Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	287416	287829	414	15 [12]	[12] 13	yagH	CP4‑6 prophage; putative xylosidase/arabinosidase

CCGATGGGCAACGGCGGGTTTGACCCGTCCCTGTTCCACGACGACGATGGCCGCAAATACTATATCTACCGCCCGTGGGGGCCGCGCCACCACAGCAACCCGCACAACACCATCGTGTTACAGGCG‑TTTGACCCGCAGACCGGCACGCTCTCGCCCGAGCGCAAAACGCTGTTTACCGGCACG‑CCGCTCTGCTACA‑CCGAAGGCGCGCACCTGTATCGCCACGC‑GGGATGGTACTACCTGATGGCCG‑CCGAGGGCGGCACCAGCTACGAGCACGCCGTCGTGGTGCTGCGTTCCAAAAATATCGACGGGCCGTACGAGCTGCACCCGGACGTAACGATGATGACCAGCTGGCACCTGCCGGAGAACCCGCTGCAGAAGAGCGGCCACGGCTCGCTGCTGCAGACGCATACGGGTGAATGGTACATGGCCTACCTCA  >  NC_000913/287146‑287581                                                                                                                                                                                                                                                                                   |                                                                                                                                                                       ccGATGGGCAACGGCGGGTTTGACCCGTCCCTGTTCCACGACG‑CGATGGCCGCAAATACTATATCTACCGCCCGTGGGGGCCGCGCCACCACAGCAACCCGCACAACACCATCGTGTTACAGGCG‑‑TTGACCCGCAGACCGGCACGCTCTCGCCCGAGCGCAAAACGCTGTTTACCGGCACG‑CCGCTCTGCTACA‑CCGAAGGCGCGCACCTGTATCGCCACGC‑GGGATGGTACTACCTGATGGCCG‑CCGAGGGCGGCACCAGCTACGAg                                                                                                                                                                        >  1:746789/1‑268 (MQ=255)                          cGTCCCTGTTCCACGACGACGATGGCCGCAAATACTATATCTACCGCCCGTGGGGGCCGCGCCACCACAGCAACCCGCACAACACCATCGTGTTACAGGCG‑TTTGACCCGCAGACCGGCACGCTCTCGCCCGAGCGCAAAACGCTGTTTACCGGCACG‑CCGCTCTGCTACA‑CCGAAGGCGCGCACCTGTATCGCCACGC‑GGGATGGTACTACCTGATGGCCG‑CCGAGGGCGGCACCAGCTACGAg                                                                                                                                                                        <  1:746791/245‑1 (MQ=255)                          cGTCCCTGTTCCACGACGACGATGGCCGCAAATACTATATCTACCGCCCGTGGGGGCCGCGCCACCACAGCAACCCGCACAACACCATCGTGTTACAGGCG‑TTTGACCCGCAGACCGGCACGCTCTCGCCCGAGCGCAAAACGCTGTTTACCGGCACG‑CCGCTCTGCTACA‑CCGAAGGCGCGCACCTGTATCGCCACGC‑GGGATGGTACTACCTGATGGCCG‑CCGAGGGC‑GCACCAGCTACGAg                                                                                                                                                                        <  1:746790/244‑1 (MQ=255)                                                                 tCTACCGCCCGTGGGGGCCGCGCCACCACAGCAACCCGCACAACACCATCGTGTTACAGGCGTTTTGACCCGCAGACCGGCACGCTCTCGCCCGAGCGCAAAACGCTGTTTACCGGCACGCCCGCTCTGCTACACCCGAAGGCGCGCACCTGTATCGCCACGC‑GGGATGGTACTACCTGATGGCCGCCCGAGGGCGGCACCAGCTACGAGCACGCCGTCGTGGTGCTGCGTTCCAAAAATATCGACGGGCCGTACGAGc                                                                                                                       >  1:746796/1‑259 (MQ=255)                                                                                                       cacaACACCATCGTGTTACAGGCG‑TTTGACCCGCAGACCGGCACGCTCTCGCCCGAGCGCAAAACGCTGTTTACCGGCACG‑CCGCTCTGCTACA‑CCGAAGGCGCGCACCTGTATCGCCACGC‑GGGATGGTACTACCTGATGGCCG‑CCGA‑GGCGGCACCAGCTACGAGCACGCCGTCGTGGTGCTGCGTTCCAAAAATATCGACGGGCCGTACGAGCTGCACCCGGACGTAACGATGATGACCAGCTGGCACCTGCCGGAGAAcc                                                                       <  1:746797/264‑1 (MQ=255)                                                                                                                                 ttGACCCGCAGACCGGCACGCTCTCGCCCGAGCGCAAAACGCTGTTTACCGGCACG‑CCGCTCTGCTACA‑CCGAAGGCGCGCACCTGTATCGCCACGCGGGGATGGTACTACCTGATGGCCG‑CCGAGGGCGGCACCAGCTACGAGCACGc                                                                                                                                                                   >  1:30655/1‑149 (MQ=255)                                                                                                                                  tGACCCGCAGACCGGCACGCTCTCGCCCGAGCGC‑AAACGCTGTTTACCGGCACG‑CCGCTCTGCTACA‑CCGAAGGCGCGCACCTGTATCGCCACGC‑GGGATGGTACTACCTGATGGCCG‑CCGAGGGCGGCACCAGCTACGAGCACGc                                                                                                                                                                   >  1:30656/1‑146 (MQ=255)                                                                                                                                                     ctctCGCCCGAGCGCAAAACGCTGTTTACCGGCACG‑CCGCTCTGCTACA‑CCGAAGGCGCGCACCTGTATCGCCACGC‑GGGATGGTACTACCTGATGGCCG‑CCGAGGGCGGCACCAGCTACGAGCACGCCGTCGTGGTGCTGCGTTCCAAAAATATCGACGGGCCGTACGAGCTGCACCCGGACGTAACGATGATGACCAGCTGGCACCTGCCGGAGAACCCGCTGCa                                                                >  1:746801/1‑227 (MQ=255)                                                                                                                                                           cccGAGCGC‑AAACGCTGTTTACCGGCACG‑CCGCTCTGCTACA‑CCGAAGGCGCGCACCTGTATCGCCACGC‑GGGATGGTACTACCTGA‑GGCCG‑CCGA‑GGCGGCACCAGCTACGAGCACGCCGTCGTGGTGCTGCGTTCCAAAAATATCGACGGGCCGTACGAGCTGCACCCGGACGTAACGATGATGACCAGCT‑GCACCTGCCGGAGAACCCGCTGCAGAAGAGCGGCCACGGCTCGCTGCTGCAGACGCATACGGGTGAATGGTACATg            <  1:746799/269‑1 (MQ=255)                                                                                                                                                           cccGAGCGC‑AAACGCTGTTTACCGGCACG‑CCGCTCTGCTACA‑CCG‑AGGCGCGCACCTGTATCGCCACGC‑GGGATGGTACTACCTGATGGCCG‑CCGA‑GGCGGCACCAGCTACGAGCACGCCG‑CGTGGTGCTGCGTTCCAAAAATATCGACGGGCCGTACGAGCTGCACCCGGACGTAACGATGATGACCAGCT‑GCACCTGCCGGAGAACCCGCTGCAGAAGAGCGGCCACGGCTCGCTGCTGCAGACGCATACGGGTGAATGGTACATg            <  1:746798/268‑1 (MQ=255)                                                                                                                                                                 cgcAAAACGCTG‑TTACCGGCACG‑CCGCTCTGCTACA‑CCG‑AGGCGCGCACCTGTATCGCCACGC‑GGGATGGTACTACCTGA‑GGCCG‑CCGAGGGC‑GCACCAGCTACGAGCACGCCG‑CGTGGTGCTGCGTTCC‑AAAATATCGACGGGCCGTACGAGCTGCACCCGGACGTAACGATGATGACCAGCTGGCACCTGCCGGAGAACCCGCTGCAGAAGAGCGGCCACGGCTCGCTGCTGCAGACGCATACGGGTGAATGGt                 <  1:746800/256‑1 (MQ=255)                                                                                                                                                                    caaaCGCTGTTTACCGGCACG‑CCGCTCTGCTACA‑CCGAAGGCGCGCACCTGTATCGCCACGC‑GGGATGGTACTACCTGATGGCCG‑CCGAGGGCGGCACCAGCTACGAGc                                                                                                                                                                       >  1:30658/2‑109 (MQ=255)                                                                                                                                                                                   ggCACG‑CCGCTCTGCTACA‑CCGAAGGCGCGCACCTGTATCGCCACGC‑GGGATGGTACTACCTGATGGCCG‑CCGAGGGCGGCACCAGCTACGAGCACGCCGTCGTGGTGCTGCGTTCCAAAAATATCGACGGGCCGTACGAGCTGCACCCGGACGTAACGATGATGACCAGCT‑GCACCTGCCGGAGAACCCGCTGCagaag                                                            <  1:746802/200‑1 (MQ=255)                                                                                                                                                                                            gcTCTGCTACA‑CCGAAGGCGCGCACCTGTATCGCCACGC‑GGGATGGTACTACCTGATGGCCG‑CCGAGGGCGGCACCAGCTACGAGCACGCCGTCGTGGTGCTGCGTTCCAAAAATATCGACGGGCCGTACGAGCTGCACCCGGACGTAACGATGATGACCAGCTGGCACCTGCCGGAGAACCCGCTGCAGAAGAGCGGCCACGGCTCGCTGCTGCAGACGCATACGGGTGAATGGTACATGGCCTACCTCa  >  1:746803/1‑251 (MQ=255)                                                                                                                                                                                                                                                                               aCGAGCACGCCGTCGTGGTGCTGCGTTCCAAAAATATCGACGGGCCGTACGAGCTGCACCCGGACGTAACGATGATGACCAGCTGGCACCTGCCGGAGAACCCGCTGCAGAAGAGCGGCCACGGCTCGCTGCTGCa                                     <  1:746804/136‑1 (MQ=255)                                                                                                                                                                                                                                                                                   |                                                                                                                                                                       CCGATGGGCAACGGCGGGTTTGACCCGTCCCTGTTCCACGACGACGATGGCCGCAAATACTATATCTACCGCCCGTGGGGGCCGCGCCACCACAGCAACCCGCACAACACCATCGTGTTACAGGCG‑TTTGACCCGCAGACCGGCACGCTCTCGCCCGAGCGCAAAACGCTGTTTACCGGCACG‑CCGCTCTGCTACA‑CCGAAGGCGCGCACCTGTATCGCCACGC‑GGGATGGTACTACCTGATGGCCG‑CCGAGGGCGGCACCAGCTACGAGCACGCCGTCGTGGTGCTGCGTTCCAAAAATATCGACGGGCCGTACGAGCTGCACCCGGACGTAACGATGATGACCAGCTGGCACCTGCCGGAGAACCCGCTGCAGAAGAGCGGCCACGGCTCGCTGCTGCAGACGCATACGGGTGAATGGTACATGGCCTACCTCA  >  NC_000913/287146‑287581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑