New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? KX077536 7544 =1885 (1.150)7 (0.000) 4/126 9.7 0.39% coding (129/660 nt) unknown cat
?KX077536 7554 = 1763 (1.140)coding (139/660 nt) unknown cat
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2041 total aligned reads displayed.

TTTCAGTCAGTTGCTCAATGTACCTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGCCTGATGAACGCT  >  KX077536/7488‑7622
                                                                  |                                                                    
 ttCAGTCAGTTGCTCAATGTACCTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGAcc                                                                    <  1:1113469/68‑1 (MQ=255)
      tcagtTGCTCAATGTACCTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTaaa                                                               >  1:1036885/1‑68 (MQ=255)
      tcagtTGCTCAATGTACCTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTaaa                                                               <  1:2201193/68‑1 (MQ=255)
      tcagtTGCTCAATGTACCTAGAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTaaa                                                               >  1:3420365/1‑68 (MQ=255)
       cagtTGCTCAATGTACCTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAg                                                              >  1:1155996/1‑68 (MQ=255)
         gtTGCTCAATGTACCTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGaa                                                            <  1:4415481/68‑1 (MQ=255)
         gtTGCTCAATGTACCTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGaa                                                            <  1:3636445/68‑1 (MQ=255)
           tGCTCAATGTACCTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGaaaa                                                          >  1:758200/1‑68 (MQ=255)
            gCTCAATGTACCTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGaaaaa                                                         <  1:3334247/68‑1 (MQ=255)
                  tGTACCTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGca                                                   <  1:3185456/68‑1 (MQ=255)
                      ccTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAg                                               <  1:3278658/68‑1 (MQ=255)
                      ccTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAg                                               >  1:237621/1‑68 (MQ=255)
                      ccTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAg                                               <  1:2247898/68‑1 (MQ=255)
                      ccTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAg                                               >  1:1859384/1‑68 (MQ=255)
                       cTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGt                                              <  1:3933453/68‑1 (MQ=255)
                       cTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGt                                              <  1:721384/68‑1 (MQ=255)
                       cTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGt                                              <  1:2720826/68‑1 (MQ=255)
                        tataACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAATATAAGCTCAAGtt                                             >  1:4311590/1‑68 (MQ=255)
                        tataACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAATATAAGCACAAGtt                                             >  1:684733/1‑68 (MQ=255)
                        tataACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGtt                                             >  1:4029068/1‑68 (MQ=255)
                        tataACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGtt                                             >  1:2940979/1‑68 (MQ=255)
                        tataACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGtt                                             >  1:2772076/1‑68 (MQ=255)
                        tataACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGtt                                             >  1:803745/1‑68 (MQ=255)
                        tataACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGtt                                             >  1:1503322/1‑68 (MQ=255)
                        tataACCAGACCGTTCAGCTGGATATTACGGACTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGtt                                             >  1:1646466/1‑68 (MQ=255)
                          taACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGtttt                                           >  1:1391637/1‑68 (MQ=255)
                           aaacAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTa                                          <  1:176101/65‑1 (MQ=255)
                            aCCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTAt                                         >  1:4556803/1‑68 (MQ=255)
                             ccAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATc                                        >  1:4194748/1‑68 (MQ=255)
                             ccAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATc                                        >  1:2797562/1‑68 (MQ=255)
                             ccAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATc                                        >  1:1303035/1‑68 (MQ=255)
                             ccAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATc                                        >  1:3752457/1‑68 (MQ=255)
                             ccAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATc                                        >  1:2614692/1‑68 (MQ=255)
                             ccAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATc                                        >  1:2107032/1‑68 (MQ=255)
                             ccAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATc                                        >  1:60272/1‑68 (MQ=255)
                             ccAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATc                                        >  1:446720/1‑68 (MQ=255)
                             ccAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATc                                        >  1:1080238/1‑68 (MQ=255)
                             ccAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATc                                        >  1:1335116/1‑68 (MQ=255)
                             ccAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATc                                        >  1:4157260/1‑68 (MQ=255)
                             ccAGACCGTTCAGCTGGATATTACGGCCTTGTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATc                                        >  1:3456139/1‑68 (MQ=255)
                              cAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATcc                                       >  1:3546419/1‑68 (MQ=255)
                               aGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCg                                      >  1:2456189/1‑68 (MQ=255)
                                 aCCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGc                                    <  1:358923/68‑1 (MQ=255)
                                 aCCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGc                                    >  1:4595168/1‑68 (MQ=255)
                                 aCCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGc                                    >  1:193618/1‑68 (MQ=255)
                                 aCCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGc                                    >  1:382833/1‑68 (MQ=255)
                                 aCCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGc                                    >  1:2536386/1‑68 (MQ=255)
                                 aCCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGc                                    >  1:2425015/1‑68 (MQ=255)
                                 aCCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGc                                    >  1:4223608/1‑68 (MQ=255)
                                  ccGTTCTGCTGTATATTACGGCCTTTTTAAAGACCGTAAAGAATAATTAGCACAATTTTTATACGGcc                                   <  1:1582938/68‑1 (MQ=255)
                                  ccGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGcc                                   <  1:3709718/68‑1 (MQ=255)
                                  ccGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGcc                                   <  1:1432409/68‑1 (MQ=255)
                                    gTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCtt                                 <  1:4368369/68‑1 (MQ=255)
                                    gTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCtt                                 <  1:2678491/68‑1 (MQ=255)
                                     ttCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCttt                                <  1:2577377/68‑1 (MQ=255)
                                      tCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTa                               <  1:3230512/68‑1 (MQ=255)
                                       cAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTAt                              <  1:2903544/68‑1 (MQ=255)
                                       cAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTAt                              <  1:3017178/68‑1 (MQ=255)
                                       cAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTAt                              <  1:3144509/68‑1 (MQ=255)
                                        aGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTAtt                             <  1:4676061/68‑1 (MQ=255)
                                        aGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTAtt                             <  1:1467569/68‑1 (MQ=255)
                                        aGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTAtt                             <  1:162329/68‑1 (MQ=255)
                                        aGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTAtt                             <  1:1002712/68‑1 (MQ=255)
                                        aGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTAtt                             <  1:1706890/68‑1 (MQ=255)
                                           tGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTcac                          >  1:2051886/1‑68 (MQ=255)
                                           tGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTcac                          <  1:4626724/68‑1 (MQ=255)
                                           tGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTcac                          >  1:388081/1‑68 (MQ=255)
                                           tGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTcac                          >  1:1906760/1‑68 (MQ=255)
                                           tGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTcac                          >  1:22976/1‑68 (MQ=255)
                                              atatTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACAtt                       <  1:3508124/68‑1 (MQ=255)
                                                atTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCGCATTCt                     >  1:427386/1‑68 (MQ=255)
                                                   aCGGCCTTTTTAAAGGCCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGc                  >  1:2329560/1‑68 (MQ=255)
                                                   aCGGCCTTTTTAAAGCCCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGc                  >  1:4503029/1‑68 (MQ=255)
                                                   aCGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGc                  >  1:1547304/1‑68 (MQ=255)
                                                   aCGGCCTTATTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGc                  >  1:640189/1‑68 (MQ=255)
                                                     ggCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGccc                >  1:1239568/1‑68 (MQ=255)
                                                     ggCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGccc                >  1:2980628/1‑68 (MQ=255)
                                                      gCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCg               <  1:4130760/68‑1 (MQ=255)
                                                        cTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATTCGGCCTTTAATCACATTCTTGCCCGcc             <  1:2406051/68‑1 (MQ=255)
                                                        cTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGcc             <  1:198779/68‑1 (MQ=255)
                                                        cTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGcc             <  1:2153194/68‑1 (MQ=255)
                                                        agttttAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGcc             <  1:1817794/66‑1 (MQ=255)
                                                           tttAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGCCtga          <  1:367399/68‑1 (MQ=255)
                                                           tttAAAGACCGTAAAGAAAAATAAGCACAAGTGTTATCCGGCCTTTATTCACATTCTTGCCCGCCtga          <  1:3780495/68‑1 (MQ=255)
                                                             tAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGCCtgatg        >  1:4763807/1‑68 (MQ=255)
                                                               aaGACCGTAAAGAAAAATAAGGACAAGTTTTATCCGGCCTTTATTCGCATTCTTGCCCGCCtgatgag      >  1:862973/1‑67 (MQ=255)
                                                               aaGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGCCTGATGaa      >  1:1211891/1‑68 (MQ=255)
                                                                aGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGCCTGATGAAc     >  1:4088583/1‑68 (MQ=255)
                                                                aGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGCCTGATGAAc     >  1:4711343/1‑68 (MQ=255)
                                                                aGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGCCTGATGAAc     >  1:505875/1‑68 (MQ=255)
                                                                aGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTCCCCGCCTGATGAAc     >  1:1182089/1‑68 (MQ=255)
                                                                aGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGCCCTTTATTCACATTCTTGCCCGCCTGATGAAc     <  1:894109/68‑1 (MQ=255)
                                                                 gACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGCCTGATGAACg    >  1:4000716/1‑68 (MQ=255)
                                                                 gACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGCCTGATGAACg    >  1:2491467/1‑68 (MQ=255)
                                                                 gACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGCCTGATGAACg    >  1:3061533/1‑68 (MQ=255)
                                                                  aCCGTAAAGAAAAATAAGCACTTGTTTTATCCGGCCTTATTCACATTCTTGCCCGCCTGATGAACGCt  >  1:553829/1‑68 (MQ=255)
                                                                  aCCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGCCTGATGAACGc   >  1:947800/1‑68 (MQ=255)
                                                                  aCCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGCCTGATGAACGc   >  1:3378000/1‑68 (MQ=255)
                                                                  aCCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGCCTGATGAACGc   >  1:3106604/1‑68 (MQ=255)
                                                                  aCCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGCCTGATGAACGc   >  1:283853/1‑68 (MQ=255)
                                                                  |                                                                    
TTTCAGTCAGTTGCTCAATGTACCTATAACCAGACCGTTCAGCTGGATATTACGGCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATTCTTGCCCGCCTGATGAACGCT  >  KX077536/7488‑7622

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.