New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported = 900NA (NA)10732 (1.110) 123/134 0.2 97.6% intergenic (‑108/‑111) aadA/fdh aminoglycoside adenylyltransferase (Murphy, 1985)/formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag
?Exported 906 = 266 (0.030)intergenic (‑114/‑105) aadA/fdh aminoglycoside adenylyltransferase (Murphy, 1985)/formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag

Only 100 of 11374 total aligned reads displayed.

CTCATGAGCGGATACATATTTGAATGTATTTAGAAAAATAAACAAATCTCGAGACCTATTGACAATTAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTAATAGAAATAA  >  Exported/839‑973
                                                                   |                                                                   
  tgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaaaa                                                                   >  1:955202‑M2/66‑68 (MQ=255)
  tgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaaaa                                                                   >  1:1879994‑M2/66‑68 (MQ=255)
  tgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaaaa                                                                   >  1:2183413‑M2/66‑68 (MQ=255)
  tgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaaaa                                                                   >  1:3939989‑M2/66‑68 (MQ=255)
  tgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaaaa                                                                   >  1:3898137‑M2/66‑68 (MQ=255)
  tgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaaaa                                                                   >  1:3361157‑M2/66‑68 (MQ=255)
    tctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAgg                                                                 <  1:3446810‑M2/5‑1 (MQ=255)
    tctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAgg                                                                 >  1:4722896‑M2/64‑68 (MQ=255)
    tctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAgg                                                                 >  1:1585537‑M2/64‑68 (MQ=255)
    tctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAgg                                                                 <  1:1132620‑M2/5‑1 (MQ=255)
    tctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAgg                                                                 <  1:552995‑M2/5‑1 (MQ=255)
    tctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAgg                                                                 <  1:2398894‑M2/5‑1 (MQ=255)
    tctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAgg                                                                 >  1:1385837‑M2/64‑68 (MQ=255)
    tctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAgg                                                                 >  1:3676658‑M2/64‑68 (MQ=255)
    tctcatgagcggatacatatatgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAgg                                                                 <  1:2896394‑M2/5‑1 (MQ=255)
         tgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTaaa                                                            >  1:4013278‑M2/59‑68 (MQ=255)
            gcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATg                                                         >  1:2522643‑M2/56‑68 (MQ=255)
            gcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATg                                                         >  1:2264723‑M2/56‑68 (MQ=255)
            gcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATg                                                         >  1:777649‑M2/56‑68 (MQ=255)
              ggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCt                                                       <  1:4179816‑M2/15‑1 (MQ=255)
              ggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCt                                                       >  1:2056328‑M2/54‑68 (MQ=255)
              ggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCt                                                       >  1:3068288‑M2/54‑68 (MQ=255)
              ggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCt                                                       <  1:4347422‑M2/15‑1 (MQ=255)
              ggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCt                                                       <  1:1302825‑M2/15‑1 (MQ=255)
              ggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCt                                                       <  1:508129‑M2/15‑1 (MQ=255)
              ggatacatatttgaatgtagttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAatggt                                                       >  1:4639704‑M2/54‑66 (MQ=255)
              ggatacatatatgaatgtttttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCt                                                       <  1:4254660‑M2/15‑1 (MQ=255)
                  acatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATaa                                                   >  1:2714272‑M2/50‑68 (MQ=255)
                   catatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAAt                                                  <  1:2571377‑M2/20‑1 (MQ=255)
                   catatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAAt                                                  <  1:4680782‑M2/20‑1 (MQ=255)
                      atttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTcc                                               >  1:340854‑M2/46‑68 (MQ=255)
                      atttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTcc                                               >  1:732710‑M2/46‑68 (MQ=255)
                      atttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTcc                                               >  1:594525‑M2/46‑68 (MQ=255)
                      atttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTcc                                               >  1:145859‑M2/46‑68 (MQ=255)
                      atttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTcc                                               >  1:16698‑M2/46‑68 (MQ=255)
                       tttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCa                                              >  1:1752703‑M2/45‑68 (MQ=255)
                        ttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCAc                                             <  1:2936019‑M2/25‑1 (MQ=255)
                        ttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCAc                                             <  1:636357‑M2/25‑1 (MQ=255)
                         tgaatgtatttagaaaaattaacaaatctagagacctattgaAAAGGCTAAAATGCTATAATTCCACt                                            >  1:4429590‑M2/43‑68 (MQ=255)
                         tgaatgtatttagaaaaataaacatatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACt                                            >  1:680804‑M2/43‑68 (MQ=255)
                         tgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAATTGCTATAATTCCACt                                            >  1:2757209‑M2/43‑68 (MQ=255)
                         tgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATATTTCCACt                                            >  1:2359133‑M2/43‑68 (MQ=255)
                         tgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCCCt                                            >  1:4300433‑M2/43‑68 (MQ=255)
                         tgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACt                                            >  1:2623113‑M2/43‑68 (MQ=255)
                         tgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACt                                            >  1:1347984‑M2/43‑68 (MQ=255)
                         tgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACt                                            >  1:2224479‑M2/43‑68 (MQ=255)
                           aatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTca                                          <  1:1047590‑M2/28‑1 (MQ=255)
                           aatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTca                                          <  1:1426509‑M2/28‑1 (MQ=255)
                           aatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAAAGCTATAATTCCACTca                                          <  1:3277400‑M2/28‑1 (MQ=255)
                            atgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTcag                                         >  1:4216151‑M2/40‑68 (MQ=255)
                            atgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTcag                                         >  1:2804237‑M2/40‑68 (MQ=255)
                             tgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTcagc                                        >  1:2982684‑M2/39‑68 (MQ=255)
                             tgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTcagc                                        <  1:1836000‑M2/30‑1 (MQ=255)
                             tgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTcagc                                        <  1:1546648‑M2/30‑1 (MQ=255)
                               tatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTcagcag                                      <  1:3855214‑M2/32‑1 (MQ=255)
                                 tttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGa                                    <  1:4762634‑M2/34‑1 (MQ=255)
                                  ttagaaaaataaacaaatctcgagacgaattgaAAAGGCTAAAATGCTATAATTCGACTCAGCAGGAc                                   >  1:3767763‑M2/34‑68 (MQ=255)
                                    agaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGc                                 <  1:3112093‑M2/37‑1 (MQ=255)
                                     gaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCa                                <  1:439013‑M2/38‑1 (MQ=255)
                                       aaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACt                              >  1:2007117‑M2/29‑68 (MQ=255)
                                       aaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACt                              >  1:410245‑M2/29‑68 (MQ=255)
                                       aaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACt                              >  1:3812561‑M2/29‑68 (MQ=255)
                                       aaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACt                              <  1:4557815‑M2/40‑1 (MQ=255)
                                       aaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATGCCACTCAGCAGGACGCACt                              >  1:823603‑M2/29‑68 (MQ=255)
                                       aaaataaacaaatctcgagacctattgaAAAGGCTAAAATGATATAATTCCACTCAGCAGGACGCACt                              >  1:86902‑M2/29‑68 (MQ=255)
                                        aaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTg                             <  1:1089254‑M2/41‑1 (MQ=255)
                                         aataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGa                            <  1:1625226‑M2/42‑1 (MQ=255)
                                         aataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGa                            <  1:397392‑M2/42‑1 (MQ=255)
                                         aataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGa                            <  1:4063991‑M2/42‑1 (MQ=255)
                                             aacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCATCAGGACGCACTGACCGa                        <  1:2312011‑M2/46‑1 (MQ=255)
                                             aacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGa                        <  1:1712519‑M2/46‑1 (MQ=255)
                                                aaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAAtt                     >  1:2139181‑M2/20‑68 (MQ=255)
                                                 aatctcgagacctattgaAAAGGGTAAAATGCTATAATACCACTCAGCAGGCCGCACTGACCGAatta                    >  1:358398‑M2/19‑67 (MQ=255)
                                                  atctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCa                   <  1:3198245‑M2/51‑1 (MQ=255)
                                                  atctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCa                   <  1:1922225‑M2/51‑1 (MQ=255)
                                                   tctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCAc                  >  1:3320531‑M2/17‑68 (MQ=255)
                                                    gaCCTATTGACAATTAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACt                 <  1:1000107/68‑1 (MQ=255)
                                                    ctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCAGTGACCGAATTCACt                 >  1:2669844‑M2/16‑68 (MQ=255)
                                                      cgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGCCCGAATTCACTAg               <  1:3239874‑M2/55‑1 (MQ=255)
                                                      cgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAg               <  1:121340‑M2/55‑1 (MQ=255)
                                                      cgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAg               <  1:125822‑M2/55‑1 (MQ=255)
                                                      cgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAg               <  1:1966169‑M2/55‑1 (MQ=255)
                                                      cgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAg               <  1:2856528‑M2/55‑1 (MQ=255)
                                                      cgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAg               <  1:3152758‑M2/55‑1 (MQ=255)
                                                      cgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAg               <  1:4470809‑M2/55‑1 (MQ=255)
                                                      cgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAg               <  1:244433‑M2/55‑1 (MQ=255)
                                                      cgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAg               <  1:4145388‑M2/55‑1 (MQ=255)
                                                      cgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAg               <  1:2098630‑M2/55‑1 (MQ=255)
                                                          acctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTaa           >  1:1173037‑M2/10‑68 (MQ=255)
                                                          acctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTaa           >  1:3491126‑M2/10‑68 (MQ=255)
                                                          acctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTaa           >  1:1501603‑M2/10‑68 (MQ=255)
                                                          accgattgaAAAGGCTAAAATGCTATAATTGCACTCAGCAGGCCGCACTGACCGAATTCACTAGTTaa           >  1:912135‑M2/10‑68 (MQ=255)
                                                           cctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACtagttctg          >  1:4601155‑M2/9‑65 (MQ=255)
                                                             aCAATTAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTAATAg        >  1:3537723/1‑68 (MQ=255)
                                                              attgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGATAATAGa       <  1:3632184‑M2/63‑1 (MQ=255)
                                                               ttgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTAATAGaa      <  1:4514040‑M2/64‑1 (MQ=255)
                                                                tgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTAATAGaaa     >  1:3024109‑M2/4‑68 (MQ=255)
                                                                  aAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTAATAGAAATa   <  1:3723942‑M2/67‑1 (MQ=255)
                                                                   aaaGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGATTTCACTAGTTAATAGAaataa  >  1:1792783/1‑68 (MQ=255)
                                                                   aaaGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTAATAGAaataa  >  1:2482737/1‑68 (MQ=255)
                                                                   |                                                                   
CTCATGAGCGGATACATATTTGAATGTATTTAGAAAAATAAACAAATCTCGAGACCTATTGACAATTAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTAATAGAAATAA  >  Exported/839‑973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.