New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1821865	17 (0.270)	17 (0.270)	13/388	2.8	50.0%	intergenic (‑246/+53)	chbB/osmE	N,N'‑diacetylchitobiose‑specific PTS enzyme IIB component/osmotically‑inducible lipoprotein OsmE
	?	NC_000913	1821869 =	17 (0.270)					intergenic (‑250/+49)	chbB/osmE	N,N'‑diacetylchitobiose‑specific PTS enzyme IIB component/osmotically‑inducible lipoprotein OsmE

CGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGAC‑TTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTA‑‑TTTC‑TTTGACCTTAT‑AAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑A‑A‑AC‑CGGCGCAATGGCCGGTTT‑CCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACC‑GGAGTTGATGACATGTCCGGTATCATCT‑AACGCGACAAAGTAGG‑TTTCTGC‑TTTA‑CCATCACG‑TTGA‑CCCAGGATGTAGGTCTGG‑CAAGTACCGCGAGCATGGATCATGCTCACTTCAGACGAAGGTTTACCCGCAA‑TTTGTGCAACCT‑GCGCCCGGCTCATGCCTTTTTTGACGTCTTTCACCACAGGCTGTACAAACTGGTCTTTGGTACGATCATAAGCCGTACAACCCGCCAGCA  >  NC_000913/1821637‑1822207                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                                                                                     cgaTTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGACTTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTA‑‑TTTC‑TTTGACCTTAT‑AAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑A‑GAC‑‑‑‑‑GACAA‑A‑A‑AC‑CGGCGCAATGGCCGGTTT‑CCgtt                                                                                                                                                                                                                                                                                                                                        <  1:1173669/255‑1 (MQ=255)     tATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGAC‑TTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTA‑‑TTTC‑TTTGACCTTAT‑AAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑‑AATAATTCGCG‑AAG‑ATAATT‑AGAACTC‑AGGCC‑‑‑‑‑AAAAACAcggcgcaatggccggtttccgttgttactcaagctttcagacgaattattacttcgcagcctgtggatcagtgtcgtattcagcacaggtctgataaccggagttgatgacatgtccggtatcatctaacgcgcaagtaggtttctgctttaccatcacgttgacccaggatgtaggtctggcaagtaccgcgagcatggat                                                                                                                                                            >  1:347592‑M1/1‑224 (MQ=255)                                 ttAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGAC‑TTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTA‑‑TTTC‑TTTGACCTTATAAAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAA‑TC‑AGGCC‑‑‑‑‑AAAAA‑ACA‑AA‑CGGCGCAATGG‑CGG‑TT‑CCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACC‑GGAGTTGATGACATGTCCGGTATCATCT‑AACGCG‑CAAAGTAGG‑TTTCTGC‑TTTA‑c                                                                                                                                                                                              >  1:347595/1‑354 (MQ=255)                                                                                        gctgaaaaGGAGTATACGGTATAGACCTGAGCAATAGTAT‑TTTCTTTTGACCTTAT‑AAATTG‑TTTCTCCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑‑‑GCG‑‑‑‑‑ACAAA‑A‑A‑AC‑CGGCGCAATGGCCGGTTT‑CCGTTGTTACTCAAGCTTTCAGACg                                                                                                                                                                                                                                                                                                                    <  1:347599/186‑1 (MQ=255)                                                                                                      taCGGTATAGACCTGAGCAATAGTA‑‑TTTC‑TTTGACCTTAT‑AAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑‑AATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑Acggcgcaatggccggttt                                                                                                                                                                                                                                                                                                                                                    >  1:1173679‑M1/1‑128 (MQ=255)                                                                                                         ggTATAGACCTGAGCAATAGTA‑‑TTTCTTTTGACCTTAT‑AAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTCGACGAC‑‑‑‑‑AAAAA‑Ccggcgcaatggccggtttccgttgt                                                                                                                                                                                                                                                                                                                                             <  1:347602‑M1/153‑26 (MQ=255)                                                                                                            ataGACCTGAGCAATAGTA‑‑TTTC‑TTTGACCTTAT‑AAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑Acggcgcaatggccggtttccgttgttactcaagctttcagacgaattgattacttcgcagcctgtggatcagtgtcgtattcagcacaggtctgataaccggagttgatgacatgtccggtatcatct                                                                                                                                                                                                                                      >  1:1173681‑M1/1‑123 (MQ=255)                                                                                                            ataGACCTGAGCAATAGTA‑‑TTTC‑TTTGACCTTAT‑AAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑Acaggccgcaatggccggtttccgttgttactcaagctttcagacgaattgattacttcgcagcctgtggatcagtgtcgtattcagcacaggtctgataaccggagttgatgacatgtccggtatcatct                                                                                                                                                                                                                                    >  1:1173682‑M1/1‑123 (MQ=255)                                                                                                               gACCTGAGCAATAGTATTTTTCTTTTGACCTTATAAAATTGTTTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑‑‑GCG‑‑‑‑‑ACAAA‑A‑A‑AC‑CGGCGCAATGGCCGGTTTCCCGTTGTTACTCAAGCTTTCAGACg                                                                                                                                                                                                                                                                                                                    <  1:347603/170‑1 (MQ=255)                                                                                                                     aGCAATAGTA‑‑TTTC‑TTTGACCTTAT‑AAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCCA‑‑‑‑AAAAA‑A‑A‑AC‑CGGCGCAATGGCCGGTTT‑CCGTTGTTACTCAAGCTTTCa                                                                                                                                                                                                                                                                                                                        <  1:1173678/157‑1 (MQ=255)                                                                                                                          tAGTA‑‑TTTC‑TTTGACCTTAT‑AAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑Acggcgcaatggccggtttccgttgttactcaagctttcagacgaattgattacttcgcagcctgtggatcagtgtcgtattcagcacaggtctgataaccggagttgatgacatgtccggtatcatctaacgcgacaaagtaggtttctgcttttaccatcacgtttgacccaggatgtaggtctggcaagtaccgcgagca                                                                                                                                                            >  1:1173684‑M1/1‑109 (MQ=255)                                                                                                                          tAGTA‑‑TTTC‑TTTGACCTTAT‑AAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAAT‑ATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑‑AAAA‑Acggcgcaatggccggtttccgttgttactcaagctttcagacgaattgattacttcgcagcctgtggatcagtgtcgtattcagcacaggtctgata                                                                                                                                                                                                                                                                     >  1:1173683‑M1/1‑107 (MQ=255)                                                                                                                            gTA‑‑TTTC‑TTTGACCTTAT‑AAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑Acaggcgcaatggccggtttccgttgttactcaagctttcagacgaattgattacttcgcagcctgtggatcagtgtcgtattcagcacaggtctgataaccggagttgatgacatgtccggtatcatctaacgcgacaaagtaggtttctgctttaccatcaacgttgacccaggatgtaggtctggcaa                                                                                                                                                                        >  1:1173686‑M1/1‑107 (MQ=255)                                                                                                                            gTA‑‑TTTC‑TTTGACCTTAT‑AAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑‑AAAA‑Acggcgcaatggccggtttccgttgttactcaagctttcagacgaattgattacttcgcagcctgtggatcagtgtcgtattcagcacaggtctgataaccggagttgatgacatgtccggtatcatctaacgcgcaaagtaggtttctgctttaccatcacgttgacccaggatgtaggtctggcaagtaccgcgagcatggatcat                                                                                                                                                       >  1:1173685‑M1/1‑106 (MQ=255)                                                                                                                                 tttC‑TTTGACCTTAT‑AAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑Acggcgcaatggccggtttccgttgttactcaagctttcagacgaattgattacttcgcagcctgtggatcagtgtcgtattcagcacaggtctgataaccggagttgatgacatgtccggtatcatctaacgcgacaaagtaggtttctgctttaccatcacgtttgacccaggatgtaggtctggca                                                                                                                                                                          >  1:1173687‑M1/1‑104 (MQ=255)                                                                                                                                   tC‑TTTGACCTTAT‑AAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑Acggcgcatggccggttccgttgttactcaagctttcagacgaattgattacttcgcagcctgtggatcagtgtcgtattcagcacaggtctgataaccggagttgatgacatgt                                                                                                                                                                                                                                                    >  1:1173688‑M1/1‑102 (MQ=255)                                                                                                                                    c‑TTTGACCTTATAAAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑A‑A‑ACACGGCGCAATGGCCGGTTT‑CCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGGAGTTGATGACATGTCCGGTATCATCT‑AACGCGACAAAGTAGGTTTTCTGCTTTTACCCATCACGTTTGACCCCAGGATGTAGGTCTGG‑CAAGTACCGCGAGCATGGATCATGCTCACTTCAGACGAAGGTTTACCCGCAA‑TTTGTGCAACCT‑GCGCCCGGCTCATGCCTTTTTTGACGTCTTTCACCACAGGCTGTACAAACTGGTCTTTGGTACGATCATAAGCCGTACAACCCGCCAGCa  >  1:347604/1‑451 (MQ=255)                                                                                                                                               at‑aAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCCA‑‑‑‑AAAAA‑Acggcgcaatggccggtttccgttgttactcaagctttcagacgaattgattacttcgcagcctgtggatcagtgtcgtattcagcacaggtctgataaccggagttgatgacatgtccggtatcatctaacgcgacaaaagtaggtttctgctttaccatcacgttgacccaggatgtaggtctggcaagtaccgcgagcatggatcatgc                                                                                                                                                   >  1:1173691‑M1/1‑92 (MQ=255)                                                                                                                                                                cTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑‑AAAA‑A‑A‑AC‑CGGCGCAATGGCCGGTTT‑CCGTTGTTACTCAAGCTTTCAGACg                                                                                                                                                                                                                                                                                                                    <  1:1173689/122‑1 (MQ=255)                                                                                                                                                                        gtgGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATT‑AGAACTC‑AGGCC‑‑‑‑‑AAAAA‑A‑C‑A‑‑CGGCGCAATGGCCGGTTT‑CCGTTGTTACTCAAGCTTTCAGACG‑ATTGATT‑CTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACC‑GGAGTTGATGACATGTCCGGTATCATCT‑AACGCGAC‑AAGTAGG‑TTTCTGC‑TTTA‑CCATCACGTTTGA‑CCCAGGATGTAGGTCTGG‑CAAGTACCGCGAGCATGGATCATGCTCACTTCAGACG‑AGGTTTACCCGCAATTTTGTGCAACCT‑GCGCCCGGCTCATGCCTTTTTTGACGTCTTTCACCACAGGCTGTACAAACTGGTCTTTGGTACg                            >  1:347606/1‑381 (MQ=255)                                                                                                                                                                         tgGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑C‑A‑AA‑CGGCGCAATGGCCGG‑TT‑CCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACC‑GGAGTTGATGACATGTCCGGTATCATCT‑AACGCGACAAAGTAGG‑TTTCTGC‑TTTA‑CCATCACG‑TTGA‑CCCAGGATGTAGGTCTGG‑CAAGTACCGCGAGCATGGATCATGCTCACTTCAGACGAAGGTTTACCCGCAA‑TTTGTGCaa                                                                                                >  1:347608/1‑316 (MQ=255)                                                                                                                                                                         tgGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑A‑A‑ACACGGCGCAATGGCCGGTTT‑CCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACC‑GGAGTTGATGACATGTCCGGTATCATCT‑AACGCGACAAAGTAGG‑TTTCTGC‑TTTA‑CCATCACG‑TTGA‑CCCAGGATGTAGGTCTGG‑CAAGTACCGCGAGCATGGATCATGCTCACTTCAGACGAAGGTTTACCCGCAA‑TTTGTGCAACCT‑GCGCCCGGCTc                                                                                 >  1:347607/1‑332 (MQ=255)                                                                                                                                                                             tATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑A‑A‑AC‑CGGCGCAATGGCCGGTTT‑CCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACC‑GGAGTTGATGACATGTCCGGTATCATCT‑AACGCGACAAAGTAGG‑TTTCTGc                                                                                                                                                                                                     <  1:1173692/218‑1 (MQ=255)                                                                                                                                                                                       ttCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑A‑C‑AA‑CGGCGCAATGGCCGGTTT‑CCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACC‑GGAGTTGATGACATGTCCGGTATCATCT‑AACGCGACAAAGTAGG‑TTTCTGC‑TTTA‑CCATCACG‑TTGA‑CCCAGGATGTAGGTCTGG‑CAAGTACCGCGAGCATGGATCATGCTCACTTCAGa                                                                                                                           >  1:1173694/1‑277 (MQ=255)                                                                                                                                                                                         cacaTTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑Accggcgcaatggccggtttccgttgttactcaagctttcagacgaattgattacttcgcagcctgtggatcagtgtcg                                                                                                                                                                                                                                                                                        >  1:1173696‑M1/1‑52 (MQ=255)                                                                                                                                                                                          acaTTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑Acggcgcaatggccggtttccgttgttactcaagctttcagacgaattgattacttcgcagcctgtggatcagtgtcgtatttcagcacaggtctgataaccggagttgatgactgtccggtatcatctaacgcgcaaagtaggtttctgc                                                                                                                                                                                                                >  1:1173697‑M1/1‑51 (MQ=255)                                                                                                                                                                                             tttCGGGC‑AAATAATTCGCGAAAG‑ATAATTAAGAACTC‑AGGCCAAAAAAAAAA‑A‑A‑ACACGGCGCAATGGCCGGTTT‑CCGTTGTTACTCAAGCTTTCAGACGAATTGATT‑CTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACC‑GGAGTTGATGACATGTCCGGTATCATCT‑AACGCGAC‑AAGTAAG‑TTTCTGC‑TTTA‑CCATCACG‑TTGA‑CCCAGGATGTAGGTCTGG‑CAAGTACCGCGAGCATGGATCATGCTCACTTCAGACGAAGGTTTACCCGCAA‑TTTGTGCAACCT‑GCGCCCGGCTCATGCCTTTTTTGACGTCTTTCACCACAGGCTGTACAAAc                                          >  1:347609/1‑355 (MQ=255)                                                                                                                                                                                              ttCGGGC‑AAATAATTCGCG‑AAGAATAATTAAG‑ACTC‑AGGCCAA‑‑‑AAAAA‑A‑A‑AC‑CGGCGCAATGGCCGGTTT‑CCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACC‑GGAGTTGATGACATGTCCGGTATCATCTAAACGCGACAAAGTAGG‑TTTCTGC‑TTTA‑CCATCACG‑TTGA‑CCCAGGATGTAGGTCTGG‑CAAGTACCGCGAGCATGGATCATGCTCACTTCAGACGAAGGTTTACCCGCAA‑TTTGTGCa                                                                                                 <  1:1173693/298‑1 (MQ=255)                                                                                                                                                                                              ttCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAACAcggcgcaatggccggttccgttgttactcaagcttcagacgaattgattacttcgcagcctgtggatcagtgtcgtattcagcacaggtctgataaccggagttgatgacatgtccggtatcatctaacgcgacaaagtaggtttctgctttaccatcacgttgacccaggatgtaggtctggcaagtaccgcgagcatggatcatgctcacttcagacgaaggtttacccgcaatttgtgcaacctgcgcccggctcatgccttttttgacgtctttcaccacaggctgtacaaactggtctttggtacgatcataag                                       >  1:347611‑M1/1‑48 (MQ=255)                                                                                                                                                                                              ttCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑A‑ACAA‑CGGCGCAATGGCCGGTTT‑CCGTTGTTACTCAAGC‑TTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACC‑GGAGTTGATGACATGTCCGGTATCATCT‑AACGCG‑C‑AAGTAGG‑TTTCTGC‑TTTA‑CCATCACG‑TTGA‑CCCAGGATGTAGGTCTGG‑CAAGTACCGCGAGCATGGATCATGCTCACTTCAGACGAAGGTTTACCCGCAA‑TTTGTGCAACCTGGCGCCCGGCTCATGCCTTTTTTGACGTCTTTCACCACAgg                                                    >  1:347610/1‑338 (MQ=255)                                                                                                                                                                                                         taatTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑A‑C‑A‑‑CGGCGCAATGGCCGGTTT‑CCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACC‑GGAGTTGATGACATGTCCGGTATCATCT‑AACGCGACAAAGTAGG‑TTTCTGC‑TTTA‑CCATCACG‑TTGA‑CCCAGGATGTAGGTCTGGTCAAGTACCGCGAGCATGGATCATGCTCACTTCAGAc                                                                                                                          >  1:1173698/1‑261 (MQ=255)                                                                                                                                                                                                         taatTCGCG‑AAG‑ATAA‑TAAGAACTC‑‑‑GC‑‑‑‑‑‑‑AACA‑A‑A‑AC‑CGGCGCAATGGCCGGTTT‑CCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg                                                                                                                                                                                                                                                                                                      <  1:347612/92‑1 (MQ=255)                                                                                                                                                                                                          aatTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCCA‑‑‑‑AAAAA‑Acggcgcaatggccggtttccgttgttactcaagctttcagacgaattgattacttcgcagcctgtggatcagtgtcgtattcagcacaggtctgataaccggagttgatgacatgtccggtatcatctaacgcgacaaagtaggtttctgcttttaccatcacgtttgaccccaggatgtaggtctggcaagtaccgcgagcatggatcatgctcacttcagacgaaggtttacccgcaatttgtgcaacctgcgcccggctcat                                                                                             >  1:1173700‑M1/1‑37 (MQ=255)                                                                                                                                                                                                          aatTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑Acggcgcaatggccggtttccgttgttactcaagctttcagacgaattgattacttcgcagcctgtggatcagtgtcgtattcagcacaggtctgataaccggagttgatgacatgtccggtatcatctaacgcgacaaagtaggtttctgctttaccatcacgttgacccaggatgtaggtctggcaagtaccgcgagcatggatcatgctcacttcagacgaaggtttacccgcaattgtgcaacctgcgcccggctcatg                                                                                                >  1:1173699‑M1/1‑36 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                                                                                     CGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGAC‑TTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTA‑‑TTTC‑TTTGACCTTAT‑AAATTG‑TTTCT‑CCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGC‑AAATAATTCGCG‑AAG‑ATAATTAAGAACTC‑AGGCC‑‑‑‑‑AAAAA‑A‑A‑AC‑CGGCGCAATGGCCGGTTT‑CCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACC‑GGAGTTGATGACATGTCCGGTATCATCT‑AACGCGACAAAGTAGG‑TTTCTGC‑TTTA‑CCATCACG‑TTGA‑CCCAGGATGTAGGTCTGG‑CAAGTACCGCGAGCATGGATCATGCTCACTTCAGACGAAGGTTTACCCGCAA‑TTTGTGCAACCT‑GCGCCCGGCTCATGCCTTTTTTGACGTCTTTCACCACAGGCTGTACAAACTGGTCTTTGGTACGATCATAAGCCGTACAACCCGCCAGCA  >  NC_000913/1821637‑1822207

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.