| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009273 | 2,400,028 | Δ9 bp | coding (85‑93/939 nt) | lrhA ← | transcriptional repressor of flagellar, motility and chemotaxis genes |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009273 | 2400028 | 2400036 | 9 | 94 [0] | [0] 95 | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2400027 | 0 (0.000) | 89 (1.370) | 54/214 | 0.1 | 100% | coding (94/939 nt) | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes |
| ? | CP009273 | 2400037 = | 0 (0.000) | coding (84/939 nt) | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes | |||||
TTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAA > CP009273/2399902‑2400175 | accaagacgttgaatgccatgttcagttaacagtttgttgcgaccgtgacgagcgaacagatctttcccaacgagttgttccagactctgcatttgctgacttacggcggactgagtacgaaacacagcggccgcaaaa > 1:2858393‑M2/136‑139 (MQ=255)accaagaagttgaatgccatgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggcctgagtacgacacacagcggcagcaaaa < 1:4144185‑M2/4‑1 (MQ=255)accaagaagttgaatgccatgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcaaaa > 1:306724‑M2/136‑139 (MQ=255)accaagaagttgaatgccatgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcaaaa > 1:980120‑M2/136‑139 (MQ=255)accaagaagttgaatgccatgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcaaaa < 1:3353265‑M2/4‑1 (MQ=255)accaagaagttgaatgccatgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcaaaa > 1:605213‑M2/136‑139 (MQ=255)accaagaagttgaatgccatgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcaaaa < 1:1651910‑M2/4‑1 (MQ=255) tgaatgccatgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGa > 1:1099856‑M2/126‑138 (MQ=255) gaatgccatgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgaggacgacacacagcggcagcAAAAGTGGTCAGATc > 1:2410607‑M2/125‑139 (MQ=255) atgccatgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacaacggcagcAAAAGGGTTCAGAtcc > 1:4295845‑M2/123‑137 (MQ=255) ccatgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgca > 1:3807359‑M2/120‑138 (MQ=255) catgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacgcagcggcaacAAAAGTGTGCAGATCGgcaac < 1:4126629‑M2/21‑1 (MQ=255) catgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaac < 1:2777645‑M2/21‑1 (MQ=255) catgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaac < 1:1024498‑M2/21‑1 (MQ=255) gttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagc < 1:3722830‑M2/24‑1 (MQ=255) agttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAg < 1:3485826‑M2/12‑1 (MQ=255) gttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGcaacaa > 1:2139298‑M2/111‑139 (MQ=255) ttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACaaa > 1:1221023‑M2/110‑139 (MQ=255) tttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggccgcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTtctc > 1:4033541‑M2/103‑139 (MQ=255) ttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaaca > 1:1314564‑M2/102‑123 (MQ=255) ttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGtt < 1:1573300‑M2/34‑1 (MQ=255) ttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGtt < 1:851343‑M2/34‑1 (MQ=255) tgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcaaaa > 1:614806‑M2/101‑104 (MQ=255) tgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTcag < 1:3151988‑M2/39‑1 (MQ=255) gttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcaa < 1:3153003‑M2/2‑1 (MQ=255) gaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgcttacttacggcgtactgagtacgacacacagcggcagcAAAAGTGTTCCGACCGGCAACAGCAACAAATGTTCTCAGCAGAt < 1:847603‑M2/44‑1 (MQ=255) accgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcg > 1:372800‑M2/94‑139 (MQ=255) tgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAg > 1:981136‑M2/90‑101 (MQ=255) acgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtcg > 1:1035045‑M2/88‑139 (MQ=255) acgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtcg > 1:581973‑M2/88‑139 (MQ=255) cgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtcg < 1:4308876‑M2/52‑1 (MQ=255) acagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGGGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGGCGAGGTTAAt > 1:3584021‑M2/80‑139 (MQ=255) ctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCgg < 1:3275491‑M2/66‑1 (MQ=255) caacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGAtt > 1:1821794‑M2/68‑139 (MQ=255) acgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGtt > 1:2479136‑M2/66‑74 (MQ=255) cgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGc < 1:3308365‑M2/75‑1 (MQ=255) gagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCa < 1:1636733‑M2/76‑1 (MQ=255) gagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCa < 1:110188‑M2/76‑1 (MQ=255) gagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCa < 1:2754452‑M2/76‑1 (MQ=255) gagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCa < 1:3206830‑M2/76‑1 (MQ=255) gttgttccagacgctgcatttgctgacttacggcggactgagtccgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCAc < 1:3853113‑M2/77‑1 (MQ=255) gttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCAc < 1:2545559‑M2/77‑1 (MQ=255) gttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCAc < 1:4144562‑M2/77‑1 (MQ=255) gttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCAc < 1:2296277‑M2/77‑1 (MQ=255) gttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGAGCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCAc < 1:2479603‑M2/77‑1 (MQ=255) tgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACtt < 1:1555183‑M2/79‑1 (MQ=255) tgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTa < 1:237635‑M2/80‑1 (MQ=255) gttctatacgctgcatttgctgacttaaggcggactgagtacgacacacagcggcagcATAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGGTCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTAt < 1:2705008‑M2/81‑1 (MQ=255) ttccagacgctgcatttgctgacttacggcggactgagttcgacacacagcggcagcaa < 1:1751948‑M2/2‑1 (MQ=255) ttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtc < 1:1306182‑M2/51‑1 (MQ=255) ttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCgg < 1:444887‑M2/66‑1 (MQ=255) ttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCAc < 1:2653980‑M2/77‑1 (MQ=255) ttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTa < 1:2094361‑M2/80‑1 (MQ=255) tccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCa < 1:3127191‑M2/83‑1 (MQ=255) tccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCa < 1:656971‑M2/83‑1 (MQ=255) gctgcatttgctgacttacggcggactgagtacgacacacagcggcagcaaa < 1:2844885‑M2/3‑1 (MQ=255) gctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGcaacaa < 1:3605830‑M2/29‑1 (MQ=255) tgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTc < 1:1503361‑M2/10‑1 (MQ=255) tgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAAtt > 1:3477453‑M2/48‑108 (MQ=255) tgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCa > 1:2617542‑M2/48‑123 (MQ=255) tgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCatata > 1:481358‑M2/48‑134 (MQ=255) tgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATAtatta > 1:4264015‑M2/48‑137 (MQ=255) tgcatttgctgacttacggcggactgagtacgacacacaccggccgcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGGTCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATc > 1:4146343‑M2/48‑139 (MQ=255) ttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtc < 1:4221533‑M2/51‑1 (MQ=255) ctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGa > 1:672566‑M2/40‑52 (MQ=255) ctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTcag > 1:1434797‑M2/40‑78 (MQ=255) tgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTg < 1:3392448‑M2/100‑1 (MQ=255) tgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTg < 1:3185739‑M2/100‑1 (MQ=255) gacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaa > 1:3674232‑M2/38‑57 (MQ=255) gacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTggc < 1:988832‑M2/102‑1 (MQ=255) cttacggcggactgagtacgacacacagcggcagcAAAAGTGTTGAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGAATTGCACTTATCATATATTATCACTTACTggcg > 1:4184070‑M2/36‑138 (MQ=255) ttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTggcg > 1:460038‑M2/35‑137 (MQ=255) acggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAAtt > 1:2051805‑M2/33‑93 (MQ=255) cggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCa < 1:578305‑M2/76‑1 (MQ=255) cggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATa < 1:2126255‑M2/110‑1 (MQ=255) gactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTg > 1:2720247‑M2/27‑139 (MQ=255) ctgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAg < 1:547700‑M2/115‑1 (MQ=255) ctgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAg < 1:1863384‑M2/115‑1 (MQ=255) agtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagc < 1:3686117‑M2/24‑1 (MQ=255) agtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCatat > 1:2750789‑M2/22‑107 (MQ=255) tacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGt > 1:1473061‑M2/20‑139 (MQ=255) acgacacacagcggcagcCAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGt < 1:3962507‑M2/120‑1 (MQ=255) acgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGAAGATCGAGGTCGAGGTTACTTCTCGGACGACTTTCACGTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGt < 1:1908270‑M2/120‑1 (MQ=255) cacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCCCATACTGAGCTGGTTAAt > 1:4257343‑M2/15‑138 (MQ=255) acacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGc < 1:3643998‑M2/126‑1 (MQ=255) acagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGtt > 1:1515275‑M2/12‑45 (MQ=255) acagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAAt > 1:655712‑M2/12‑135 (MQ=255) acagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAAt > 1:929324‑M2/12‑135 (MQ=255) acagcggcagcAAAAGTGTTAAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAAt > 1:1805820‑M2/12‑135 (MQ=255) cggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGc > 1:2325128‑M2/8‑138 (MQ=255) ggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTTTCATATATTACCACCTAATGGCCGCACATACTAAGGTGGTTAACGCCGTGcac < 1:3973061‑M2/133‑1 (MQ=255) ggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCtgtg < 1:3101265‑M2/130‑1 (MQ=255) agcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTg < 1:308181‑M2/74‑1 (MQ=255) cAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGcacacaca > 1:1802805‑M2/2‑139 (MQ=255) aaaaGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACacaa < 1:2828052/139‑1 (MQ=255) | TTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAA > CP009273/2399902‑2400175 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |