Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009273	4097480	4098442	963	15 [11]	[11] 22	pfkA	6‑phosphofructokinase I

TCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGA  >  CP009273/4097412‑4097489                                                                    |           tCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTc            >  1:1635976/1‑68 (MQ=255) tCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTc            >  1:2768132/1‑68 (MQ=255) tCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTc            <  1:5606494/68‑1 (MQ=255) tCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTc            >  1:693908/1‑68 (MQ=255)      tCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGAt       >  1:1220299/1‑68 (MQ=255)      tCGATGAGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGAt       >  1:5487047/1‑68 (MQ=255)       cGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGAtt      <  1:1978290/68‑1 (MQ=255)       cGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGAtt      <  1:3013788/68‑1 (MQ=255)       cGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGAtt      <  1:3434220/68‑1 (MQ=255)       cGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGAtt      <  1:4554598/68‑1 (MQ=255)        gATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGAttc     >  1:3317953/1‑67 (MQ=255)         aTGTGCAAGCAGCCTTCCGGCAACAGATTTCATTTTGCATTCCACAGTTCAGAGGTAGTCATGAttcc    <  1:1184132/68‑3 (MQ=255)         aTGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGAttcc    <  1:5876332/68‑3 (MQ=255)          tgtgCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGAttccg   >  1:3995505/1‑65 (MQ=255)           gtgCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTacgg  >  1:5783031/1‑65 (MQ=255)                                                                    |           TCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGA  >  CP009273/4097412‑4097489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑