Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	2,380,362	0	C	T	29.2%	110.8 / 26.2	65	intergenic (+52/‑51)	yfbL/yfbM	putative peptidase/DUF1877 family protein
Reads supporting (aligned to +/- strand):  ref base C (4/42);  new base T (19/0);  total (23/42)
Fisher's exact test for biased strand distribution p-value = 7.19e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATA  >  CP009273/2380230‑2380500                                                                                                                                      |                                                                                                                                              gATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCAt                                                                                                                                         <  1:97560/139‑1 (MQ=255) gATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCAt                                                                                                                                         <  1:2652983/139‑1 (MQ=255) gATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCAt                                                                                                                                         <  1:71423/139‑1 (MQ=255) gATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCAt                                                                                                                                         <  1:2178988/139‑1 (MQ=255) gATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCAt                                                                                                                                         <  1:776520/139‑1 (MQ=255)                         cAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCAGAAAAAAAGA‑ACAGCCCAATTTTTTTTCTCTCCTCTG‑TTTTTAAATGCGGAAAATG‑aa                                                                                                               >  1:2432442/1‑139 (MQ=255)                                   cTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCGCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACgg                                                                                                      <  1:2529867/138‑1 (MQ=255)                                   cTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAACGA‑CATGCACATTTTATTTTTCCTCATCTG‑TTTTTAAATGCGGAACATG‑AAATTCAAAgga                                                                                                     >  1:1332386/1‑139 (MQ=255)                                   cTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCCGAAAAAAAGA‑CAAGCACATTTTATTTTTCCTCATCTG‑TTTTTAGATGCGAAAAAAG‑AAATTTAACggg                                                                                                     >  1:2621834/1‑138 (MQ=255)                                     cAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACgga‑gg                                                                                                  <  1:17729/139‑1 (MQ=255)                                          aGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGaaaa                                                                                              <  1:117431/138‑1 (MQ=255)                                            tGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAACGA‑CAAGCACATTTTATTTTTCCTCATCTG‑TTTTAAGATGCGAAAAATG‑AAATTCAAAAGG‑GGAAaaata                                                                                           >  1:1674743/1‑139 (MQ=255)                                             ggATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAaaataa                                                                                          <  1:1198664/139‑1 (MQ=255)                                               aTGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAaaataaa                                                                                         <  1:1335301/138‑1 (MQ=255)                                                tGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAaaataaat                                                                                        <  1:383626/138‑1 (MQ=255)                                                   tgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCg                                                                                                                         <  1:697280/104‑1 (MQ=255)                                                   tgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGa                                                                                                                        <  1:1697793/105‑1 (MQ=255)                                                   tgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACgga‑gg                                                                                                  <  1:513399/125‑1 (MQ=255)                                                   tgtTATAACTTCGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCAt                                                                                                                                         <  1:2748615/89‑1 (MQ=255)                                                      tataACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCGAAAAAAAGA‑CATATACACATTTTTTTTCCCCCTCTG‑TTTTTAGATGCGAAAAAAGAAAATTAAAGGGG‑GGAAAAAAAATTGGGagg                                                                                  >  1:1807933/1‑137 (MQ=255)                                                       ataACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGTTCCAGAAAAAAAGACCATG‑AAATTTTTTTTTTTCTCATCTT‑TTTTATGATGCGAAAAAAG‑AAAATTAACGTG‑GGAAAAAAAAAAGGGGATGa                                                                                >  1:1973050/1‑139 (MQ=255)                                                        taACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGAt                                                                               <  1:2148268/139‑1 (MQ=255)                                                         aaCTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCAt                                                                                                                                         <  1:86392/83‑1 (MQ=255)                                                             ttGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCGAAAAAAAGA‑CAAGCACATTTTATTTTTCCTCATCTG‑TTTTTAGATGCGGAAAAAG‑AAAATCAAAGGG‑GGGAAAAAAAATTGGAATGATTGGCt                                                                          >  1:2526749/1‑139 (MQ=255)                                                             ttGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAACGA‑CAAGCACATTTTTTTTTTCCTCATCTG‑TTTTTAGATGCGAAACATG‑AAAATCAACGGG‑GGAAAAATAAATGGGGATGATTGGCt                                                                          >  1:724288/1‑139 (MQ=255)                                                             ttGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAAAGA‑CAAGCACAATTTTTTTTTCCTCATCTG‑TTTTTAAATGCGGAAAATG‑AAAATTTAAGGG‑GGAAAAATAAATGGGGATGAtttggt                                                                          >  1:891224/1‑135 (MQ=255)                                                              tGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACg                                                                                                       <  1:1829589/110‑1 (MQ=255)                                                               gTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCCGAAAAAACGG‑AAAGCACATTTTTTTTTTCCTCATCTG‑TTTTTAGATGCGGAAAAAG‑AAAATTAAAGGA‑GGAAAAATAAATGGGGATGATTTGGTAt                                                                        >  1:508288/1‑139 (MQ=255)                                                                ttATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCAt                                                                                                                                         <  1:2531811/76‑1 (MQ=255)                                                                ttATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACa                                                                                                                    <  1:5154/96‑1 (MQ=255)                                                                     caacaGTAAATAATAAAAATTTCTCGAGGCGGGTGCCGAAAAAACGG‑CAAGCACATTTTATTTTTCCTCCTCTG‑TTTTAAGAAGGGAAAAATG‑AAATTCAACGGA‑GGAAAAATAAAAGGGGATGATTGGCTATTTTTCa                                                                  >  1:74218/1‑139 (MQ=255)                                                                        caGTAAATAATAAAAATTTCTCGAGGCGGGTTCCGAAAAAACGA‑CATGCACATTTTTTTTTTCCTCCTCTT‑TTTTTAGATGCGGAAAATG‑AAAATCAACGGAGGGAAAAAAAAAGGGGAAT‑ATTTGCTCTTTTTCAGaa                                                               >  1:1108280/1‑139 (MQ=255)                                                                        caGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGaa                                                                                                <  1:613151/106‑1 (MQ=255)                                                                        caGTAAATAATAAAAATTTCCCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCAt                                                                                                                                         <  1:901217/68‑1 (MQ=255)                                                                          gTAAATAATAAAAATTTCTCGAGGCGGGTGGAGAAAAAACGA‑CAATCACAATTTTTTTTTCCTCCCCTGTTTTTAAATTGCGAAA‑ATG‑AAATTTAAAAGA‑GGGAAAAAAAATGGGGATGAATGGGTATTTTTTAGaaaa                                                             >  1:307358/1‑138 (MQ=255)                                                                          gTAAATAATAAAAATTTCTCGAGGCGGGTCCCGGAAAAACAG‑CATGCGCATTTTAGTTTTCCTCCTCTG‑TTTTTTTATGCGAAACATG‑GAATTTaa                                                                                                         >  1:1429876/1‑96 (MQ=255)                                                                          gTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAACGA‑CATGAACATTTTTTTTTTCCTCATTTT‑TTTTAAGATGAGAAAAATT‑AAAATTAAAGGG‑GGGAAAATAAAAGGGAATGATTGGGTCTTTTTCAGAAAt                                                             >  1:962586/1‑139 (MQ=255)                                                                                aataaAAATTTCTCGAGGCGGGGCCAGGAAAAAGGA‑CATAGACATTTTTTTTTTCCTCCTCTG‑TTTTTAGATGCGAAACATG‑AAAATCTAAGGA‑GGAAAAATAAATGGGAATGATTTGCTATTTTTTAGAAAtttagtt                                                       >  1:1635417/1‑134 (MQ=255)                                                                                  taaAAATTTGTCGAGGCGGTTCCAGAAAAAAAGA‑CAAGCACCTTTTATTTTTCCTCATCTG‑TTTTAAGATGCGGAAAAAG‑AAATTCAACGGA‑GGAAAAATAAATTGGGATGGTTGGGTATTTTTCAGAAAATGACTCAg                                                     >  1:1276536/1‑139 (MQ=255)                                                                                  taaAAATTTCTCGAGGCGGGTCCAGAAAAAACGA‑GATGAACATTTTTTTTTTCCTCATCTT‑TTTTTAGATGCGAGACATA‑AAATTCAACCGA‑GGGAAAATAAAATGGAATTATTGTGTCTTTTTCGGGAAATGACTCAg                                                     >  1:2668129/1‑139 (MQ=255)                                                                                  taaAAATTTCTCGAGGCGGGGTCGGGAAAAGCGA‑CGAGTAACTTTTATTTTCTCTCCGCTG‑tttttat                                                                                                                              >  1:2324886/1‑65 (MQ=255)                                                                                  taaAAATTTCTCGAGGCGGGGGAAGAAAAAGAGG‑CAAGCAGCTTTTATTTTTCCTCATCTG‑TTTTAAAATGCGAAAAAGG‑AAATTCAAAGTA‑GGGAAAATAAATAGGAATGATTTGCTATTTTTCAAAAAATggattag                                                     >  1:2496048/1‑133 (MQ=255)                                                                                  taaAAATTTCTCGAGGCGGGGCCAGAAAAAGAGA‑CATGGACATTTTATTTTTCCTCATCTG‑TTTTTAAAAGGGCAAAAAG‑AAAATTAAAAGG‑GGAAAAATAAAAGGGAAAGATTGGGTATTTTTTAGAAAATGACTCAg                                                     >  1:2411687/1‑139 (MQ=255)                                                                                              gAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAAcc                                         <  1:1567335/139‑1 (MQ=255)                                                                                              gAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAAcc                                         <  1:2755330/139‑1 (MQ=255)                                                                                              gAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAAcc                                         <  1:2106100/139‑1 (MQ=255)                                                                                              aaGGCGGTTCAAGAAAAAGCGG‑CATGCACAATTTATTTTCCCTCATCTG‑TTTTAAGATGCGAATCGTG‑AAATTTAACGGA‑GGAAAAATAAATGGGAATGATTGGCTAGTTTGCAGAAATTGAATCAGAAAAGATTAAcc                                         <  1:2073573/138‑1 (MQ=255)                                                                                                 gCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCaa                                       <  1:948910/138‑1 (MQ=255)                                                                                                  cGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCaa                                       <  1:548905/137‑1 (MQ=255)                                                                                                           aaaaaGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGt                             >  1:2372488/1‑138 (MQ=255)                                                                                                            aaaaGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCt                           <  1:1103413/139‑1 (MQ=255)                                                                                                                gCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTg                       >  1:2262340/1‑139 (MQ=255)                                                                                                                            attttattttCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATggg                                                                                     <  1:1710205/66‑1 (MQ=255)                                                                                                                            attttattttCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCtt                                 <  1:2236174/118‑1 (MQ=255)                                                                                                                            attttattttCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTg            <  1:1498834/139‑1 (MQ=255)                                                                                                                            attttattttCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTg            <  1:1932482/139‑1 (MQ=255)                                                                                                                            attttattttCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTg            <  1:2386143/139‑1 (MQ=255)                                                                                                                            attttattttCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTg            <  1:2314910/139‑1 (MQ=255)                                                                                                                            attttattttCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTg            <  1:861436/139‑1 (MQ=255)                                                                                                                            attttattttCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTg            <  1:838578/139‑1 (MQ=255)                                                                                                                              tttattttCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGAt          <  1:789138/139‑1 (MQ=255)                                                                                                                                tattttCCCTCAACTG‑TTTTAAGATGCGAAACATG‑AAAGTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGAt          <  1:1771701/137‑1 (MQ=255)                                                                                                                                 attttCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGa       <  1:210954/139‑1 (MQ=255)                                                                                                                                 attttCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGa       <  1:250333/139‑1 (MQ=255)                                                                                                                                 attttCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGa       <  1:2531610/139‑1 (MQ=255)                                                                                                                                      cccTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGc                                                                           >  1:285831/1‑66 (MQ=255)                                                                                                                                      cccTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAAcc                                         <  1:783823/100‑1 (MQ=255)                                                                                                                                      cccTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTg                       >  1:812370/1‑118 (MQ=255)                                                                                                                                      cccTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGataata  >  1:110073/1‑139 (MQ=255)                                                                                                                                      cccTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGataata  <  1:2699569/139‑1 (MQ=255)                                                                                                                                      cccTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGataata  >  1:2714754/1‑139 (MQ=255)                                                                                                                                      cccTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GAAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAAACAACTGCTTGAGTCTACTGAAAAACCTTTGATGGataata  >  1:1384884/1‑139 (MQ=255)                                                                                                                                      |                                                                                                                                              GATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGA‑CATGCACATTTTATTTTCCCTCATCTG‑TTTTAAGATGCGAAACATG‑AAATTCAACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATA  >  CP009273/2380230‑2380500

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑