| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 360104 = | 33 (0.470) | 10 (0.010) +AATTCCCC |
9/214 | 2.6 | 24.6% | intergenic (‑38/+557) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor |
| ? | KX077536 | 8127 = | NA (NA) | intergenic (+52/–) | unknown/– | cat/– | |||||
TTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCC > CP009273/359971‑360241 | tgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattaatt < 1:3939809‑M1/4‑1 (MQ=255) caatcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTg < 1:732791/139‑1 (MQ=255) ttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTgg > 1:1113297‑M1/131‑139 (MQ=255) tGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTa > 1:3284961/1‑139 (MQ=255) cgttcaaatccgctcacggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTa < 1:2446393‑M1/16‑1 (MQ=255) ttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATg < 1:4247437‑M1/18‑1 (MQ=255) aaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataacacgaaaggcccagtctttcgactgagcctttcgttttatttgctgcctggggaattAATTCCTGGCAGTTTATggcg < 1:4018466‑M1/21‑1 (MQ=255) tgtgGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggcc > 1:2895709/1‑138 (MQ=255) tgtgGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggag > 1:2923338/1‑137 (MQ=255) gtgGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATCCCTGGCAGTTTATggcgggcg > 1:102346/1‑138 (MQ=255) ggAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTc < 1:2258909/138‑1 (MQ=255) ggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttccactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGcc > 1:273478‑M1/104‑139 (MQ=255) tCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGcc > 1:1081345/1‑138 (MQ=255) gCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg < 1:977436/104‑1 (MQ=255) cccTTCACCGCTTGCCAGCAGCTTGCCAGCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGACCCCCAATTCCTTGAAGTTTACGGCGGACGTCC‑TGCCAGCCACccgccg < 1:3851037/136‑1 (MQ=255) tactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCa > 1:1066486‑M1/94‑130 (MQ=255) tactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCa > 1:1443842‑M1/94‑130 (MQ=255) ctcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGcc > 1:2383214‑M1/92‑127 (MQ=255) tCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCg < 1:207497/139‑1 (MQ=255) cACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCTTGCcccccccccccccgcccc > 1:2380517/1‑133 (MQ=255) gCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATgg > 1:3149309/1‑104 (MQ=255) cgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGGCC‑TGCCCCCCACCCCCCggg < 1:210197‑M1/46‑1 (MQ=255) cgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagccttacgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGATGACC‑GTCCTGCCCCCCTCCCTGccgttgactcc < 1:1963605‑M1/57‑6 (MQ=255) cAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGACCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCa < 1:3021897/138‑1 (MQ=255) tcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCCCCCCCCTCCCGGCCGTTTCTTCGCAAc < 1:1171139‑M1/61‑1 (MQ=255) caaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCa > 1:95191‑M1/72‑130 (MQ=255) acaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGGGTCC‑TGCCCACCACCCTCCCGGCCGTTGCTTCGCAACGTTCAAATc < 1:2023408‑M1/70‑1 (MQ=255) caacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCg > 1:2077748‑M1/68‑139 (MQ=255) acagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCt > 1:1848281‑M1/66‑139 (MQ=255) gcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCcgg < 1:705070/139‑1 (MQ=255) ccAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTg < 1:751157/139‑1 (MQ=255) aaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattaat < 1:1446300‑M1/3‑1 (MQ=255) aggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGgtttt < 1:1327652‑M1/87‑2 (MQ=255) tGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAt < 1:993979/132‑1 (MQ=255) cccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTc > 1:1468173‑M1/49‑137 (MQ=255) cccagtctttcgactgagcctttcgttttattggatgccgggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTc > 1:3342665‑M1/49‑137 (MQ=255) gCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTc < 1:723472/136‑1 (MQ=255) cAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCa < 1:1870504/83‑1 (MQ=255) tctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCa > 1:2555321‑M1/44‑109 (MQ=255) aGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATCCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACt < 1:2275512/136‑1 (MQ=255) tcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGGCC‑TGCCCCGCCCCCTCCGGGCCGTTGGTTTGCAACGGTCAAATCCGCTCCCGCGGGATTTTTCCTACTcagggg < 1:1395305‑M1/100‑3 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAGTGCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGga < 1:3883859/138‑1 (MQ=255) ccGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCCCCCGGCCGTTGCCTCGCAACGTTTAAATCCGCCCCCCGCGGATTTGTCCTACCCCGgaga > 1:1716988/1‑139 (MQ=18) gagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TTCCCGCCACCCTCCGGGCCGGTGCTTCGCAACGTTCCAATTCGCTCCCCGCGGGTTTGTCCTACTCCGGAGAGCGt < 1:367597‑M1/105‑1 (MQ=255) gagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTTCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGt < 1:181021‑M1/105‑1 (MQ=255) gagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTcc < 1:382578‑M1/76‑1 (MQ=255) gagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGtt > 1:3930707‑M1/34‑139 (MQ=255) agcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGGTTCGCAACGTTCAAATCCGCTCCCGGGGGATTTGTCCTACtcaggagaggggtc < 1:690028‑M1/107‑6 (MQ=255) agcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCCCTCCCGGCGGGTTTGTCCTACTCAGGAGAGCGTTc < 1:1607731‑M1/107‑1 (MQ=255) cTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGc < 1:378357/74‑1 (MQ=255) cTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGGTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGGTTTGTCCTACTCAGGAGAGCGTTCACCg > 1:1760383/1‑138 (MQ=255) tcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGac > 1:1769499‑M1/27‑139 (MQ=255) tGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGac < 1:776078/139‑1 (MQ=255) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGaca < 1:35844/139‑1 (MQ=255) tCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCt < 1:4236192/115‑1 (MQ=255) tCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCCCCCGGCCGTTGCTTCGCAAAGTTCAAATCCGCTCCCGGCGGGTTTGTCCTACTCAGGAGAGCGTTCCCCCacaa > 1:651234/1‑139 (MQ=17) tttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGacaaac > 1:1928297‑M1/23‑139 (MQ=255) ttatttgatgccgggggaattAATGCCTCGCAGTTTCTCCCGTGCTTCC‑GGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGacaaaca > 1:4133486‑M1/22‑139 (MQ=255) tatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGacaaacaa > 1:1572188‑M1/21‑139 (MQ=255) gagaATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGtt < 1:3416395/67‑1 (MQ=255) gagaATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAAGTTCAAATCCGCCCCCGGCGGGTTTGTCCTACTCAGGAGAGGGTTCACCGACAAACAAAAGa > 1:797271/1‑139 (MQ=14) gaATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGGTTTGTCCTACTCAGgaga > 1:2066486/1‑115 (MQ=255) tgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCAc > 1:908568‑M1/14‑122 (MQ=255) ggggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCCCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCCCCCCCGCCCGGTTTGTCCTACTCAGGGGAGCGTTCACCGGCAAAAAAAAGATAAaacaa < 1:162076‑M1/131‑3 (MQ=255) cGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCCCCCGGCCGTTGCTTCGCAACGGTCAAATCCGCTCCCCGCGGGTTTGTCCTACTCAGGAGCG‑GTCCA‑CGACAAAAAAAAGATAAAACGaaa > 1:920947/1‑139 (MQ=14) gggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACt > 1:4191377‑M1/8‑101 (MQ=255) ggaattAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGaa > 1:2060501‑M1/7‑138 (MQ=255) attAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTc > 1:537962‑M1/4‑92 (MQ=255) attAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCg > 1:2254671‑M1/4‑107 (MQ=255) ttAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGTTTTTCAACGGTCAAATCCGCTCCCCGCGGATTTGTCCTCCTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGc < 1:1701748‑M1/136‑1 (MQ=255) tAATTCCTGGCAGTTTCTTGCGGGCGTCC‑CGCCCGCCCCCCCCCGGGCCGTTGCTTCGCAACGTTCAAATCCCCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGccc > 1:1168517‑M1/2‑139 (MQ=255) tAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGccc > 1:1850062‑M1/2‑139 (MQ=255) cAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCCCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGccc < 1:2969396/139‑1 (MQ=18) cAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGccc < 1:3376952/139‑1 (MQ=33) | TTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCC‑TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCC > CP009273/359971‑360241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |