| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4161725 | 20 (0.350) | 3 (0.000) | 3/122 | 4.0 | 0.45% | intergenic (+41/‑260) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding |
| ? | Exported | = 2325 | 1315 (0.060) | intergenic (+91/–) | fdh/– | formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag/– | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 4600 total aligned reads displayed.
GTCGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGT > Exported/2257‑2365 | tCGACGTGGAGGCCGGGGGATCGCATGGTACGCGTGCTAGAGGCATCAAATATAACGTAAGGCTCAGt < 1:4170462/68‑1 (MQ=11) tCGACCTGCAGCCCGGGGGTGCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGt < 1:4397135/68‑1 (MQ=255) tCGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGt < 1:4687111/68‑1 (MQ=39) tCGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGt < 1:836938/68‑1 (MQ=39) tCGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGt < 1:5289937/68‑1 (MQ=39) tCGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGt < 1:3974028/68‑1 (MQ=39) tCGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGt < 1:3128847/68‑1 (MQ=39) tCGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGt > 1:5464311/1‑68 (MQ=39) tCGACCGGCAGCCCGGGGGATCACATGGTACGCGTGCTAGAGTCATCAAATAAAACGAAAGGCTCAGt < 1:3448570/68‑1 (MQ=11) cGACCTGCAGCCGGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:5247152/68‑1 (MQ=255) cGACCTGCAGCCCGGGGGTTCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:2342452/68‑1 (MQ=255) cGACCTGCAGCCCGGGGGATCCGATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:3176501/68‑1 (MQ=255) cGACCTGCAGCCCGGGGGATCCCATTGTACGCGTGCTATAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:4031318/68‑1 (MQ=11) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACTAAAGGCTCAGTc < 1:1565724/68‑1 (MQ=255) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:4123328/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:4795530/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:4435688/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:3527662/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:434645/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:4305245/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:425049/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:36828/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc > 1:3855350/1‑68 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:4077919/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:3722228/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:3767614/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:3909453/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:5408783/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:950571/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:893999/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:786163/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:72718/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:674596/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:622101/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:5649756/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:5596350/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:5509488/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:4591484/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:5346268/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:5198581/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:5148119/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:5105356/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:5060472/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:5006146/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:4909068/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:3589606/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:4745629/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:2664873/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:1893313/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:2091177/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:1779980/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:1734365/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:1684494/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:162961/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:1513548/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:1460287/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:2507791/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:132431/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:2759154/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:2818085/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:2924661/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:3392426/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:3331119/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:3286154/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:321976/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:3083207/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:117605/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:3023679/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTc < 1:1277800/68‑1 (MQ=37) cGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCACTc < 1:1422323/68‑1 (MQ=255) cGACCCGCAGCCCGGGGGATCCCATGGTACGCGTGCAAGAGGCATGAAATAAAACGAAAGGCTCAGTc < 1:2183059/68‑1 (MQ=11) aCCTGCAGCCAGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGa > 1:1053873/1‑68 (MQ=18) ccTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGaa > 1:5552493/1‑68 (MQ=31) ccTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGaa < 1:2400174/68‑1 (MQ=31) ccTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGaa > 1:2606778/1‑68 (MQ=31) ccTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGaa < 1:1121629/68‑1 (MQ=31) ccTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGaa > 1:4941932/1‑68 (MQ=31) ccTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACCAAAGGCTCAGTCGaa < 1:4494679/68‑1 (MQ=14) tGCTAGAGGCATCAAATAAAAGGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgttt > 1:1226351/1‑68 (MQ=14) tGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgttt > 1:3485018/1‑68 (MQ=31) tGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgttt > 1:137420/1‑68 (MQ=31) tGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgttt > 1:1831830/1‑68 (MQ=31) tGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgttt > 1:1988554/1‑68 (MQ=31) tGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgttt > 1:2137486/1‑68 (MQ=31) tGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgttt > 1:485783/1‑68 (MQ=31) tGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgttt > 1:2232016/1‑68 (MQ=31) tGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgttt > 1:4642716/1‑68 (MQ=31) tGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgttt > 1:2555151/1‑68 (MQ=31) tGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgttt > 1:2974536/1‑68 (MQ=31) tGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgttt > 1:2874285/1‑68 (MQ=31) tGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGtggttt > 1:3811016/1‑68 (MQ=14) tGCTAGAGACATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgttt > 1:2033509/1‑68 (MQ=14) cTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgtttgt > 1:1001169/1‑68 (MQ=35) cTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgtttgt < 1:1940894/68‑1 (MQ=35) cTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgtttgt < 1:3643559/68‑1 (MQ=35) cTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgtttgt < 1:2454321/68‑1 (MQ=35) cTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgtttgt < 1:4548139/68‑1 (MQ=35) cTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGttgtttgt < 1:2286816/68‑1 (MQ=35) tAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTc < 1:4203825/68‑1 (MQ=35) gagGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCgg > 1:2712186/1‑68 (MQ=31) | GTCGACCTGCAGCCCGGGGGATCCCATGGTACGCGTGCTAGAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGT > Exported/2257‑2365 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |