| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3098653 | 38 (0.860) | 13 (0.290) +TTT |
11/356 | 3.0 | 25.0% | coding (913/1008 nt) | yggM | DUF1202 domain‑containing protein YggM |
| ? | NC_000913 | 3098654 = | 40 (0.880) | coding (912/1008 nt) | yggM | DUF1202 domain‑containing protein YggM | |||||
TTTAAATTCGCTGCTGGAGC‑TTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGT‑GGCAGCGG‑TTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCA‑GACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAAC‑TTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATC‑TTTTTTCCAGCG‑TTCATTAGCTTGGTTGATATCGTCAATTTTCATCAAAA‑TCGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3098367‑3098653‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTACTGTTTATTTCTGAAACTTTCATCG‑TTAACGGATA‑TTGCCC‑TTTTTCGAGCG‑TTACCCAGTCATCCTGCAATTTACGGCTAAGTTTTTGTGATTGCAGAAAAGTCTGTCGCCGTTGTTCGTTGATATCGAAATCTCGTTTCTGCTGAATCGGCACTTCATAACACTCTTCACTCTGTTTATGACATGCCGCAATCGCCGGTTGATAAACCTCTTTGTCATATTTAACCGCGAACGCCTCGCTATCGTTCTGTTTATTAAACTCATCAC‑GCTGT > NC_000913/3098654‑3098933 ||||||||| TTTAAATTCGCTGCTGGAGCTTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGT‑GGCAGCGGTTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCA‑GACGTTGATTGCC‑GATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAAC‑TTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATC‑TTTTTTCCAGCGTTTCATTAGCTTGGTTGATATCGTCAATTTTCATCAAAATTCGCGAC‑‑‑‑‑‑TTTTTTT > 1:1003059/1‑297 ACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGGCAGCGG‑TTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGGACGTTGATTGCCGGATGCGGGGTC‑ACGCCGCATCCTGCTACAAATCGTGCACTATATCAAAC‑TTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATC‑TTTTTTCCAGCG‑TTCATTAGCTTGGTTGATATCGTCAATTTTCATCAAAA‑TCGCGAC‑‑‑‑‑‑TTTTT < 1:747714/256‑1 ATAAGACGCGCAAGCGTCGCATCA‑GACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAAC‑TTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATC‑‑TTTTTCCAGCG‑TTCATTAGCTTGGTTGATATCGTCAATTTTCATCAAAA‑TCGCGA‑‑‑‑‑‑‑TCTTTTTTTACT > 1:747724/1‑194 GCGCAAGCGTCGCATCA‑GACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATC‑TTTTTTCCAGCGTTTCATTAGCTTGGTTGATATCGTCAATTTTCATCAAAA‑TCGCGAC‑‑‑‑‑‑TTTTTTTTTACTGTTTATTTCTGAAACTTTCATCG‑TTAACGGATATTTGCCC‑TTTT > 1:988513/1‑235 CCGCATCCTGCTACAAATCGTGCACTATATCAAAC‑TTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATC‑TTTTTTCCAGCG‑TTCATTAGCTTGGTTGATATCGTCAATTTTCATCAAAA‑TCGCGAC‑‑‑‑‑‑TTTTTTTTTACTGTTTATTTCTG‑AACTTTCATCGTTTAACGGA > 1:977541/1‑174 ATATCAAAC‑TTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATC‑TTTTTTCCAGCG‑TTCATTAGCTTGGTTGATATCGTCAATTTTCATCAAAA‑TCGCGACTTTTTTTTTTTTTTTACTGTTTATTTCTGAAACTTTCATCG‑TTAACGGATA‑TTGCCC‑TTTTTCGAGCG‑TTACCCAGTCATCCTGCAATTTACGGCTAAGTTTTTGTGATTGCAGAAAAGTCTGTCGCCGTTGTTCGTTGATATCGAAATCTCGTTTCTGCTG > 1:223067/1‑267 TCAAAC‑TTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATC‑‑TTTTTCCAGCG‑TTCATTAGCTTGGTTGATATCGTCAATTTTCATCAAAA‑TCGCGAC‑‑‑‑‑‑‑TTTTTTTTACTGTTTATTTCTGAAAC‑TTCATCG‑TTAACGGATA‑TTGCCC‑TTTTTCGAGCG‑TTACCCAGTCATCCTGCAATTTACGGCTAAGT > 1:223068/1‑193 GCGCCGCAGTTGTTCGGTATCTTTTTTTCCAGCG‑TTCATTAGCTTGGTTGATATCGTCAATTTTCATCAAAA‑TCGCGAC‑‑‑‑‑‑TTTT > 1:747743/1‑83 GCTTGGTTGATATCGTCAATTTTCATCAAAA‑TCGCGACT‑‑‑‑‑TTTTTTTTTACTGTTTATTTCTG‑AAC‑TTCATCG‑TTAACGGATA‑TTGCCCTTTTTTCGAGCctgt > 1:1142832/1‑99 TGGTTGATATCGTCAATTTTCATCAAAA‑TCGCGACT‑‑‑‑‑TTTTTTTTTACTGTTTATTTCTGAAACTTTCATCG‑TTAACGGATA‑TTGCCC‑TTTTTCGAGCGTTTACCCAGTCATCCTGCAATTTACGGCTAAGTTTTTGTGATTGCAGAAAAGTCTGTCGCCGTTGTTCGTTGATATCGAAATCTCGTTTCTGCTGAATCGGCACTTCATAACACTCTTCACTCTGTTTATGACATGCCGCAATCGCCGGTTGATAAACCTCTTTGTCATATTTAACCGCGAACGCCTCGCT > 1:223072/1‑289 ATCGTCAATTTTCATCAAAA‑TCGCGAC‑‑‑‑‑‑TTTTTTTTTACTGTTTATTTCTGAAACTTTCATCG‑TTAACGGATA‑TTGCCC‑TTTTTCGAGCG‑TTACCCAGTCATCCTGCAATTTACGGCTAAGTTTTTGTGATTGCAGAAAAGTCTGTCGCCGTTGTTCGTTGATATCGAAATCTCGTTTCTGCTGAATCGGCACT > 1:223073/1‑193 AATTTTCATCAAAA‑TCGCGAC‑‑‑‑‑‑TTTTTTTTTACTGTTTATTTCTGAAACTTTCATCG‑TTAACGGATA‑TTGCCCTTTTTTCGAGCG‑TTACCCAGTCATCCTGCAATTTACGGCTAAGTTTTTGTGATTGCAGAAAAGTCTGTCGCCGTTGTTCGTTGATATCGAAATCTCGTTTCTGCTGAATCGGCACTTCATAACACTCTTCACTCTGTTTATGACATGCCGCAATCGCCGGTTGATAAACCTCTTTGTCATATTTAACCGCGAACGCCTCGCTATCGTTCTGTTTATTAAACTCATCACTGCTGT > 1:747753/1‑306 TTCATCAAAA‑TCGCGAC‑‑‑‑‑‑‑TTTTTTTTACTGTTTATTTCTGAAACTTTCATCG‑TTAACGGATA‑TTGCCC‑TTTTTCGAGCG‑TTACCCAGTCATCCTGCAATTTACGGCTAAGTTTTTGTGATTGCAGAAAAGTCTGTCGCCGT > 1:747754/1‑140 ||||||||| TTTAAATTCGCTGCTGGAGC‑TTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGT‑GGCAGCGG‑TTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCA‑GACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAAC‑TTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATC‑TTTTTTCCAGCG‑TTCATTAGCTTGGTTGATATCGTCAATTTTCATCAAAA‑TCGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3098367‑3098653‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTACTGTTTATTTCTGAAACTTTCATCG‑TTAACGGATA‑TTGCCC‑TTTTTCGAGCG‑TTACCCAGTCATCCTGCAATTTACGGCTAAGTTTTTGTGATTGCAGAAAAGTCTGTCGCCGTTGTTCGTTGATATCGAAATCTCGTTTCTGCTGAATCGGCACTTCATAACACTCTTCACTCTGTTTATGACATGCCGCAATCGCCGGTTGATAAACCTCTTTGTCATATTTAACCGCGAACGCCTCGCTATCGTTCTGTTTATTAAACTCATCAC‑GCTGT > NC_000913/3098654‑3098933 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |