Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	523679	524053	375	13 [12]	[12] 13	rhsD	protein RhsD

AGGTGCTGCCCGGCGAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCG‑‑‑‑‑TTTTCGGCCCC‑GGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTC‑AACGACAACGGCGGGC‑GGAGCATTCACTTTGAGCCGCTGCTGCC‑GGGGGAGGCGGTGTACAGCCGC‑‑AGT‑GAGTCAA‑‑TGTGG‑CTGGTGCGC‑GGT‑GGTAAGGCAGCACAGCCGGACGGCCATACGCTGGCGCGGCTGTGGGGGGCGCTGCC‑GCCGGATATCCGGTTAAGCCCGCATCTTTACCTGGCGACCAACAGCGCACAGGGGCCGTGGTGGATACTGGGGTGGTCTG  >  NC_000913/523427‑523828                                                                                                                                                                                                                                                                          |                                                                                                                                                           aGGTGCTGCCCGGCGAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCG‑‑‑‑‑TTTTCGGCCCC‑GGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAAACGACAACGGCGGGC‑GGAGCATTCACTTTGAGCCGCTGCTGCC‑GGGGGAGGCGGTGTACAGCCGC‑‑AGT‑GAGTCAA‑‑TGTGG‑CTGGTGCGC‑GGT‑GGTAAGGCAGCACAGCC‑GACGGCCa                                                                                                                 <  1:804342/292‑1 (MQ=255)               gagaCGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCG‑‑‑‑‑TTTTCGGCCCC‑GGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAAACGACAACGGCGGGC‑GGAGCATTCACTTTGAGCCGCTGCTGCC‑GGGGGAGGCGGTGTACAGCCGC‑‑AGT‑GAGTCAA‑‑TGTGG‑CTGGTGCGC‑GGT‑GGTAAGGCAGCACAGCCGGACGGCCATACGCTGGCGCGGCtg                                                                                                 <  1:72613/295‑1 (MQ=255)                      aCCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGT‑‑‑‑TTTTCGGCCCC‑GGCTGGAAAGCGCC‑TCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTC‑AACG‑CAACGGCGGGCGGGAGCATTCACTTTGAGCCGCTGCTGCCGGGGGGAGGCGGTGTACAGCCGC‑‑AGT‑GAGTCAA‑‑TGTGG‑CTGGTGCGC‑GGT‑GGTAAGGCAGCACAGCCGGACGGCCATACGCTGgc                                                                                                        >  1:72616/1‑281 (MQ=255)                            cgcTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCG‑‑‑‑‑TTTTCGG‑CCC‑GGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTC‑AACG‑CAACGGCGGGC‑GGAGCATTCAC‑TTGAGCCGCTGCTGCC‑‑GGGGA‑GCGGTGTACAGCCGC‑‑AGT‑GAGTCAA‑‑TGTGG‑CTGGTGCGC‑GGT‑GGTAAGgca                                                                                                                                  >  1:804344/1‑243 (MQ=37)                               tGCCCGGCCCGCCTGCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCG‑‑‑‑‑‑TTTCGGCCCCGGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTC‑AACGACAACGGCGGGC‑GGAGCATTCACTTTGAGCCGCTGCTGCC‑GGGGGAGGCGGTGTACAGCCGC‑‑AGT‑GAGTCAA‑‑TGTGG‑CTGGTGCGC‑GGT‑GGTAAGGCAGCACAGCCGGACGGCCATACGCTGGCGCGGCTGTGGGGGGCGCTGCC‑GCCGGATATCCGGTTAAGCCCGCATCTTTACCTGGCGACCAACAGCGCACAGGGGCCGTGGTGGATACTGGGGTGGTCTg  <  1:72615/372‑1 (MQ=255)                                                  cATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTTTTTTCGGCCCC‑GGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTC‑AACGACAACGGCGGGC‑GGAGCATTCACTTTGAGCCGCTGCTGCCGGGGGGAGGCGGTGTACAGCCGC‑‑AGTCGAGTCAA‑‑TGTGG‑CTGGTGCGC‑GGT‑GGTAAGGCAGCACAGCCGGACGGCCATACGCTGGCGCGGCTGT‑GGGGGCGCTGCC‑GGCCGatgt                                                                         >  1:804347/1‑286 (MQ=38)                                                      ctctcCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCG‑‑‑‑‑TTTTCGGCCCC‑GGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTC‑AACGACAACGGCGGGC‑GGAGCATTCACTTTGAGCCGCTGCTGCC‑GGGGGAGGCGGTGTACAGCCGCG‑AGT‑GAGTCAA‑‑tgt                                                                                                                                                            >  1:804350/1‑200 (MQ=255)                                                           ccGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTT‑‑‑TTTTCGGCCCC‑GGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTC‑AACGACAACGGCGGGC‑GGAGCATTCACTTTGAGCCGCTGCTGCC‑GGGGGAGGCGGTGTACAGCCGC‑‑AGT‑GAGTCAA‑‑TGTGG‑CTGGTGCGC‑GGT‑GGTAAGGCAGCACAGCCGGACGGc                                                                                                                   >  1:72619/1‑234 (MQ=255)                                                                                     aGACGCCTGCACCGGTGGGCG‑‑‑‑‑TTTTTCGGCCC‑GGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTC‑AACGACAACGGCGGGC‑GGAGCATTCAC‑TTGAGCCGCTGCTGCC‑GGGGGA‑GCGGTGTACAGCCGCCGAGT‑GAGTCAAACTGTGGCCTGGTGCGCTGGTGGGTAAGGCAGCACAGCCGGACGGCCATACGCTGGCGCGGCTGT‑GGGGGCGCTGCC‑G‑CGGATATCCGGT‑‑AGCCCGCATCTTTACCTg                                                >  1:804352/1‑273 (MQ=255)                                                                                                          ggcgtttttCGGCCCC‑GGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTC‑AACGACAACGGCGGGC‑GGAGCATTCACTTTGAGCCGCTGCTGCC‑GGGGGAGGCGGTGTACAGCCGC‑‑AGT‑GAGTCAA‑‑TGTGG‑CTGGTGCGC‑GGT‑GGTAAGGCAGCACAGCCGGACGGCCATACGCTGGCGCGGCTGTGGGGGGCGCTGCC‑GCCGGATATCCGGTTAAGCCCGCa                                                          >  1:804353/6‑246 (MQ=255)                                                                                                                     gCCCC‑GGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTC‑AACG‑CAACGGCGGGC‑GGAGCATTCAC‑TTGAGCCGCTGCTGCC‑GGGGGAGGCGGTGTACAGCCGC‑‑AGT‑GAGTCAA‑‑TGTGG‑CTGGTGCGC‑GGT‑GGTAAGGCAGCACAGCCGGACGGCCATACGCTGGCGCGGCTGT‑GGGGGCGCTGCC‑GCCGGATATCCGGTTAAGCCCGCATCttt                                                     <  1:72620/237‑1 (MQ=255)                                                                                                                             cTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTC‑AACGACAACGGCGGGC‑GGAGCATTCACTTTGAGCCGCTGCTGCC‑GGGGGAGGCGGTGTACAGCCGC‑‑AGT‑GAGTCAA‑‑TGTGG‑CTGGTGCGC‑GGT‑GGTAAGGCAGCACAGCCGGACGGCCAT‑CGCTGGCGCGGCTGTGGGGGGCGCTGCCGGCCGGATATCCGGTT‑AGCCCGCATCTTTACCTGGCG‑CC‑ACAGCGCACAGGGGCCGTGGTGGATAcgtcggg        >  1:804355/1‑269 (MQ=255)                                                                                                                                                           gCTACGTGATGACGGACTGATACTC‑AACGACAACGGCGGGC‑GGAGCATTCACTTTGAGCCGCTGCTGCC‑GGGGGAGGCGGTGTACAGCCGC‑‑AGT‑GAGTCAA‑‑TGTGG‑CTGGTGCGC‑GGT‑GGTAAGGCAGCACAGCCGGACGGCCATACGCTGGCGCGGCTGTGGGGGGCGCTGCC‑GCCGGATATCCGGTTAAGCCCGCATCTTTACCTGGCGACCAACa                                      <  1:804356/218‑1 (MQ=255)                                                                                                                                                                                                                                                                          |                                                                                                                                                           AGGTGCTGCCCGGCGAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCG‑‑‑‑‑TTTTCGGCCCC‑GGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTC‑AACGACAACGGCGGGC‑GGAGCATTCACTTTGAGCCGCTGCTGCC‑GGGGGAGGCGGTGTACAGCCGC‑‑AGT‑GAGTCAA‑‑TGTGG‑CTGGTGCGC‑GGT‑GGTAAGGCAGCACAGCCGGACGGCCATACGCTGGCGCGGCTGTGGGGGGCGCTGCC‑GCCGGATATCCGGTTAAGCCCGCATCTTTACCTGGCGACCAACAGCGCACAGGGGCCGTGGTGGATACTGGGGTGGTCTG  >  NC_000913/523427‑523828

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑