New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1446721 =71 (1.140)26 (0.430) 23/376 1.3 29.9% coding (563/906 nt) feaR DNA‑binding transcriptional activator FeaR
?NC_000913 = 1570338 53 (0.880)coding (152/1536 nt) gadC L‑glutamate:4‑aminobutyrate antiporter

CGTGCCACCAAACTGCGTTAATGCCAGCGCCCAAAGAATGATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACCTGTCTGTACTGATGTAGCCATATTATCCCCCTAAAACGGTATTCCTGTCGGAACCGCACCTGTTTTGTTCTGAAGCGTATTCAGAACAATATTTTCCGTTGC  >  NC_000913/1570043‑1570570
                                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                 
gatgcCACCAAACTGCGTAATGCCAGCGCCCAAAGAATGGATGAGTGCTGCAATAGTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAAGTCCCACGGGAATAAACCATAAAAtcccgctgatgaagtaccgggcgc                                                                                                                                                                                                                           >  1:318558‑M2/3‑294 (MQ=255)
               cGTTAATGCCAGCGCCCAAAGAATGATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCGCCTAATAGCAGGAagaaga                                                                                                                                                                                                                         >  1:1134925/1‑303 (MQ=255)
                                                           ttGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAAtccgcctgatgaagtaccgggcgcagcagacacaccatcgc                                                                                                                                                                                                          <  1:318577‑M2/278‑42 (MQ=255)
                                                                                aGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAAtcccgctgatgaagtaccggccggcagcagacacaccatgcctgtagcgcagcttcacttctgtttcagaaa                                                                                                                                                                           <  1:1134945‑M2/288‑73 (MQ=255)
                                                                                  cgcTGGCCATTTCCAGGATGTAAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAAAACCAAGGCGATTTGCAGATAGCCAAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAAGTCCCACGGGAATAAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAAGCCCGATGTTGCGa                                                                                                                                                                                                <  1:318579/269‑1 (MQ=255)
                                                                                  cgcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATc                                                                                                                                                              <  1:318578/294‑1 (MQ=255)
                                                                                  cgcTGGCATTTCCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAAACCAAGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCtt                                                                                                              <  1:318575/340‑1 (MQ=255)
                                                                                           attCAGGATGTAGGAGAGTGCCCTAACACGAATAGAGCATCGGAATAAACCAATGGCGATTGCAGATAGCCAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGAt                                                                                                                                                                                                       <  1:318584/240‑1 (MQ=255)
                                                                                               cAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAAtcccgctgatgaagtaccgggcgcagcagacacaccatcgcctgtagcgcagcttcactttctgtttcaga                                                                                                                                                                            >  1:1134943‑M2/1‑203 (MQ=255)
                                                                                                     gTAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCGTCGACGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAAtcccgctgatgaagtaccgggcgcagcagacacaccatcgcctgtagcgcagcttcactttctgtttcaga                                                                                                                                                                            >  1:1134942‑M2/1‑194 (MQ=255)
                                                                                                           agagTGCCCCTAACACGAAATAGAGCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATa                                                                                                                                                                                <  1:1134946/255‑1 (MQ=255)
                                                                                                                        cacGAAATAGAGCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTAc                                                                                                                                                                  <  1:1134952/254‑1 (MQ=255)
                                                                                                                        cacGAAATAGAGCATCGGAATAAACAACTGGCGATTTGCAGATAGCCAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAGTCCCACGGGAATAAACCATAAAAtccgcctgatgaagtaccgggcggcagcagacacaccatgcctgtagcgcagcttcactttctgtttcagaaagtgccggattattcatgctctcctgtaacaggcgatgactgagttgcaccatgggtaa                                                                                                                <  1:318592‑M2/307‑132 (MQ=255)
                                                                                                                            aaaTAGAGCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAAt                                                                                                                                        >  1:1134955/1‑275 (MQ=255)
                                                                                                                                   gCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAAtcccgctgatgaagtaccgggcgcagcagacacaccatcgcctgt                                                                                                                                                                                                      >  1:318588‑M2/1‑168 (MQ=255)
                                                                                                                                   gCATCGGAATAAAACCAAGGCGATTTGCAGATAGCCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACctgtctgt                                                                                                   <  1:318589/305‑1 (MQ=255)
                                                                                                                                   gCATCGGAATAAACCAATGGCGAATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTaa                                                                                                                               <  1:318587/278‑1 (MQ=255)
                                                                                                                                        ggAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAAtccgcctgatgaagtaccgggcgcagcagacacaccatcgcctgtagcgcagcttcactttctgtttcagaaagtgccggattattcatgctctcctgtaacaggc                                                                                                                                         <  1:1134961‑M2/269‑107 (MQ=255)
                                                                                                                                              aaaCCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAg                                                                                                                                                                                                                                 >  1:1134962/1‑172 (MQ=255)
                                                                                                                                              aaaCCAATGGCGATTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATa                                                                                                                                                                                >  1:318594/1‑219 (MQ=255)
                                                                                                                                               aaCCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATa                                                                                                                                                                                <  1:1134954/219‑1 (MQ=255)
                                                                                                                                               aaCCAAGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACCACCACCTTCTTCCCAGCCGTCGAGGTGGCCATTTCCGCAGCACAAAGTCCCAGGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACctgtctg                                                                                                    <  1:318590/292‑1 (MQ=255)
                                                                                                                                                aCCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAAGTCCCACGGGAATAAACCATAAAAtcc                                                                                                                                                                                                                                                >  1:318591‑M2/1‑156 (MQ=255)
                                                                                                                                                       gcgattttGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTTGATACCCAGGCGAAGACACCACCTTCTTTCCCAGCCGTCGACGGTGGCCATTTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCGCCCTAAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTTACCAttcgaat                                                                                                                                                         >  1:318595/6‑233 (MQ=255)
                                                                                                                                                           aTTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCCGGCCCAGAGTATTTCGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGgaagaa                                                                                                                                                                                                                           <  1:1134957/167‑1 (MQ=255)
                                                                                                                                                                cAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGgaagaa                                                                                                                                                                                                                           <  1:1134958/161‑1 (MQ=255)
                                                                                                                                                                cAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAACCATaaaaatccc                                                                                                                                                                                                                                              <  1:1134959/143‑6 (MQ=255)
                                                                                                                                                                     aGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCGTCGACGGTGGCCATTTCCGCAGCACAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCa                                                                                                                                                                       >  1:318596/1‑205 (MQ=255)
                                                                                                                                                                               gagaTCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAAtcccgctgatgaagtaccgggcgcagcagacacaccatgcctgtagcgcagcttcacttttctgtttcagaaagtgccggattattcatgctctcctgtaacaggcgatgactgagttgcacca                                                                                                                       <  1:1134966‑M2/251‑125 (MQ=255)
                                                                                                                                                                               gagaTCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGa                                                                                                                                                            >  1:318597/1‑209 (MQ=255)
                                                                                                                                                                                 gaTCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGaagc                                                                                                                       >  1:1134968/1‑238 (MQ=255)
                                                                                                                                                                                              ccccATCTCGGCCCCAGAGTATTTGATACCCAGGGCGAAGACACCACCTTCTTCCCAGCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAAtcccgctgatgaagtaccgggcggcagcagacacaccatcgcctgtagcgcagcttcacttttctgtttcagaaagtgccggattattcatgctctcctgtaacaggcgatgactgagttgcaccatgggtaagtcagcgtccagtcttctgcgcagataggtttttgatggggaa                                                                   <  1:1134970‑M2/288‑177 (MQ=255)
                                                                                                                                                                                              ccccATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACTTCTTCCCAGCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACCTGTCTGTACTGATGTAGCCATATTATCCCCCTAAAACGGTATTCCTGTCGGAACCGCACCTGTTTTGTTCt                                 >  1:1134969/1‑311 (MQ=255)
                                                                                                                                                                                               caatcttcGGCCCCACGAGTATTTGATACCCCACGGCCGAAGACCACCACCCTTCTTTCCCAGCCGTCGAGGTGGCCATTTCCGCAGCACAAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGAATGTGAGCTGCTTAGCTTTACCTGTCTGTACTGATGTAGCCATATTATCCCCCTAAAACGGTATTCCTGTCGGACCGCACCTGTTTTTGTTCTGAAGCg                           <  1:318603/318‑1 (MQ=255)
                                                                                                                                                                                                  aTCTCGGCCCCAGAGTATTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGTGGCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATa                                                                                                                                                                                <  1:1134967/169‑1 (MQ=255)
                                                                                                                                                                                                     tcGGCCCCAGAGTATTTGATACCCCAGGCGAAGACACCACCTTCTTCCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCGCCACTAAGCAGGAAGAAGACTAATGaaa                                                                                                                                                                                                               >  1:318598/1‑139 (MQ=255)
                                                                                                                                                                                                      cGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACTTCTTCCCAGCCGTCGCGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACCTGTCTGTAc                                                                                                 >  1:1134971/1‑241 (MQ=255)
                                                                                                                                                                                                                        tGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAAtcccgctgatgaagtaccgggcgcagcagacacaccatcgcctgtagcgcagcttcacttctgtttcagaaagtgccggattattcatgctctcctgtaacaggcgatgactgagttgcaccatgggtaagtcagc                                                                                                           <  1:1134972‑M2/225‑137 (MQ=255)
                                                                                                                                                                                                                                  aGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAGTCCCACGGGAATAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACCTGTCTGTACTGATGTAGCCATATTATCCCCCTAAAAACGGTATCCTGTCGGAACCGCACTGTTTTGTTCTGAAGCg                           >  1:318600/1‑284 (MQ=255)
                                                                                                                                                                                                                                        gAAGACACCACTTCTTCCCAGCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTa                                                                                                            >  1:1134973/1‑203 (MQ=255)
                                                                                                                                                                                                                                           gaccaccacCTTCTTCCCAGCCGCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGc                                                                                                                                                <  1:318599/164‑1 (MQ=255)
                                                                                                                                                                                                                                                 caccTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAAtcccgctgatgaagtaccgggcgcagcagacacaccatcgcctgtagcgcagcttcacttctgtttcagaaagtgccggattattcatgctctcctgtaacaggcgatgactgagttgcaccatgggtaagtcagcgtccagtctttctgcgcagataggttttgatgg                                                                          <  1:939279‑M2/238‑170 (MQ=255)
                                                                                                                                                                                                                                                          ttcCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAAtcccgctgatgaagtaccggcgcagcagacacaccatcgcctgtagcgcagcttcacttctgtttcagaaagtgccggattattcatgctctcctgtaacaggcgatgactgagttgcaccatgggtaagtcagcgtccagtctttctgcgcagataggttttgatggggaaaatattgttccagcagagtgcgtggcaaagtaatgaaatctgtttagaagactcct               <  1:939283‑M2/290‑229 (MQ=255)
                                                                                                                                                                                                                                                           tcCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATaa                                                                                                                                                                               >  1:1134975/1‑126 (MQ=255)
                                                                                                                                                                                                                                                                     tCGACGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGc                                                                                                                                                                                                                                    <  1:1134974/65‑1 (MQ=255)
                                                                                                                                                                                                                                                                       gACGGTGGCCATTCCGCAGCACAAAGTCCCACGGGAATAACCATAAATCCCGCCAATAGCAGGAGAAGACTAATGAAAAGCCCGAGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTATGGCAAAGATCCAAGTAATGTGAGCTGCTTAGCTTTACCTGTCTGTACTGATGTa                                                                                          <  1:318601/188‑1 (MQ=255)
                                                                                                                                                                                                                                                                          ggTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAAtccgctgatgaagtaccgggcgcagcagacacaccatcgcctgtagcgcagcttcactttctgtttcagaaagtgccggattattcatgctctcctgtaacaggcgatgactgagttgcaccatgggtaagtcagcgtccagtctttctgcgcagataggttttgatggggaaaatattgttccagcagagtgcgtggcaaagtaatgaaatctgttt                         <  1:173555‑M2/265‑219 (MQ=255)
                                                                                                                                                                                                                                                                                     tCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACCTGTCTGTACTGATGTAGCCATATTATCCCCCTAAAACGGTATTCCTGTCGGAACCGCACCTGTTTTGTTCTGAAGc                            >  1:1134985/1‑243 (MQ=255)
                                                                                                                                                                                                                                                                                         cagcaCAAAGTCCCACGGGAATAAACCATAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCtt                                                                                                              <  1:318602/158‑1 (MQ=255)
                                                                                                                                                                                                                                                                                             acaAAGTCCCACGGGAATAAACCATAAAAtcccgctgatgaagtaccgggcgcagcagacacaccatcgcctgtagcgcagcttcactttctgtttcagaaagtgccggattattcatgctctcctgtaacaggcgatgactgagttgcaccatgggtaagtcagcgtccagtctttctgcgcagataggttttt                                                                             >  1:939296‑M2/1‑29 (MQ=255)
                                                                                                                                                                                                                                                                                             acaAAGTCCCACGGGAATAAACCATAAAAtcccgctgatgaagtaccgggcgcagcagacacaccatcgcctgtagcgcagcttcactttctgtttcagaaaagtgccggattattcatgctctcctgtaacaggcgatgactgagttgcaccatgggtaagtcagcgtccagtctttctgcgcagataggttttt                                                                            >  1:939301‑M2/1‑29 (MQ=255)
                                                                                                                                                                                                                                                                                                aaaGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACctgtctg                                                                                                    <  1:1134980/163‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                 aaGTCCCACGGGAATAAACCATAAAAtcccgctgatgaagtaccgggcgcagcagacacaccatcgcctgtagcgcagcttcacttttctgtttcagaaagtgccggattattcatgctctcctgtaacaggcgatgactgagttgcaccatgggtaagtcagcgtccagtctttctgcgcagataggttttgatggggaaaatattgttccagcagagtgcgtggcaaaagtaatgaaa                             <  1:939289‑M2/240‑215 (MQ=255)
                                                                                                                                                                                                                                                                                                 aaGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACctgtctg                                                                                                    <  1:1134978/162‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                  aGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATg                                                                                                                                                                                                                   <  1:1134982/55‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                   taccccaggGAAATCAAACCATAAAAtcccgcgtgatgaagtacgggcgccagcagacacaccacgcctgtagcgcagcttcactttctgtttcagaaagtgcgatattcatgctctcctgtaacaggcgatgactgagttgcaccatgggtaagtcagcgtccagtctttctgcgcagatgttttttgatggggaaaaatattgttccagcagagtgcgtggcaaaagtaatgaaatctgtttagaagactcctgccagtaaagcg  >  1:173564‑M2/4‑26 (MQ=255)
                                                                                                                                                                                                                                                                                                    gTCCCACGGGAATAAACCATAAAAtcccgctgatgaagtaccgggcgcagcagacacac                                                                                                                                                                                                                >  1:939299‑M2/1‑24 (MQ=255)
                                                                                                                                                                                                                                                                                                    gTCCCACGGGAATAAACCATAAAAtcccgctgatgaagt                                                                                                                                                                                                                                    >  1:1134977‑M2/1‑24 (MQ=255)
                                                                                                                                                                                                                                                                                                    gTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATc                                                                                                                                                              <  1:1134983/104‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                    gTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGt                                                                                                                                                      <  1:1134976/112‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                    gTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAgctgc                                                                                                                     <  1:1134981/143‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                    gTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACCTGTCTGTACTGATGTAGCCAtatta                                                                                 <  1:1134979/179‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                           ggaaatcaaaccataaaAtcccgcctgatgaagtaccgggcgcagcagacacaccacgcctgtagcgcagcttcacttttctgtttcagaaagtgccggatattcatgctctcctgtaaacaggcgatgactgagttgcaccatgggtaagtcagcgtccagtctt                                                                                               >  1:173563‑M2/8‑18 (MQ=255)
                                                                                                                                                                                                                                                                                                            ggAATAAACCATAAAAtcccgctgatgaagtaccgggcgcag                                                                                                                                                                                                                         >  1:939300‑M2/1‑16 (MQ=255)
                                                                                                                                                                                                                                                                                                            ggAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATCATAAACAGCCCATTACATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACCTGTCTGTACTGATGTAGCCATATTATCCCCCTaa                                                                       <  1:1134984/179‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                             gAATAAACCATAAAAtcccgctgatgaagtaccgggcgcagcagacacaccatcgcctgtagcgcagcttcactttctgtttcagaagtgccggattattcatgctctcctgtaacaggcgatgactgagttgcaccatggggtaagtcagcgtccagtctttctgcgcagataggttttt                                                                             >  1:939305‑M2/1‑15 (MQ=255)
                                                                                                                                                                                                                                                                                                             gAATAAACCATAAAAtcccgctgatgaagtaaccgggcgcagcagacacaccatcgcctgtagcgcagcttcactttctgtttcagaaagtgccggattattcatgctctcctgtaacaggcgatgactgagttgcaccatgggtaagtcagcggtccagtctttctgcg                                                                                        <  1:173561‑M2/170‑156 (MQ=255)
                                                                                                                                                                                                                                                                                                              aaTAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCtt                                                                                                                   <  1:318604/135‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                               aTAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAAGAATCCAAGTAAATGTGAGCTGCTTAGCTTTACctgtctgt                                                                                                   <  1:318605/153‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                                  aaaCCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACCTGTCTGTACTGATGTAGCCATATTATCCCCCTAAAACGGTATTCCTGTCGGAACCGCACCTGTTTTGTCTGAAGCGTATTCAGAACAATATTTTCCGtt    >  1:1134990/1‑240 (MQ=255)
                                                                                                                                                                                                                                                                                                                   taacATAAAATCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCtt                                                                                                              >  1:318608/4‑135 (MQ=255)
                                                                                                                                                                                                                                                                                                                   aaCCATAAAAtcccgctgatgaagtaccgggcgcagcagacacaccatcgcctgtagcgcagcttcacttctgtttcagaaagtgccggattattcatgctctcctgtaacaggcgatgactgagttgcacatggtaagtcaggcgtccagtcttctgcgcagataggttttgatggggaaaatattgttccagcagagtg                                                    <  1:939291‑M2/201‑192 (MQ=255)
                                                                                                                                                                                                                                                                                                                   aaCCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGaa                                                                                                                                                                                               <  1:1134986/59‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                                   aaCCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACCTGTCTGTACTGATGTAGCCATATTATCCCCCTAAAACGGTATTccct                                                          >  1:1134991/1‑185 (MQ=255)
                                                                                                                                                                                                                                                                                                                     ccATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACCTGTCTGTACTGATGTAGCCATATTATCCCCCTAAAACGGTATCCTGTCGGAAcc                                                  >  1:318609/1‑192 (MQ=255)
                                                                                                                                                                                                                                                                                                                        tAAAAtcccgctgatgaagtaccgggcgcagcagacacaccatcgcctgtagcgcagcttcactttctgtttcagagtgcggatattcatgctcatcctgtaacaggcgatgactgagttgcaccatgggtaagtcagcgtccagtctttctgcgcagataggtttttgatggggaaaa                                                                     >  1:939298‑M2/1‑5 (MQ=255)
                                                                                                                                                                                                                                                                                                                        aaaaaTCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACCTGTCTGTACTGATGTAGcc                                                                                       >  1:318610/2‑154 (MQ=255)
                                                                                                                                                                                                                                                                                                                         aaaaTCCCGCCTAATAGCAGGAAGAAGACTAAATGAAAGCCCGATg                                                                                                                                                                                                      >  1:318611/1‑46 (MQ=255)
                                                                                                                                                                                                                                                                                                                          aaaTCCCGCCTAATAGCGAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATa                                                                                                                                                                                <  1:318607/68‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                                          aaaTCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTa                                                                                                                                <  1:1134988/111‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                                          aaaTCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACCTGTCTGTACTGATGTAGCCAtatta                                                                                 <  1:1134987/158‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                 
CGTGCCACCAAACTGCGTTAATGCCAGCGCCCAAAGAATGATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAGACACCACCTTCTTCCCAGCCGTCGACGGTGGCCATTTCCGCAGCACAAAGTCCCACGGGAATAAACCATAAAATCCCGCCTAATAGCAGGAAGAAGACTAATGAAAAGCCCGATGTTGCGAAGGTAGGGTATTCATAAACAGCCATTACCATCGATGCCGTTATGGCAAAGAATCCAAGTAATGTGAGCTGCTTAGCTTTACCTGTCTGTACTGATGTAGCCATATTATCCCCCTAAAACGGTATTCCTGTCGGAACCGCACCTGTTTTGTTCTGAAGCGTATTCAGAACAATATTTTCCGTTGC  >  NC_000913/1570043‑1570570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.