Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,483,4310GT25.5% 253.6 / 19.5 106G315C (GGT→TGT) aldAaldehyde dehydrogenase A, NAD‑linked
Reads supporting (aligned to +/- strand):  ref base G (19/60);  new base T (27/0);  total (46/60)
Fisher's exact test for biased strand distribution p-value = 3.53e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.29e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 111 total aligned reads displayed.

CAGTCAAAGCCATCGTTGATTCACGCGTCATTAATAGTGGGCAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCAAAGCGGTAGAGGGGA  >  CP009273/1483294‑1483569
                                                                                                                                         |                                                                                                                                            
cAGTCAAAGCCATCGTTGATTCACGCGTCATTAATAGTGGGCAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTgg                                                                                                                                             >  1:1270782/1‑139 (MQ=255)
             cGTTGATTCACGCGTCATTAATAGTGGGCAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATAAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAAACCCGGTgg                                                                                                                                 >  1:1777781/1‑137 (MQ=255)
                       cgcgTCATTAATAGTGGGCAAGTGTGTAACTGTGCAGAACGTGTTTATGGACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTGCATTTGGGAAACCCCCTGTAGGGAACGAc                                                                                                                       >  1:3999233/1‑138 (MQ=255)
                         cgTCATTAATAGTGGGCAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAAATTGGTAACCCCGCTGAAAGCAACGACAtt                                                                                                                    >  1:1131661/1‑139 (MQ=255)
                            cATTAATAGTGGGCAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCg                                                                                                                                     <  1:3667577/119‑1 (MQ=255)
                             aTTAATAGTGGGCAAGTGTGTACCTTTTCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCTGTTCAATTTGGTAACCCCGCTGCACGCAATGACATTGCGa                                                                                                                <  1:5141170/139‑1 (MQ=255)
                                aaTAGTGGGCAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑gg                                                                                                            <  1:156533/139‑1 (MQ=255)
                                  tAGTGGGCAAGTGTGTAACTGTGCAGAGCGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTaa                                                                                                                                          <  1:4886962/108‑1 (MQ=255)
                                      ggtcAAGTGTGTAACTGTGCAGAGCGTGTTTATGAACAGAAAGGCATTTATGATCAGTTCGGCAATCGGCTGGGTGAAGCGATGCAAGCGGTTTAATTTTTTAACCCCGCTGAACGGAACGAAATTGCGAT‑GGGGCCGt                                                                                                      >  1:2562430/4‑139 (MQ=255)
                                      ggtcAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGGAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTTCATGTGGGAAACCCGCTGAAGGCAACGACAATGCGAA‑GGGGGCGt                                                                                                      >  1:1957508/4‑139 (MQ=255)
                                      gggCAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTTTTAAACCCCCCGAACGCCACGCGATTGTGAG‑GGGGGCgg                                                                                                      >  1:4833175/1‑138 (MQ=255)
                                      gggCAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCg                                                                                                       <  1:2230577/138‑1 (MQ=255)
                                      gggCAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCCCCGAACGCCACGACAATGCGGT‑GGGGCCgg                                                                                                      >  1:3141347/1‑138 (MQ=255)
                                       ggCAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTTCATTTTGGGATCCCGCCGCTCGCCACGGCATTTGGCT‑GGGGCCggt                                                                                                     >  1:2739451/1‑137 (MQ=255)
                                       ggCAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTTGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGGCGtt                                                                                                     >  1:324525/1‑139 (MQ=255)
                                       ggCAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTTGGAACCCCGCTGAACGCAAAGACATTGCGGT‑GGGGCCggt                                                                                                     >  1:2524474/1‑137 (MQ=255)
                                           aGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTTAATTTTGTATCCCCCCTGGACGCAACCGCAATTCGAT‑GGGGCCGGTGGtt                                                                                                 >  1:4739256/1‑139 (MQ=255)
                                             tgtgtAACTGTGCAGAACGTATTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCaa                                                                                                                           <  1:2351829/112‑1 (MQ=255)
                                                 tAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGCT‑GGGGCCGTTGATTAAcgcc                                                                                           >  1:733416/1‑139 (MQ=255)
                                                  aaCTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACTCAACGACATTGCGAT‑GGGGCCGTTGATTAAcgccg                                                                                          <  1:2962442/139‑1 (MQ=255)
                                                    cTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCcgcg                                                                                        <  1:2153606/139‑1 (MQ=255)
                                                    cTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCcgcg                                                                                        <  1:723463/139‑1 (MQ=255)
                                                       tgCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTTGTAAACCCGCTGAACGCCACCACATTGCGCT‑GGGGCCGTTGATTAACGCCgcggc                                                                                      >  1:2419677/1‑138 (MQ=255)
                                                       tgCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGGaa                                                                                                                                          >  1:1895677/1‑87 (MQ=255)
                                                       tgCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAAATTGGTAACCCCCCTTCACGCCACAGCATTTCGAT‑GGGGGCGGTTATTAAAGCCgcggcg                                                                                     >  1:3715456/1‑139 (MQ=255)
                                                        gCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACTCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCgcggc                                                                                      >  1:379858/1‑137 (MQ=255)
                                                        gCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCgcggcg                                                                                     <  1:2241646/138‑1 (MQ=255)
                                                            aaCGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGGACGCAACGGCCTTTCGAT‑GGGGCCGTTGATTAACGCCCCGGCG‑CTggg                                                                               >  1:739293/1‑138 (MQ=255)
                                                            aaCGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGATCCACATTGTAACCCCCCTGAACTCGACGACATTGCGAT‑GGGGGCGGTTTGTAACGCCGCCgcg‑cctgg                                                                               >  1:4856812/1‑135 (MQ=255)
                                                                tgtTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCaa                                                                                                                           <  1:167308/93‑1 (MQ=255)
                                                                tgtTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAAATTTGTAAACCCCCTGAACGCCACGACATTGCGGA‑GGGGGCGGTGTGTAACGCCGCCGCGCCTGGaagg                                                                            >  1:5069127/1‑137 (MQ=255)
                                                                  tttATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCgcggcg                                                                                     <  1:1235918/128‑1 (MQ=255)
                                                                   ttATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCaa                                                                                                                           <  1:1650579/90‑1 (MQ=255)
                                                                        tACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCCATTTTGTAACCCCCCCGAACGCCACGCCAATTCGGT‑GGGGGCGGTGGTTAACGCCCCGGGG‑CTGGAAAGgggcgggcg                                                                   >  1:4583725/1‑138 (MQ=255)
                                                                          cAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCTATTTTGTAACCCCGCCGAAGGCAACGACATTGCGGT‑GGGGGCGGTGATTTACGCCGCGGGG‑CTGGAGAGGGGCGGGCaaa                                                                 >  1:4679409/1‑139 (MQ=255)
                                                                             aaaGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTTCATTTTGTAACCCCCCTGCACCCCAAGGAATTTCGGT‑GTGGTCGTTGGTTCACCCCGCCGCG‑CTGGAGAGGTGAGAGCacaaac                                                              >  1:4472355/1‑138 (MQ=255)
                                                                                ggCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTTGTAACCCCCCTGAACGCAACGACATTTCGAT‑GGGGCCGTTGGTTAAAACCGCGGCG‑CTGGAAAGGGGGGGGCaaaaaaagg                                                           >  1:3732086/1‑135 (MQ=255)
                                                                                 gCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAAcgccg                                                                                          <  1:4797055/108‑1 (MQ=255)
                                                                                  cATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTTTATATTGTTATCCCTCTGAACACTACGAAATATTGAT‑GGGCGCGGTTATTTACGCCGCGGGG‑GTGGGAAGGGGCGGACaaaaaaagggg                                                         >  1:2853823/1‑133 (MQ=255)
                                                                                  cATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTTGTAAACCCCCCGAAAGCCACGACATTGCGGTGGGGGCGGTTGTTTAA‑GCCCCGGCG‑CGGGGAAGGGGCGGGCAAAAAGAgggc                                                         >  1:2824144/1‑137 (MQ=255)
                                                                                  cATTTATGATAAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAAcgccg                                                                                          <  1:1420607/107‑1 (MQ=255)
                                                                                    tttATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCg                                                                                                                 <  1:1204547/83‑1 (MQ=255)
                                                                                    tttATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGgcgct                                                       <  1:4041144/139‑2 (MQ=255)
                                                                                    tttATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGgcgcg                                                       <  1:1021184/139‑1 (MQ=255)
                                                                                    tttATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGAAAAAAGTGgcgcg                                                       <  1:2211698/139‑1 (MQ=255)
                                                                                     ttATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTTAATTTTGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGGTGATTAACGCCGCGGCG‑CTGGAAAGGGGCGAGCCAAAAGTGgcgcgc                                                      >  1:1084139/1‑139 (MQ=255)
                                                                                     ttATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTTGTAACCCCCGTGCAAGCCACGAAATTGGGGT‑GGGGCCGGTTATTAAAGCCGCGGCG‑CTGGAAAGGGGTGAGTAAAAAGAGgcgggg                                                      >  1:3596047/1‑136 (MQ=255)
                                                                                     ttATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTg                                                                                                                                  <  1:2619793/65‑1 (MQ=255)
                                                                                     ttATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCaa                                                                                                                           <  1:832803/72‑1 (MQ=255)
                                                                                     ttATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAAc                                                                                                                          <  1:2697914/73‑1 (MQ=255)
                                                                                     ttATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAAcgccg                                                                                          <  1:4074538/104‑1 (MQ=255)
                                                                                      tATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGGCGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GTGGCCGTTGATTACCGCCGCGGCG‑CTCGAAAGGGTCGAGCAAAAAGTGgcgcgcg                                                     <  1:5100069/139‑1 (MQ=255)
                                                                                      tATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGgcgcgcg                                                     <  1:790366/139‑1 (MQ=255)
                                                                                      tATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGgcgcgcg                                                     <  1:1014307/139‑1 (MQ=255)
                                                                                      tATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGgcgcgcg                                                     <  1:2342964/139‑1 (MQ=255)
                                                                                      tATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGgcgcgcg                                                     <  1:1418207/139‑1 (MQ=255)
                                                                                      tATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGgcgcgcg                                                     <  1:1658621/139‑1 (MQ=255)
                                                                                      tATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACACCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGgcgcgcg                                                     <  1:2965896/139‑1 (MQ=255)
                                                                                      tATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACAGTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGgcgcgcg                                                     <  1:4516445/139‑1 (MQ=255)
                                                                                      tATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTAAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGgcgcgcg                                                     <  1:745691/139‑1 (MQ=255)
                                                                                       aTGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTTAATTTTGTAACCCCCCCGAACGCAACGACCTTGCGGT‑GGGGGCGTTGATTAACGCCCCGGCG‑CTGGGAAGGGTCGAGCAAAAAATGgcgcgcgc                                                    >  1:3867531/1‑139 (MQ=255)
                                                                                       aTGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGgcgcgcgc                                                    <  1:3852100/139‑1 (MQ=255)
                                                                                        tGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCa                                                   <  1:1604897/139‑1 (MQ=255)
                                                                                        tGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCa                                                   <  1:1892232/139‑1 (MQ=255)
                                                                                           tCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTTGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTggg                                                                               >  1:2217667/1‑107 (MQ=255)
                                                                                           tCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTTGTAAACCCCCTGAACGCAACGACATTGCGAT‑GGGGGCGTTGGTTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGGGGCGCGCGCAgga                                                >  1:281102/1‑137 (MQ=255)
                                                                                           tCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTTACCCCGCTGTACGCAACGGCATTGCGGT‑GGGGTCGTTGATTTAAGCCGCGGCG‑CCGGGAAAGGGCGCGCAAAAAGAGgcgggcgccgga                                                >  1:3803927/1‑135 (MQ=255)
                                                                                            aaGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCCCTGAACGCAACGACATTGCGAT‑TGGGCCGTTGGTTAAAGCCGCGGCG‑CTGGa                                                                               >  1:4001631/2‑107 (MQ=255)
                                                                                             aGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTTGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAAAGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGAGGCGCGCGCAGTaga                                              >  1:2189169/1‑139 (MQ=255)
                                                                                               ttCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCCGAACGCAACGACATTGCGa                                                                                                                >  1:114912/1‑73 (MQ=255)
                                                                                               ttCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAAACCCGCTGAACGCAACGa                                                                                                                        >  1:36646/1‑65 (MQ=255)
                                                                                               ttCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGCTCCATTTTGTAAACCCGGTGGACGGAACGACCATGGGAT‑GGGGCCGTTGATTAACCCCGCGGGG‑GTGGAAAAGGGCGAGCCAACAAGGGGGCGCGCAGGagcag                                            >  1:1013770/1‑139 (MQ=255)
                                                                                                tCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCgcggcg                                                                                     <  1:3621702/98‑1 (MQ=255)
                                                                                                tCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTagaaga                                           <  1:3300689/139‑1 (MQ=255)
                                                                                                tCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTagaaga                                           <  1:241333/139‑1 (MQ=255)
                                                                                                 cGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCTCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGgcgcg                                                       <  1:4461799/126‑1 (MQ=255)
                                                                                                 cGTCAATCGGCTGGGTGAAGCGATGCAGGCGGATCAATTTGGTAACCCCGCTGAACGCAAAGACATTGCGGT‑GGGGGCGTTGGTTAAAGCCGCGGGG‑CTGGAAAGGGGCGGGCAAAAAAGGGGGCGCGGAGGagaagga                                          >  1:3525994/1‑137 (MQ=255)
                                                                                                  gTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAAcgccg                                                                                          <  1:3194568/91‑1 (MQ=255)
                                                                                                       tCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑TGGGCCGTTTGTTAACCCCCCGGGG‑GTGGAAAGGGTCGGGCAAAAAAGGGGGGGCGCAGTAGAAGAAgggggg                                    >  1:575459/1‑137 (MQ=255)
                                                                                                          gCTGGGTGAAGCGATGCAGGCGGGTCAATTTTGTAACCCCGCCGAACGCAACGAGAATGCGGT‑GGGGGCGTTGATTAACGCCGCGGGG‑CTGGGAAggg                                                                          >  1:1040024/1‑98 (MQ=255)
                                                                                                            tGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGagag                                <  1:2490263/138‑1 (MQ=255)
                                                                                                            tGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGagag                                <  1:2003936/138‑1 (MQ=255)
                                                                                                              ggTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCcgcg                                                                                        <  1:3204145/81‑1 (MQ=255)
                                                                                                                           aGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCa                 <  1:3776627/138‑1 (MQ=255)
                                                                                                                           aGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCa                 <  1:2995911/138‑1 (MQ=255)
                                                                                                                           aGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCa                 <  1:4998656/138‑1 (MQ=255)
                                                                                                                             gCGGTTCAATTTGGTAACCCCCCTGGACGCAACGACATTGCGAT‑GGGGCCGTTGGTTAACGCCGCGGCG‑CTGGGAAGGGTCGCGCAAAAAGTGGGGCGCGCCGTAGAAGAAAGGGGGGGAGGGGCGGTCGGTggggaa               >  1:3307421/1‑134 (MQ=255)
                                                                                                                              cGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCaaa               <  1:1286227/137‑1 (MQ=255)
                                                                                                                                 ttCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCgcggcg                                                                                     <  1:2079325/65‑1 (MQ=255)
                                                                                                                                 ttCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCgg                      <  1:747413/127‑1 (MQ=255)
                                                                                                                                  tCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCAAAGCGGt          <  1:1222522/138‑1 (MQ=255)
                                                                                                                                  tCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCAAAGCGGTa         <  1:4767442/139‑1 (MQ=255)
                                                                                                                                  tCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCAAAGCGGTa         <  1:4026892/139‑1 (MQ=255)
                                                                                                                                   cAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCAAAGCGGTag        <  1:2907195/139‑1 (MQ=255)
                                                                                                                                     aTTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCAAAGCGGTagag      <  1:2253854/139‑1 (MQ=255)
                                                                                                                                        tGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCAAAGCGGTAGAgggg   <  1:4298/139‑1 (MQ=255)
                                                                                                                                         ggTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCAAAGCGGTAGAGGGGa  <  1:2099769/139‑1 (MQ=255)
                                                                                                                                         ggTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCAAAGCGGTAGAGGGGa  <  1:4768616/139‑1 (MQ=255)
                                                                                                                                         ggTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCAAAGCGGTAGAGGGGa  <  1:935136/139‑1 (MQ=255)
                                                                                                                                         ggTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCAAAGCGGTAGAGGGGa  <  1:944207/139‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                            
CAGTCAAAGCCATCGTTGATTCACGCGTCATTAATAGTGGGCAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGAT‑GGGGCCGTTGATTAACGCCGCGGCG‑CTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCAAAGCGGTAGAGGGGA  >  CP009273/1483294‑1483569

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑