| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,999,331 | 0 | A | T | 21.3% | 169.4 / 17.9 | 76 | intergenic (‑186/‑290) | ygeV/ygeW | putative sigma‑54‑interacting transcriptional activator/putative carbamoyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (17/42); new base T (16/0); total (34/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.36e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TGGTTCACAGATCATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCGTATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCA > CP009273/2999194‑2999463 | tGGTTCACAGATCATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTa < 1:2527428/138‑1 (MQ=255) tCACAGATCATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCaaa < 1:2008682/139‑1 (MQ=255) cacaGATCATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGGTTTTTAAAc > 1:2537309/1‑139 (MQ=255) gATCATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGGGGTTTTCAAAATgga > 1:4075558/1‑137 (MQ=255) tCATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGaa < 1:3036140/137‑1 (MQ=255) tCATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGaa < 1:1185362/137‑1 (MQ=255) cATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGGGTTTATCAAAATGAagag > 1:666361/1‑139 (MQ=255) cATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAAATGAagag > 1:2048560/1‑139 (MQ=255) atgatATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCaaa < 1:101750/127‑1 (MQ=255) gatATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGaa < 1:2049658/130‑1 (MQ=255) tatTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGGGGTTTTTAAAATGaagaaagaaaa > 1:3369357/1‑134 (MQ=255) tatTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATc < 1:3761029/120‑1 (MQ=255) tatTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATTAAACTGAAgagagagatc > 1:565652/1‑134 (MQ=255) atTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGaa < 1:2858597/127‑1 (MQ=255) atTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCt < 1:1091047/139‑1 (MQ=255) atTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCt < 1:2990724/139‑1 (MQ=255) ttAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCt > 1:1736793/1‑138 (MQ=255) tAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGc < 1:674705/139‑1 (MQ=255) tCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCt < 1:364541/139‑1 (MQ=255) cAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGGGTATTAAACTGAAGAGAGAAAGACTGCCCCtt > 1:4028071/1‑139 (MQ=255) ggCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTTTTAAAATTAAGAGAGATATCCTTCCCCtttt > 1:2334457/1‑138 (MQ=255) ggCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTTTCAAACTGAaga > 1:1590315/1‑120 (MQ=255) gCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTa > 1:818615/1‑138 (MQ=255) gAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCt < 1:1843705/139‑1 (MQ=255) aaTTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCtt < 1:1761879/138‑1 (MQ=255) aaTTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCtt < 1:1167106/138‑1 (MQ=255) aTTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGTCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTAt < 1:4300975/139‑1 (MQ=255) aTTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGGTTTTTAAACTGAAGAGAGAAAGCCTGCCCCTTTTTCTTAt > 1:664196/1‑139 (MQ=255) gCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCtt < 1:608078/133‑1 (MQ=255) cTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTTTTCAACTGAAGAGAGATAGCCTGCCCCCTTATCTTATTTTTg > 1:1851119/1‑139 (MQ=255) tttGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTg < 1:1259520/138‑1 (MQ=255) tttGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGa < 1:3023391/139‑1 (MQ=255) gATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGGGTTTATTAAACATAAGAGAGATAGACCGCCCCTTTATCTTAttttttta > 1:3300521/1‑132 (MQ=255) gATAAAAACATAAGATTTTTATCATTTTCCAATGAAATTATGGAAGAGATATCCCATTTCTATATCAATATGAGAATTACGGCGGTGAATTTGTCTAAATTCAAAAAGATAACCTGTTCCTTTTTTTTCATTTTGATaa > 1:3778725/1‑138 (MQ=255) aaaCATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGGGTTTTTTAAACATCAAAGAGAGATGCCGCCCCCTTTTCTTTTTTTTGTTAcacg > 1:2780506/1‑134 (MQ=255) aaaCATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTagc < 1:161370/139‑1 (MQ=255) tAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCATTATCTTATTTCTGATACTTAGCAGCaa < 1:3499650/139‑1 (MQ=255) ttttATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTagc < 1:2438559/128‑1 (MQ=255) ttCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGGGGTTATTAAACTGAAGAGAGATAGACTGCCCCTTTATCTTATTTTTGATACTTAGCAGCAAATAAATAAAGCGAGaa > 1:2595158/1‑139 (MQ=255) ttCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGGGGGATTTTCAAACTGAAGAGAAATAGCCGGCCCCCTTATCTTATTTTTGCAACTTAACAGCaaaaaaa > 1:265628/1‑128 (MQ=255) aTTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAATAAcg < 1:2465760/123‑1 (MQ=255) aaGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTACTTCTGATACTTAGCAGCAAATAAATAACGCGATaaaaaa < 1:4326326/126‑1 (MQ=255) agagATATCACATTTCTATATCAATATGAGAATTACGGCGGTGGGGTTTTCAAAATGAAAAAAGAAATACCGCCCCTTTATCTTATTTTTGATAATTAGCAGCAAAAAAATAACGCGAAAAAAAAAAACAAAAGttt > 1:3622947/1‑137 (MQ=255) agaTATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGaa < 1:467018/57‑1 (MQ=255) gaTATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTg < 1:4014177/88‑1 (MQ=255) gaTATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTg < 1:2901862/88‑1 (MQ=255) atatCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAg < 1:2929465/64‑1 (MQ=255) acaTTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCGTATTTTac < 1:1197888/139‑1 (MQ=255) caTTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCGTATTTTaca < 1:1857907/139‑1 (MQ=255) ttCTATATCAATATGAGAATTACGGCGGTGAGTTTTTCAAACTGAAGAGAAATAGCCTGCCCCCTTATCTTATTTTTGATACTTtgca > 1:729635/1‑88 (MQ=255) ttCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCt < 1:2957525/58‑1 (MQ=255) ttCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCt < 1:976292/58‑1 (MQ=255) tCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAgcagca < 1:583714/90‑1 (MQ=255) tCTATATCAATATGAGAATTACGGCGGTGAGGTTATCAAACTGAAGAGAGATAGCCTGCCCCtt > 1:757287/1‑64 (MQ=255) tCTATATCAATATGAGAATTACGGCGGAGAGTTTAACAAAATGAAGAGAGAAAGCAACCCCCTTTATATTATTTTTTATAAGTAGCAGGAAATAAAAAAAGCGATAAAAAAAACCAAAAGGTTTCGGATTTTaaaaaaa > 1:236740/1‑137 (MQ=255) atatCAATATGAGAATTACGGCGGTGAGTTTATTAAACTTAAGAGAGATAGCCTGCCCCTTTATCTTATTTTTTATAATTTACAGCAAATAAAAAAAGCGATAAAAAAAAACAAACGTTTTTGTATTTTTCAAACAAcc > 1:321547/1‑139 (MQ=255) tatCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCt < 1:4175563/59‑1 (MQ=255) tatCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTTTCTTATTTTTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAACCAAACGTTTTCGTATTTTACAaacaaaca > 1:942991/1‑139 (MQ=255) tatCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCGTATTTTACAAACAAcc < 1:2331874/138‑1 (MQ=255) tatCAATATGAGAATTACGGCGGTGAGGTTTTTAAACTTAAGAGAGATAACCTGCCCCTTTATTTTTTTTCTTATAATTTGCAGCCAATAAATAAAGCGATAAAAAAAACCCAACGTTTTTGTATTTTACAAAAAAACa > 1:3893431/1‑139 (MQ=255) cAATATGAGAATTACGGCGGTGAGTTTATTAAACTGGAGAGAGATAGCCTGCCCCCTTATCTTTTTTCTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAGGCAAACGTTTTTGTATTTTACAAACAACCAGaa > 1:190922/1‑139 (MQ=255) atatGAGAATTACGGCGGTGAGTTTATCAAACTTAAGAGAGATAACCTGCCCCCTTATCTTTTTTCTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAACCAAACGTTTTTGTATTTTACAAACAACCAGaa > 1:1752622/1‑137 (MQ=255) atatGAGAATTACGGCGGTGAGTTTATCAAAATTAAAAGAGATAGCCCGCCCCTTTAt > 1:785377/1‑58 (MQ=255) tatGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCt < 1:1364432/47‑1 (MQ=255) tatGAGAATTACGGCGGTGAGGTTATCAAACTGAAGAGGGATAGGATGCCCCTTTTTCTTCTTTCTGATAATTAGCAGCAAATAAATAAAACGATAAAAAAAGCCAAACGTTTTCGTATTTTACAAACAACAAGaa > 1:2124287/1‑136 (MQ=255) agaATTACGGCGGTGAGTTTTTCAAAATGGAAAGAGATATCCTGCCCCCTTTTCTTATTTTTTATACTTTGTAACAAAAAAATAACGCGCTAAAAAAAGCCCAACGTTTTTGTATTTTACAAAAAACCAGAAGCTGGCa > 1:165164/1‑139 (MQ=255) agaATTACGGCGGTGAGTTTTTCAAAATGAAGAGAGATAGCCTGCCCCCTTATCTTATTTCTGATACCTAGCAGCAAAAAAATAACCCGATAAAAAAAGCCAAACGGTTTCGTTTTTTACAAAAAACCAGAAGCTGGCa > 1:45929/1‑139 (MQ=255) agaATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTTTTTTTTATACTTAGCAGCAAATAAAAAACGCGATAAAAAAAACCCAACGTTTTTGTATTTTACAAAAAAACAGAAACTGGc > 1:158780/1‑138 (MQ=255) gaATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCGTATTTTACAAACAACCAGAAGCTGGCa < 1:3100786/138‑1 (MQ=255) aTTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCGTATTTTACAAACAACCAGAAGCTGGCATc < 1:3243885/138‑1 (MQ=255) aCGGCGGTGAGTTTTTTAAACTTAAGAGAGAAAACCTGCCCCTTTATCTTTTTTCTTATACTTTGCAGCAAATAAATAACGCGATAAAAAAAACCAAACGTTTTCGTTTTTTTTAAACAACCAAAAGCTTGCATCAAtt > 1:2388147/1‑139 (MQ=255) cggcggTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCGTATTTTACAAACAACCAGAAGCTGGCATCAAttt < 1:1723036/139‑1 (MQ=255) cggTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCGTATTTTACAAACAACCAGAAGCTGGCATc < 1:470581/131‑1 (MQ=255) gTGAGGTTTTTAAACCGGAGAGAGATAACCTGCCCCTTTATCTTATTTTTTTTAATTAGCAGCAAATAAAAAACGCGATAAAAAAAACCAAAAGCTTTCGTATTTTTCAAAAAAACAGAAGATAGCATAAAATtgtggt > 1:2712038/1‑137 (MQ=255) gAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCGTATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATc < 1:4021295/138‑1 (MQ=255) gAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCGTATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCa < 1:1905514/139‑1 (MQ=255) aGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCGTATTTTacaa < 1:2491081/107‑1 (MQ=255) aTCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCGTATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGAt > 1:2643216/1‑131 (MQ=255) | TGGTTCACAGATCATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGGTGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGCAGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCGTATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCA > CP009273/2999194‑2999463 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |