Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	3,406,257	0	C	T	24.0%	147.9 / 21.2	75	A190T (GCC→ACC)	acrS	acrAB operon transcriptional repressor
Reads supporting (aligned to +/- strand):  ref base C (43/14);  new base T (1/17);  total (44/31)
Fisher's exact test for biased strand distribution p-value = 1.24e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01
Rejected as consensus: Frequency below/above cutoff threshold.

GTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGACACGCCT  >  CP009273/3406121‑3406391                                                                                                                                          |                                                                                                                                       gTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCtt                                                                                                                                      >  1:21100/1‑139 (MQ=255) gTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCtt                                                                                                                                      >  1:4137742/1‑139 (MQ=255) gTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCtt                                                                                                                                      >  1:1568288/1‑139 (MQ=255) gTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCtt                                                                                                                                      >  1:1572876/1‑139 (MQ=255) gTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTAATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATAGACCAGAGCGGGGGCtt                                                                                                                                      >  1:1707525/1‑139 (MQ=255) gTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATAACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCtt                                                                                                                                      >  1:3148079/1‑139 (MQ=255)  ttAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTg                                                                                                                                     >  1:46190/1‑139 (MQ=255)  ttAACTGTGACCAACTGAATTTTCAGGTAAGAAATTGAATTTACATGACACTTAATTCATTCGTTTGATTAATTAATTTCGTTTTGTTTTCATCTGGC‑ATGAACATTCTTAATACTTTATCGCCCAGAGCGGGGGCtt                                                                                                                                      <  1:976204/138‑1 (MQ=255)        gtgACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTtata                                                                                                                               <  1:4098273/139‑1 (MQ=255)          gACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATCCGTTATCGACCAGAGCGGGGGCTTGTTTATaa                                                                                                                              <  1:3877965/138‑1 (MQ=255)             gAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGAt                                                                                                                          <  1:3076806/139‑1 (MQ=255)                cTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCAt                                                                                                                       >  1:607191/1‑139 (MQ=255)                   aaTTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATaa                                                                                                                     >  1:12617/1‑138 (MQ=255)                       ttCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTGTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCt                                                                                                                                       <  1:984884/116‑1 (MQ=255)                           ggACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCata                                                                                                            >  1:1259265/1‑139 (MQ=255)                                 aaTGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATaaa                                                                                                                             >  1:3156747/1‑116 (MQ=255)                                    gtgATTTTACATGACATTTAATTCTTTCTTGTGATAAATTATTTTGTTTAGTTTTTCATCTGAA‑ATAAACATTATAAATACGTTATCGACCAGAGAGGGGGCTTGTTTATAAAGATAATAACCCGCCATATTCATTAAc                                                                                                   <  1:276767/139‑1 (MQ=255)                                    gtgAATTTACATGACATTTAATTCATTCGTTTGATGAATAAATTTCTTTATTTTTTCATCTGGC‑ATGAACATTCTTAATACGTTACCGCCCAGGGGGGGGGCTTGTTTAAAAAGATCATAACCCGCCATATTCATTAAc                                                                                                   <  1:1967872/139‑1 (MQ=255)                                         tttACATGACATTTAATTCATTCTTTTGATGAATTAATTTCGTTTTGTTTTCATCTGGT‑ATGAACATTCTTAATACGTTATCGCCCAGAGCGGGGGCTTTTTTATAAAGATCATAACCCGCCATATTCATTAACCAGtt                                                                                              <  1:1780762/139‑1 (MQ=255)                                                 gctcTTAATCCATTCGTTTAATTAATTATTTTTTTTTGTTTTTTACTTGGC‑ATAAACACTCTTAAATCTTTATCCACCAGAGGGGGTGTTTTTTTAAAAATTTAATAACCCGCCATATTCATTAACCATTTTTGAACaa                                                                                      <  1:1731966/136‑1 (MQ=255)                                                 acacTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTtata                                                                                                                               >  1:2972712/1‑98 (MQ=255)                                                 acacTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACaa                                                                                      >  1:373793/1‑139 (MQ=255)                                                   atttAATTCTTTGATTTGAGAAATAATTTTTGTTTTGTTTTCATCGGAC‑TAAAACATTTTAAATTCTTTCTCACCAAGCGGGGGGGTTTGTTAATAAATCCCATAACCCGCCATATTCATTAACCAGTTTTGAACAAtt                                                                                    <  1:3806250/137‑1 (MQ=255)                                                    cTTAATTAATTCTTTTGATGAATTAATTTCGTTATGTTTTCATCGGGC‑ATAAACATTCTTAATCCTTTACCGACAAGAGCGGGGGTTTGTTTAAAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGaa                                                                                         <  1:1505964/133‑1 (MQ=255)                                                          tcattcGTTAAATAATTTATTTTGTTTTTTTTTTCATCTGGT‑TTAAAATTTCTTAATACCTTAAAGCCCAGAGCGGGGTTTTTTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGa                                                                             <  1:3980760/139‑1 (MQ=255)                                                            attcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAg                                                                           >  1:1635619/1‑139 (MQ=255)                                                             ttcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAGCATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAg                                                                           >  1:3420329/1‑138 (MQ=255)                                                             ttcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAg                                                                           >  1:2255548/1‑138 (MQ=255)                                                             ttcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAg                                                                           >  1:2495725/1‑138 (MQ=255)                                                             ttcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAg                                                                           >  1:1820971/1‑138 (MQ=255)                                                              tcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCt                                                                               >  1:3676829/1‑133 (MQ=255)                                                                 ttttATGATTTAATTTCGTTTTTTTTTAAT‑TGGCAAACAACATTCTTACTCCGTAAGCACCCAGGGCGGGTGTTTGTTAAAAAAGCCAATATCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCAcc                                                                      <  1:2546549/139‑1 (MQ=255)                                                                 tttGATAAATTATTTTCTTTTTTTTTTCATCTGGA‑AAGAACTTTTTAAAACCGTTACCGACGAGGGGGGGGGTTTGTTTAAAAAGACCAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCAcc                                                                      <  1:3991209/139‑1 (MQ=255)                                                                 tttAATGAATTAATTTCTTTATGTTTTCATCTGGC‑ATAAACATTCTTAATCCGTTATCGACCAGAGCGGGGGTTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCAcc                                                                      <  1:82351/139‑1 (MQ=255)                                                                   ttatgaATTATTTTCTTTATTTTTTCATCTGCC‑ATAATCTTTTTTAATCCTTTTTCCCCCAGCGCGGGGGTTTTTTTAAAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCAt                                                                    <  1:9621/137‑1 (MQ=255)                                                                   tgatgaATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTACAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCa                                                                     >  1:1549915/1‑138 (MQ=255)                                                                      ataattaattTCGTTATTTTTTCATCTGTC‑TGAAACATTCTAAATACTTCACAGCCCAGGGGGGGGTTTTTTTTACAAAGATCAAAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaa                                                                 <  1:3720688/137‑1 (MQ=255)                                                                        aattatttTCGTTATTTTTTCATCTGGC‑ATGAAAATTTTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTAAAAAGATCAAAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCAt                                                                    <  1:1479234/134‑1 (MQ=255)                                                                               ttCGTTATGTTGTCATCTGGC‑ATGAACATTCTGAATACGGTATCTACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACAAGGTTTGAACAATTCCGCTGAAGGCACCATCAATAATAatca                                                        >  1:4085198/1‑139 (MQ=255)                                                                                tctttATTTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGCCCAGAGCGGGGGCTTTTTTAAAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAatcat                                                       <  1:322871/136‑1 (MQ=255)                                                                                  gTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaataataat                                                          >  1:3650157/1‑134 (MQ=255)                                                                                    tATTTTTTCTTCTGCA‑ATAAAAATTCTAAATCCGTTAGCACCCAGGGGGGGGGTTTTTTTAAAAAGCACACAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATcac                                                    <  1:3290498/138‑1 (MQ=255)                                                                                        ttttCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACACGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCacaa                                                  <  1:2434054/136‑1 (MQ=255)                                                                                        ttttCATCGGGC‑ATGAACATTCTTAATCCGTTATCGACCGGAGCGGGGGCTTTTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCa                                                                        <  1:1529803/114‑1 (MQ=255)                                                                                           tCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTa                                            >  1:2919802/1‑139 (MQ=255)                                                                                                tGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTtata                                                                                                                               >  1:4040896/1‑51 (MQ=255)                                                                                                gggC‑AGGAACATTCTTAAAACGTTATCGACAAGGGGGGGGGTTTGTTTATAAAAATAATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCg                                       <  1:1248954/138‑1 (MQ=255)                                                                                                  gC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaataa                                                              >  1:3700613/1‑114 (MQ=255)                                                                                                  gC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACACGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATc                                        >  1:261119/1‑136 (MQ=255)                                                                                                        aaCATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaataata                                                            >  1:1863334/1‑111 (MQ=255)                                                                                                             tCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCt                           >  1:2354959/1‑139 (MQ=255)                                                                                                              cTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCt                           >  1:1646439/1‑138 (MQ=255)                                                                                                               ttAATATGTTATCGCCCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaata                                                               <  1:609499/101‑1 (MQ=255)                                                                                                               ttAATACTTTATCGACCAGAGCGGGGGTTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATcac                                                    <  1:809336/112‑1 (MQ=255)                                                                                                               ttAATACGTTATCGACCAGAGCGGGGGTTTGTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATcac                                                    <  1:2045815/112‑1 (MQ=255)                                                                                                                 aaTACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATAACAACATCTaaa                                          >  1:2627731/1‑120 (MQ=255)                                                                                                                  aTACGTTATCGACCAGGGGGGGGGTTTTTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATcac                                                    <  1:1756524/109‑1 (MQ=255)                                                                                                                     cGTTACCGACCAGGGCGGGGGTTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAAcc                   <  1:629694/139‑1 (MQ=255)                                                                                                                       ttATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCtt                 >  1:581209/1‑139 (MQ=255)                                                                                                                       ttATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATCAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTAATTTGCTACACAACCtt                 >  1:101181/1‑139 (MQ=255)                                                                                                                       ttAGCGAACAGAGCGGGGGCTAGTTTATAAAGATCATAACCCGCCATATTCATTAACAAGTTTTGAACAATTCAGCTGAAGGCACCATCAATAATAATCATCACAAAATCTAAATCGAGGTTATTTGCTACACAAACtt                 >  1:3570085/1‑139 (MQ=255)                                                                                                                         atggaacAGAGCGGAGGTTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGAACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACAttgt               >  1:3177338/7‑139 (MQ=255)                                                                                                                         aTCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAAtcatca                                                     >  1:2781926/1‑101 (MQ=255)                                                                                                                         aTCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTaaa                                          >  1:4215557/1‑112 (MQ=255)                                                                                                                         aTCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTaaa                                          >  1:2981449/1‑112 (MQ=255)                                                                                                                         aTCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCttgt               >  1:2802082/1‑139 (MQ=255)                                                                                                                            gACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTaaa                                          >  1:3926852/1‑109 (MQ=255)                                                                                                                               cAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAatcatc                                                      >  1:634933/1‑94 (MQ=255)                                                                                                                               cAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTg          >  1:2515639/1‑138 (MQ=255)                                                                                                                                  ttcGGGGGCGTGTTAAAAAAACTCATCACCCCCCCTTTTCATTAACCAGTTTTGAACAATTCCGCCGAAGGCTCCATCAATAATAATCCTCCCAACTACTAAATCGAAGTTATTTCCTTCACAACCTTGTTGCTGacac      <  1:1005510/137‑1 (MQ=255)                                                                                                                                  agCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGacac      >  1:1650199/1‑139 (MQ=255)                                                                                                                                   gggggggTTTTTTTAAAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGacac      <  1:747613/136‑1 (MQ=255)                                                                                                                                   gCGGGGGTTTGTTTAAAAAGATAATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGacac      <  1:342825/138‑1 (MQ=255)                                                                                                                                       gggCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACaa                     >  1:1452481/1‑119 (MQ=255)                                                                                                                                       gggCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGACACGCCt  >  1:3887332/1‑138 (MQ=255)                                                                                                                                          |                                                                                                                                       GTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGC‑ATGAACATTCTTAATACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGACACGCCT  >  CP009273/3406121‑3406391

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑