Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009273 4209763 4232203 22441 71 [1] [0] 97 [aceK]–xylE [aceK],arpA,iclR,metH,yjbB,pepE,rluF,yjbD,lysC,pgi,yjbE,yjbF,yjbG,yjbH,yjbT,psiE,xylE

AAGGTAATCGAAAATATATAACTGGAATTATACTGGGTATTCATTCAGACCTGCCTTAGACCATTCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACAAT  >  CP009273/4232139‑4232271
                                                                 |                                                                   
tgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTg                                                                   >  1:4396322‑M2/66‑68 (MQ=255)
tgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTg                                                                   >  1:1920851‑M2/66‑68 (MQ=255)
 gcattacaaagtcatcgggcattatctgaacataaaacactatcaattagttggagtcattaccCTGa                                                                  <  1:98537‑M2/4‑1 (MQ=255)
 gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGa                                                                  <  1:3112157‑M2/4‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGGTc                                                                >  1:4193391‑M2/63‑68 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:5750060‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:4809871‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:4775115‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:1934799‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                >  1:3084750‑M2/63‑68 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:3340809‑M2/6‑1 (MQ=255)
     gacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCtt                                                              <  1:5540711‑M2/8‑1 (MQ=255)
        aaggtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTa                                                           >  1:3728215‑M2/58‑68 (MQ=255)
           gtcatcgggcattatctgaacataaatcactatcaataagttggagtcattaccCTGATCTTTTATCa                                                        >  1:3123237‑M2/55‑68 (MQ=255)
           gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCa                                                        >  1:4787040‑M2/55‑68 (MQ=255)
             catcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGt                                                      <  1:2373655‑M2/16‑1 (MQ=255)
             catcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGt                                                      <  1:590558‑M2/16‑1 (MQ=255)
             catcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGt                                                      <  1:5608881‑M2/16‑1 (MQ=255)
             catcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGt                                                      <  1:1629553‑M2/16‑1 (MQ=255)
             catcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGt                                                      <  1:5298942‑M2/16‑1 (MQ=255)
                cgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCa                                                   <  1:4930375‑M2/19‑1 (MQ=255)
                  ggcattatccgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCAtt                                                 >  1:1687276‑M2/48‑68 (MQ=255)
                    cattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGa                                               <  1:1387183‑M2/23‑1 (MQ=255)
                    cataatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGa                                               >  1:1340796‑M2/46‑68 (MQ=255)
                     attatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGAt                                              >  1:4863959‑M2/45‑68 (MQ=255)
                     attatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGAt                                              <  1:3756286‑M2/24‑1 (MQ=255)
                     attatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGAt                                              <  1:4198268‑M2/24‑1 (MQ=255)
                     attatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGAt                                              <  1:5100019‑M2/24‑1 (MQ=255)
                         tctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTg                                          >  1:4164647‑M2/41‑68 (MQ=255)
                         tctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTg                                          >  1:2292295‑M2/41‑68 (MQ=255)
                         tctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTg                                          >  1:169831‑M2/41‑68 (MQ=255)
                         tctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTg                                          >  1:2929527‑M2/41‑68 (MQ=255)
                         tctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTg                                          >  1:1960650‑M2/41‑68 (MQ=255)
                         tctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTg                                          >  1:3088655‑M2/41‑68 (MQ=255)
                         tctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTAACAGTGCATTGATGTTg                                          >  1:725359‑M2/41‑68 (MQ=255)
                             aacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAAt                                      >  1:1773875‑M2/37‑68 (MQ=255)
                              acataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAAtt                                     <  1:24920‑M2/33‑1 (MQ=255)
                              acataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAAtt                                     >  1:929014‑M2/36‑68 (MQ=255)
                              acataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAAtt                                     <  1:874381‑M2/33‑1 (MQ=255)
                              acataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAAtt                                     <  1:1969346‑M2/33‑1 (MQ=255)
                              acataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAAtt                                     <  1:5584135‑M2/33‑1 (MQ=255)
                                ataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGt                                   >  1:1803010‑M2/34‑68 (MQ=255)
                                ataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGt                                   <  1:6104473‑M2/35‑1 (MQ=255)
                                ataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGt                                   <  1:3254714‑M2/35‑1 (MQ=255)
                                ataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGt                                   >  1:3813248‑M2/34‑68 (MQ=255)
                                   aaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAg                                <  1:2608756‑M2/38‑1 (MQ=255)
                                     acactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGATTTGTCAGGc                              >  1:2900092‑M2/29‑68 (MQ=255)
                                     acactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGc                              >  1:4779738‑M2/29‑68 (MQ=255)
                                     acactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGc                              >  1:3570389‑M2/29‑68 (MQ=255)
                                       actatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAg                            <  1:4981279‑M2/42‑1 (MQ=255)
                                       actatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAg                            <  1:1160174‑M2/42‑1 (MQ=255)
                                       actatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAg                            >  1:1381614‑M2/27‑68 (MQ=255)
                                       actatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAg                            <  1:214908‑M2/42‑1 (MQ=255)
                                        ctatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGt                           <  1:3745281‑M2/43‑1 (MQ=255)
                                        ctatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGt                           >  1:4622429‑M2/26‑68 (MQ=255)
                                         tatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGtt                          <  1:295238‑M2/44‑1 (MQ=255)
                                          atcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTa                         >  1:1632384‑M2/24‑68 (MQ=255)
                                          atcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTa                         >  1:1831195‑M2/24‑68 (MQ=255)
                                           tcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTaa                        >  1:320946‑M2/23‑68 (MQ=255)
                                              ataagtgggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGc                     <  1:5630266‑M2/49‑1 (MQ=255)
                                                 agttggagtcattaccCTGGTCTTTTATCAGTGCGTTGATGTTGGAATTGTCAGGCAGTTAAGGCAAt                  >  1:1197638‑M2/17‑68 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTTAGGCAAt                  >  1:5109921‑M2/17‑68 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAAt                  >  1:4345025‑M2/17‑68 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAAt                  >  1:2270097‑M2/17‑68 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAAt                  >  1:2761692‑M2/17‑68 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAAt                  >  1:30344‑M2/17‑68 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAAt                  >  1:5812178‑M2/17‑68 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGACAGGCAGTTAAGGcaaa                  >  1:857053‑M2/17‑67 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTAATCAGTGCAATGATGTTGGAATTGTCAGGCAGTTAAGGCAAt                  <  1:2490673‑M2/52‑1 (MQ=255)
                                                  gttggaggccttaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAAtt                 <  1:2057767‑M2/53‑1 (MQ=255)
                                                   ttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGATTTGTCAGGCAGTTAAGGCAATTa                >  1:4991400‑M2/15‑68 (MQ=255)
                                                     ggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATc              >  1:1801434‑M2/13‑68 (MQ=255)
                                                       attcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCAt            <  1:1784474‑M2/58‑1 (MQ=255)
                                                       agtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGTATTGTCAGGCAGTTAAGGCAATTATCAt            <  1:3825435‑M2/58‑1 (MQ=255)
                                                       agtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCAt            >  1:1110674‑M2/11‑68 (MQ=255)
                                                       agtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCAt            >  1:5941340‑M2/11‑68 (MQ=255)
                                                       agtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCAt            <  1:3600638‑M2/58‑1 (MQ=255)
                                                        gtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCAtt           >  1:4134145‑M2/10‑68 (MQ=255)
                                                        gtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCAtt           >  1:2894648‑M2/10‑68 (MQ=255)
                                                         tcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCAttt          >  1:5123631‑M2/9‑68 (MQ=255)
                                                            ttaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCAtttttt       >  1:693875‑M2/6‑68 (MQ=255)
                                                             taccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTa      <  1:4814715‑M2/64‑1 (MQ=255)
                                                               ccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACa    >  1:4457061‑M2/3‑68 (MQ=255)
                                                               ccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACa    <  1:5502445‑M2/66‑1 (MQ=255)
                                                               ccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACa    >  1:6081394‑M2/3‑68 (MQ=255)
                                                               ccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACa    >  1:4124395‑M2/3‑68 (MQ=255)
                                                               ccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTATTTACa    >  1:3646826‑M2/3‑68 (MQ=255)
                                                                cCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTTCaa   >  1:4137428‑M2/2‑68 (MQ=255)
                                                                cCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACaa   >  1:2015166‑M2/2‑68 (MQ=255)
                                                                cCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACaa   >  1:4282488‑M2/2‑68 (MQ=255)
                                                                cCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACaa   >  1:1790277‑M2/2‑68 (MQ=255)
                                                                cCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACaa   >  1:3643433‑M2/2‑68 (MQ=255)
                                                                cCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACaa   >  1:2821436‑M2/2‑68 (MQ=255)
                                                                cCTGATCTTATATCAGTGCAGTGATGTTGGAATTGTCAGGCAGTTAAGGCATTTATCATTTTTTACaa   >  1:233897‑M2/2‑68 (MQ=255)
                                                                 cTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACAAt  <  1:2894787/68‑1 (MQ=255)
                                                                 cTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACAAt  <  1:3858541/68‑1 (MQ=255)
                                                                 cTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACAAt  >  1:3747042/1‑68 (MQ=255)
                                                                 |                                                                   
AAGGTAATCGAAAATATATAACTGGAATTATACTGGGTATTCATTCAGACCTGCCTTAGACCATTCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACAAT  >  CP009273/4232139‑4232271

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: