| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | KX077536 | 1 = | 0 (0.000) | 1789 (1.060) +AACAACAG |
24/118 | 5.6 | 100% | intergenic (–/‑1098) | –/unknown | –/BLA |
| ? | KX077536 | 8136 = | NA (NA) | intergenic (+61/–) | unknown/– | cat/– | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 1920 total aligned reads displayed.
GGAAGCGGAATATATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < KX077536/67‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTT > KX077536/8136‑8187 |||||||| GGAAGCGGAATATATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAA < 1:356485/68‑1 GAAGCGGAATATATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAA > 1:3888137/1‑68 GAAGCGGAATATATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAA < 1:1629992/68‑1 AAGCGGAATATATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAAC < 1:2460807/68‑1 AGCGGAATATATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACA < 1:3084814/68‑1 AGCGGAATATATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACA < 1:318714/68‑1 AGCGGAATATATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACA < 1:5634623/68‑1 GCGGAATATATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAA < 1:3459487/68‑1 GGAATATATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACA > 1:1819390/1‑68 GGAATATATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACA < 1:5323728/68‑1 GAATATATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAG < 1:5179287/68‑1 AATATATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGA > 1:2666814/1‑68 ATATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAA > 1:4633858/1‑68 ATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAA > 1:1143512/1‑68 TCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAAC > 1:3992058/1‑68 TCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAAC > 1:4773868/1‑68 TCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAAC > 1:2247265/1‑68 TCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAAC > 1:2208316/1‑68 TCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAAC > 1:4157938/1‑68 TCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAAC > 1:2078522/1‑68 TCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAAC > 1:1198920/1‑68 TCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAAC > 1:1265961/1‑68 TCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAAC > 1:5420203/1‑68 TCCCTAGGTCTAGGGCGGCGGATTAGTCCTACTCAGGAGAGCGTTCACCGACAAACAACACATAAAAC > 1:2887621/1‑68 TCCCTAGGTCTAGGGCGGCGGATTAGTCCTACTCAGCAGAGCGTACACCGACAAACAACAGATAAAAC > 1:1382038/1‑68 CCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACG < 1:3294372/68‑1 CCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACG < 1:2738370/68‑1 CCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACG < 1:3356192/68‑1 CCCTAGGTCTAGGGCGGAGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACG > 1:3755449/1‑68 ccgAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGA > 1:1104462/4‑68 ccgAGGTCTAGGGCGGCGGATTTGTACTACTCAGGAGAGCGTTCACCGACAAACAACAGATTAAACGA > 1:4433676/4‑68 CCTAGGTCTTGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGA < 1:1057033/68‑1 CCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATATAACGA > 1:4808093/1‑68 CCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACaa > 1:440128/1‑66 CCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGA < 1:5126132/68‑1 CCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGA > 1:3508414/1‑68 CCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGA > 1:778704/1‑68 CCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGA > 1:149097/1‑68 CCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGA < 1:5469267/68‑1 CCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGA > 1:5371725/1‑68 CCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGA > 1:392948/1‑68 CCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGA > 1:4877327/1‑68 CCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGA > 1:2151836/1‑68 CCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGA > 1:4332608/1‑68 CCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGA > 1:2789132/1‑68 CCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGA > 1:4735910/1‑68 CCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGATCACCGACAAACAACAGATAAAACGA > 1:911895/1‑68 CTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAA > 1:5560216/1‑68 CTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAA > 1:950/1‑68 CTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAA > 1:1338887/1‑68 CTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAA > 1:1442140/1‑68 CTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTACACCGACAAACAACAGATAAAACGAA > 1:21091/1‑68 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG < 1:4939727/68‑1 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG > 1:2312687/1‑68 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG < 1:2380466/68‑1 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG > 1:2418752/1‑68 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG > 1:4671756/1‑68 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG < 1:2026094/68‑1 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG < 1:1955190/68‑1 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG < 1:4477042/68‑1 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG > 1:52525/1‑68 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG < 1:1881560/68‑1 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG > 1:2835317/1‑68 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG < 1:4265053/68‑1 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG > 1:4224820/1‑68 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG > 1:4125415/1‑68 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG < 1:4069336/68‑1 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG > 1:5595880/1‑68 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG < 1:1559629/68‑1 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG < 1:651981/68‑1 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG < 1:3146155/68‑1 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG < 1:699577/68‑1 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG > 1:3689/1‑68 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGG < 1:865145/68‑1 GGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTGCACCGACAATCAACAGATAAAGCGAAAGG > 1:5512236/1‑68 ggCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGAAAAACAACAGATAAAACGAAAGGC < 1:5003934/66‑1 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACATCAGATAAAACGAAAGGC < 1:3584728/68‑1 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACACCAGATAAAACGAAAGGC < 1:2619500/68‑1 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAACCGAAAGGC > 1:3236051/1‑68 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGcc > 1:4595351/1‑66 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGC < 1:1677875/68‑1 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGC < 1:82155/68‑1 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGC < 1:3837487/68‑1 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGC < 1:364390/68‑1 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGC > 1:597435/1‑68 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGC < 1:4029271/68‑1 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGC > 1:3415226/1‑68 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGC < 1:2504656/68‑1 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGC > 1:1723607/1‑68 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGC > 1:1785721/1‑68 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGC < 1:52865/68‑1 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGC < 1:2556480/68‑1 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGC < 1:5219697/68‑1 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGC < 1:4543372/68‑1 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGC < 1:5062998/68‑1 GTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGGTCACCGACAAACAACAGATAAAACGAAAGGC < 1:2978455/68‑1 TCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCT > 1:2920309/1‑68 GGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCTCAGTC < 1:302288/68‑1 GGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCTCAGTC < 1:10006/68‑1 CACCGACAAACAACAGATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATTTGATGcc < 1:1590682/68‑3 |||||||| GGAAGCGGAATATATCCCTAGGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < KX077536/67‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTT > KX077536/8136‑8187 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |