New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1772238	38 (0.610)	13 (0.210)	12/380	3.0	25.7%	coding (1168/1215 nt)	ydiM	putative exporter YdiM
	?	NC_000913	1772242 =	38 (0.630)					coding (1172/1215 nt)	ydiM	putative exporter YdiM

TCTCATTTATTGCTCTGTTTACCGTCTGCCTGCATCCCACA‑TTTTATGTGGTGATAATATTTGCTTTTGTCA‑TTGG‑TTTTACCTCTGCTGGAGGTGTTGTGCAAATTGGCCTGACG‑TTAATGGCTGAACG‑TTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑AAAATCGCGATC‑AAAAAC‑AAACTATGACATGCAATATTCCTGGAAACATAAACTTTATGCCATGTA‑CCCAGGG‑AAAATCATCTTCAGTATAGTAATTATGTAAACCGTCGGAGAACAATACGTACGGTAACGAAATTATCTTTCAGCAAGGAGCTGTGAAAATGTCTCAAAATAAGGCTTTCAGCACGCCATTTATCCTGGCTGTTCTTTGT  >  NC_000913/1771921‑1772562                                                                                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                                                                                tctcATTTATTGCTCTGTTTACCGTCTGCCTGCATCCCACA‑TTTTATGTGGTGATAATATTTGCTTTTGTCA‑TTGGTTTTTACCTCTGCTGGAGGTGTTGTGCAAA‑TGGCCTGACG‑TT‑ATGGCTGAACG‑TTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑TTTTTTATCTGGC‑ACTG‑TTTATCGGC‑TTACGCA‑CCGC‑‑‑‑AAAcacgcgatcactcgctaa                                                                                                                                                                                                                                                                                                                               >  1:342005‑M1/1‑316 (MQ=255)                           tgcctgcATCCCACA‑TTTTATGTGGTGATAATATTTGCTTTTGTCA‑TTGG‑TTTTACCTCTGCTGGAGGTGTTGTGCAAATTGGCCTGACGTTTAATGGCTGAACG‑TTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGATTTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑‑TTTTTA‑CTGGC‑ACTGTTTTATCGGCTTTACGCA‑CCGC‑‑‑‑AAAcgcggcatcactcgctaaaggaaaatgtcgct                                                                                                                                                                                                                                                                                                                 >  1:342007‑M1/1‑293 (MQ=255)                                gcATCCCACA‑TTTTATGTGGTGATAATATTTGCTTTTGTCA‑TTGG‑TTTTACCTCTGCTGGAGGTGTTGTGC‑AATTGGCCTGACG‑TTAATGGCTG‑ACG‑TTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGCA‑‑AAAAAAACGCGGCAt                                                                                                                                                                                                                                                                                                                                      <  1:1166290/297‑1 (MQ=255)                                     ccACATTTTTATGTGGTGATAATATTTGCTTTTGTCA‑TTGG‑TTTTACCTCTGCTGGAGGTGTTGTGCAAATTGGCCTGACG‑TTAATGGCTGAACGTTTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCC‑TCGCTGCCAT‑GG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCAc                                                                                                                                                                                                                                                                                                                                   >  1:1166300/1‑296 (MQ=255)                                     ccACA‑TTTTATGTGGTGATAATATTTGCTTTTGTCA‑TTGG‑TTTTACCTCTGCTGGAGGTGTTGTGCAAATTGGCCTGACG‑TTAATGGCTGAACGTTTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGATTTACGGCTCATCTGTCCC‑AAAGAAGTATTGCC‑ATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCAT‑‑G‑TTTTTAT‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCA‑CCGC‑‑‑‑AAAAAACGCGGCATCAc                                                                                                                                                                                                                                                                                                                                   >  1:1166301/1‑293 (MQ=255)                                                         aataTTTGCTTTTGTCA‑TTGG‑TTTTACCTCTGCTGGAGGTGTTGTGCAAATTGGCCTGACG‑TTAATGGCTGAACG‑TTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCC‑TCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCA‑CCGC‑‑‑AAAA                                                                                                                                                                                                                                                                                                                                                 >  1:1166308‑M1/1‑261 (MQ=255)                                                             tttGCTTTTGTCA‑TTGG‑TTTTACCTCTGCTGGAGGTGTTGTGCAAATTGGCCTGACG‑TTAATGGCTGAACGTTTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCAT‑GG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCA‑CCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTc                                                                                                                                                                                                                                                                                                               >  1:1166310/1‑290 (MQ=255)                                                                   tttGTCATTTGG‑TTTTACCTCTGCTGGAGGTGTTGTGCAAATTGGCCTGACG‑TT‑ATGGCTGAACG‑TTTTCCCTTCGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATATTTATGT‑GG‑TTCGATACCGCC‑TCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCA‑CCGC‑‑‑AAAAcgcggcatcactcgctaaaggaaaatgtcgctccggggtgggtaatgcaatattcttttcaggtca                                                                                                                                                                                                                                                                               >  1:342013‑M1/1‑252 (MQ=255)                                                                                       tctGCTGGAGGTGTTGTGCAAATTGGCCTGACG‑TTAATGGCTG‑ACG‑TTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATTCG‑GTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTa                                                                                                                                                                                                                                                            <  1:1166309/314‑1 (MQ=255)                                                                                       tctGCTGGAGGTGTTGTGC‑AATTGGCCTGACG‑TTAA‑GGCTG‑ACG‑TTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TCATGT‑GG‑TTCGATACCGCCATCGCTG‑CATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGa                                                                                                                                                                                                                                                                 <  1:1166314/306‑1 (MQ=255)                                                                                                   gttgtGCAAATTGGCCTGACG‑TTAATGGCTGAACGTTTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCC‑TCGCTGCCAT‑GT‑TTTTTAT‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAat                                                                                                                                                                                                                                                                                         >  1:1166320/1‑275 (MQ=255)                                                                                                    ttgtGCAAATTGGCCTGACG‑TTAATGGCTGAACGTTTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCAT‑GG‑TTTTTAT‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCtt                                                                                                                                                                                                                                                             >  1:1166322/1‑301 (MQ=255)                                                                                                    ttgtGC‑AATTGGCCTGACG‑TTAATGGCTG‑ACG‑TTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCAt                                                                                                                                                                                                                                                                                                                                      <  1:1166316/231‑1 (MQ=255)                                                                                                                gCCTGACG‑TTAATGGCTG‑ACG‑TTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCAt                                                                                                                                                                                                                                                                                                                                      <  1:1166317/220‑1 (MQ=255)                                                                                                                       g‑TTAATGGCTGAACG‑TTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCAT‑GG‑‑TTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCA‑CCGC‑‑‑‑AAAAAACGCGGCATCACTCGCT‑AAAGG‑‑AAATGTCGCTcc                                                                                                                                                                                                                                                                                                          >  1:1166328/1‑235 (MQ=255)                                                                                                                           aaTGGCTGAACG‑TTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑‑AAAcgcggcatcactcgctaaaggaaaatgtcgctccggtgggtaatgcaatatttcttttcaggttcatgcaagatct                                                                                                                                                                                                                                                                     >  1:342018‑M1/1‑199 (MQ=255)                                                                                                                           aaTGGCTGAACG‑TTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCA‑CCGC‑‑‑‑AAAcgcggcatcactcgctaaaggaaaatgtcgctccgggtgggtaatgcaatattcttttcaggtcatgcaagatcttacggataataactctttctgcgctaactaaggaaatgcgatcaacaa                                                                                                                                                                                                                      >  1:342019‑M1/1‑198 (MQ=255)                                                                                                                               gCTGAACG‑TTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCA‑CCGC‑‑‑AAAAcgcggcatcactcgctaaaaggaaaatgtcgctccgggtgggtaatgcaatattcttttca                                                                                                                                                                                                                                                                                    >  1:342020‑M1/1‑195 (MQ=255)                                                                                                                                    aCG‑TTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCA‑CCGC‑‑‑AAAAcgcggcatcactcgctaaaggaaaatgtcgctccgggtgggtaatgcaatattcttttcaggtcatgcaagatc                                                                                                                                                                                                                                                                       >  1:342021‑M1/1‑190 (MQ=255)                                                                                                                                                aCGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCAT‑GG‑TTTTTTATCTGGC‑ACTG‑TTTATCGGC‑TTACGCA‑CCGC‑‑‑AAAAAAACGCGGCATCACTCGCTAAAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAg                                                                                                                                                                                                                                                                            >  1:1166331/1‑244 (MQ=255)                                                                                                                                                 cGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCAT‑GG‑TTTTTAT‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCA‑CCGC‑‑‑AAAAAAACGCGGCATCACTCGCt                                                                                                                                                                                                                                                                                                                              >  1:1166333/1‑196 (MQ=255)                                                                                                                                                 cGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCAT‑GG‑‑TTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCA‑CCGC‑‑‑AAAAAAACGCGGCATCACTCGCt                                                                                                                                                                                                                                                                                                                              >  1:1166332/1‑195 (MQ=255)                                                                                                                                                      aaGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGCAA‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAATATTT‑Ctttt                                                                                                                                                                                                                                                                               <  1:1166329/238‑1 (MQ=255)                                                                                                                                                                     ggATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTAC‑GCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGCAA‑AAAAAAACGCGGCATCACTCGCT‑AAAGGAAAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑AAAATCGCGATC‑AAaaac‑a                                                                                                                                                                                                     <  1:1166330/292‑1 (MQ=255)                                                                                                                                                                       aTCTATTACAGTGCGGGCAGTAATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCCAAAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑‑TTTTTA‑CTGGCAACTG‑TTTATCGGC‑TTACGCA‑CCGC‑‑‑AAAAcgcggcatcactcgctaaaaggaaaatgtcgctccggggtgggtaatgcaatattctttcaggt                                                                                                                                                                                                                                                                                 >  1:342024‑M1/1‑158 (MQ=255)                                                                                                                                                                                              ttGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTG‑CATCGGTTTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGCAAAAAAAAAACGCGGCATCACTCGCT‑AAAGGAAAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑AAAATCGCGATC‑AAAAAC‑AAACTATGACATGCAATATTCCTGGAAACATa                                                                                                                                                                      <  1:1166335/301‑1 (MQ=255)                                                                                                                                                                                                       ttACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCAT‑GG‑TTTTTAT‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑C‑TTTCAGGTCATGCAAGATCTTACGGataa                                                                                                                                                                                                                                                     >  1:1166337/1‑211 (MQ=255)                                                                                                                                                                                                        tACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCAT‑GG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑a                                                                                                                                                                                                                         >  1:1166336/1‑237 (MQ=255)                                                                                                                                                                                                             ttCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCAT‑GG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGCA‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑‑AAATCGCGATC‑AAAAACAAAACTATGACATGCAatat                                                                                                                                                                                   >  1:1166338/1‑269 (MQ=255)                                                                                                                                                                                                               ccGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGGTTTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAcgcggcatcactcgctaaaaggaaaatgtcgctccgggtggggtaatgcaatattcttttcaggtcatgcaagatcttacggataaataactctttctgcgctaactaaggaaaatcg                                                                                                                                                                                                                           >  1:342025‑M1/1‑119 (MQ=255)                                                                                                                                                                                                                         aCGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCAT‑GG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑a                                                                                                                                                                                                                         >  1:1166340/1‑221 (MQ=255)                                                                                                                                                                                                                                       cc‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAcacgcgcatcactcgctaaaggaaaatgtcgctccgggtgggtaagtgcaatattcttttcaggtctatgcaagatct                                                                                                                                                                                                                                                                   >  1:342027‑M1/1‑95 (MQ=255)                                                                                                                                                                                                                                               agTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGCAA‑AAAAAAACGCGGCATCACTCGCT‑AAAGGAAAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGGAAAAATCGCGATC‑AAAAAC‑AAACTATGACATGCAATATTCCTGGAAACATaa                                                                                                                                                                     <  1:1166339/255‑1 (MQ=255)                                                                                                                                                                                                                                                     gCCGATA‑TTATGTGGG‑TTCGATACCGCCATCGCTGCCATCGGTTTTTTTA‑CTGGC‑ACTGTTTTATCGGC‑TT‑CGCA‑CCGC‑‑‑‑‑‑AAAACGC‑GCATCACTCGCT‑aaa                                                                                                                                                                                                                                                                                                                          >  1:342028/1‑101 (MQ=255)                                                                                                                                                                                                                                                             ttatGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAcgcggcatcactcgctaaaaggaaaatgtcgctccgggtggggtaagtgcaatattcttttcaggtcatgcaagatcttcggataataa                                                                                                                                                                                                                                                        >  1:342029‑M1/1‑75 (MQ=255)                                                                                                                                                                                                                                                               atGT‑GGTTTCGATACCGCCATCGCTGCCATCGG‑‑TTTTTA‑CTGGC‑ACTGTTTTATCGGC‑TTACGCA‑CCGC‑‑‑AAAAcgcggcatcactcgctaaaggaaatgtcgctccgggtgggtaatgcaatattcttttcaggtcatgcaagatcttacggataaataactctttctgcgctaactaaggaaaatcgcgatcaaaacaa                                                                                                                                                                                                                  >  1:342030‑M1/1‑73 (MQ=255)                                                                                                                                                                                                                                                                                          ccATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑‑AAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑AAAATCGCGATC‑AAAAAC‑AAACTATGACATGCAATATTCCTGGAAACATAAACTTTATGCCATGTA‑CCCAGGG‑AAAATCATCTTCAg                                                                                                                               <  1:1166344/246‑1 (MQ=255)                                                                                                                                                                                                                                                                                          cattCGG‑TTTTTTA‑CTGGC‑ACTGTTTTATCGGC‑TTACGCAGCCGCA‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCt                                                                                                                                                                                                                                                                                                            <  1:1166345/82‑1 (MQ=255)                                                                                                                                                                                                                                                                                                g‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑aa                                                                                                                                                                                                                                                                                                                     <  1:1166346/68‑1 (MQ=255)                                                                                                                                                                                                                                                                                                             gC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑AAAATCGCGATC‑AAAAAC‑AAACTATGACATGCAatat                                                                                                                                                                                   >  1:1166352/1‑180 (MQ=255)                                                                                                                                                                                                                                                                                                                     tttATCGGC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGGAAAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑AAAATCGCGATC‑AAaaac‑aaac                                                                                                                                                                                                  <  1:1166347/160‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                            gC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTC‑‑GGT‑‑GGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑aaa                                                                                                                                                                                                                       <  1:1166348/130‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                             c‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTC‑‑GGT‑‑GGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑aaa                                                                                                                                                                                                                       <  1:1166351/129‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                             c‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCT‑CGGGT‑‑GGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑aaa                                                                                                                                                                                                                       <  1:1166350/130‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                              ctacgccagccgca‑‑AAAAcgcggcatcactcgctaaaggaaatgcgctcggtggtaatgcaatattctttttcaggtcatgcaagatcttacggataaataactcttttctgcgctaactaaggaaaatcgcgatcaaaaacaaactatgacatgcaatattcctggaaacataaacttatgccatgtacccagggaaaatcatcttcagtatagtaattatgtaaaccgtcggagaacaatacgtaggtaacgaaattatctttcagcaaggagctgtgaaaatgtctcaaaataaggcttttcagcacgccatttatcctggctgttcttttgtattttacttcagctact  <  1:342037‑M1/347‑336 (MQ=255)                                                                                                                                                                                                                                                                                                                               ttACGCAGCCGCAAAAAAAAAACGCGGCATCACTCGCT‑AAAGGAAAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑AAAATCGCGATC‑AAAAAC‑AAACTATGACATGCAATATTCCTGGAAACATAAAC‑TTATGCCATGTA‑CCCAGGG‑AAAatc                                                                                                                                       <  1:342035/210‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                                 aCGCAGCCGCAA‑AAAAAAACGCGGCATCACTCGCT‑AAAGGAAAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TTGCTTTTc                                                                                                                                                                                                                                                                              <  1:342041/80‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                                 aCGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑AAAATCGCGATC‑AAAAAC‑AAACTATGACATGCAATATTCCTGGAAACATAAACTTTATGCCATGTA‑CCCAGGG‑AAAATCATCTTCAGTATAGTAATTATGTAAACCGTCGGAGAACAATACGTACGGTAACGAAATTATCttt                                                                       <  1:1166349/269‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                                  cGCAGCCGCA‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAAAGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTTCTGCGCTAACTAAGG‑AAAA‑CGCGATC‑AAAAAC‑AAACTATGACATGCAATATTCCTGGAAACATAAAACTTATGCCATGTA‑CCCAGGG‑AAAATCATCTTCAGTATAGTAATTATGTAAACCGTCGGAGAAc                                                                                                  <  1:342036/242‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                                       aaaaaaaaaaaaaaCGCGGCATCACTCGCT‑AAAGGAAAAATGTCGCTCCGGGTGGGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTTCTGCGCTAACTAAGG‑AAAATCGCGATC‑AAAAAC‑AAACTATGACATGCAATATTCCTGGAAACATAAAC‑TTATGCCATGTACCCCAGGGAAAAATCATCTTCAGTATAGTAATTATGTaaa                                                                                                              <  1:342044/224‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                                         aaaaaaaaaaaaCGCGGCATCACTCGCT‑AAAGGAAAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTTCTGCGCTAACTAAGG‑AAAATCGCGATCAAAAAAC‑AAACTATGACATGCAATATTCCTGGAAACATAAAACTTATGCCATGTA‑CCCAGGG‑AAAATCATCTTCAGTATAGTAATTATGTAAACCGTCGGAGAAc                                                                                                  <  1:342045/235‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                                               aaaaaaCGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑AAAATCGCGATC‑AAAAAC‑AAACTATGACATGCAATATTCCTGGAAACATAAACTTTATGCCATGTA‑CCCAGGG‑aa                                                                                                                                           >  1:1166354/1‑190 (MQ=255)                                                                                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                                                                                TCTCATTTATTGCTCTGTTTACCGTCTGCCTGCATCCCACA‑TTTTATGTGGTGATAATATTTGCTTTTGTCA‑TTGG‑TTTTACCTCTGCTGGAGGTGTTGTGCAAATTGGCCTGACG‑TTAATGGCTGAACG‑TTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGT‑ATTGCGACCTTTACTATTCCGTTGA‑TTACGGCTCATCTGTCCC‑AAAGAAGTATTGCCGATA‑TTATGT‑GG‑TTCGATACCGCCATCGCTGCCATCGG‑TTTTTTA‑CTGGC‑ACTG‑TTTATCGGC‑TTACGCAGCCGC‑‑‑AAAAAAACGCGGCATCACTCGCT‑AAAGG‑AAAATGTCGCTCCGGGT‑GGGTAATGCAATA‑TT‑CTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTC‑TTTCTGCGCTAACTAAGG‑AAAATCGCGATC‑AAAAAC‑AAACTATGACATGCAATATTCCTGGAAACATAAACTTTATGCCATGTA‑CCCAGGG‑AAAATCATCTTCAGTATAGTAATTATGTAAACCGTCGGAGAACAATACGTACGGTAACGAAATTATCTTTCAGCAAGGAGCTGTGAAAATGTCTCAAAATAAGGCTTTCAGCACGCCATTTATCCTGGCTGTTCTTTGT  >  NC_000913/1771921‑1772562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.