCCTGTGGCATTATTATCGCCAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGACGTTCTTCATGCGTCCAGATAAGTCATTGTAAAAGTCGAATCAGGGCTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCt < 1:275148/275‑1 (MQ=255) tCCCGATGGATATTACGCCGAAGTGTGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGACGttc > 2:613440/1‑182 (MQ=255) tCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTNTTATTGGTATATTCCTGACGTTCTTCATTCGTCCAGATAAGTCATTGTAAAAGTCGAATCAGGGCTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAggctgtctcttatac > 1:647576/1‑261 (MQ=255) tCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTAtt > 2:200109/1‑164 (MQ=255) cccGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTgg > 2:100365/1‑124 (MQ=255) gATGGATATTACGCCGAAGTGTGTGGGAATTGCCAGCGGATTCATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGACGTTCTTCa < 1:613448/182‑1 (MQ=255) gATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGta < 1:200112/164‑1 (MQ=255) gATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGACGTTCTTCATGCGTCCAGATAAGTCATTGTAAAAGTCGAATCAGGGCTGAAGTGGCACACTGAATTTGGCCAc < 2:647568/246‑1 (MQ=255) aTGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGtt < 1:100366/124‑1 (MQ=255) aTGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGACGTTCTTTCTGCCTCCCGATAAGTCATTTTAAAAGTCGAATCAGGGCTGCAGTGGAAACATGAATTTGGCAACCTTACCAGCGGttcttttctncc > 2:275144/1‑257 (MQ=255) tatTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGACGTTCTTCATGCGTCCAGATAAGTCATTGTAAAAGTCGAATCAGGGCTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAaccaca > 2:308259/1‑275 (MQ=255) gtataggagacagaTGTGGTAATTGCCAGCGGATTGATGAACGCCGGTTGCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAAATGGAGTTTNCCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTTGTATATTCCTGACGTTCTTCATGCGTCCAGATAAGTCATTGTAAAAGTCGAATCAGGGCTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaacaa < 1:621340/259‑1 (MQ=255) tACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTTCTTGTTATTGGTATATTCTTGACGTTCTTCATGCGTCCAGATAAGTCCTTGTAAAAGTCGAATCAGGGCTGAAGTGGCACACTGAATTTGACCACCTGAACAGATGATATATGCCTACCTCAGaacaaaattc > 2:603125/1‑270 (MQ=255) ccGAAGTATGTGGGAATTTCCAGCGTATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTCGCATTATTATCGACAAAACAGGCAACTGGNTTTTACCATTCTACGGTT‑CCGTCGCATTTCTTGTTATTGGTATATTCCTGACTTTCTTCATGCGTCCAGATAAGTCATTGTAAAAGTCGAATCAGGGCTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAg < 1:603132/261‑1 (MQ=255) | CAGACGCTGGTGACGATGATGCCAAGTAGTGACTCTTCCGAATAAGGTTCCCACTGACCAATTGGCGCGCGCTTCGCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTT‑CCGTCGCATTGCTTGTTATTGGTATATTCCTGACGTTCTTCATGCGTCCAGATAAGTCATTGTAAAAGTCGAATCAGGGCTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAG > CP009273/4496519‑4497005 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |