Missing coverage evidence... | ||||||||||
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seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 3423700–3424234 | 3424515–3424238 | 5–816 | 16 [15] | [15] 16 | [rrfD]–[rrlD] | [rrfD],[rrlD] |
CATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGA‑TA‑CCCAGAGTCGAACTGGGG‑ACCTCA‑CCCTTACCAA‑GGGTGCGC‑TCTACCAA‑CTGAGCCATATCA‑GCA‑CGCT‑AAA‑TTT‑GATG‑CCTGGCAGTT‑CCC‑TA‑CTC‑TCGCAT‑GGGGAGA‑CCCC‑ACACTACCATCGGCGCTACGGCG‑TTTCACTTC‑TGAGTT‑C‑GGCATGGGGTCAGGT‑GGGACCACCGCGCT‑ACGGCCGCCAGGCAAATTCTG‑TTTTATCAGACCGC‑TTCTGCGTTCTGATTTAA‑TCTGTATC‑AGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGC > NC_000913/3423502‑3423930 | cATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGA‑TACCCCAGAGTCGAACTGGGG‑ACCTCACCCCTTACCAA‑GGGTGCGC‑TCTACCAA‑CTGAGCCATATCA‑GCA‑CGCT‑AAA‑TTT‑GATG‑CCTGGCAGTTCCCC‑TA‑CTC‑TCGCAT‑GGGGAGA‑CCCC‑ACACTACCATCGGCGCTACGGCG‑TTTCACTTC‑TGa < 1:787679/242‑1 (MQ=255) caccGCGCTACTGCCGCCAGAC‑AATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGA‑TACCCCAGAGTCGAACTGGGG‑ACCTCACCCCTTACCAA‑GGGTGCGC‑TCTACCAA‑CTGAGCCATATCA‑GCA‑CGCT‑AAA‑TTT‑GATG‑CCTGGCAGTTCCCC‑TA‑CTC‑TCGCAT‑GGGGAGA‑CCCC‑ACACTACCATCGgcgc < 1:787682/204‑1 (MQ=38) aTTCTTTTCTAATCTGCCGAAC‑TTAACCTAAAAAGTGGTGCTGA‑TA‑CCCAGAGTCGAACTGGGG‑ACCTCA‑CCCTTACCAA‑GGGTGCGC‑TCTACCAA‑CTGAGCCATATCA‑GCA‑CGCT‑AAACTTT‑GATG‑CCTGGCAGTT‑CCCGTA‑CTC‑TCGCAT‑GGGGAGA‑CCCC‑ACACTACCATCGGCGCTACGGCg > 1:787684/1‑186 (MQ=255) aTTCTTTTCTAATCTGCCGAAC‑TTAACCTAAAAAGT‑GTGCTGA‑TA‑CCCAGAGTCGAACTGGGG‑ACCTCA‑CCCTTACCAA‑GGGTGCGC‑TCTACCAACCTGAGCCATATCA‑GCA‑CGCT‑AAA‑TTTCGATG‑CCTGGCAGTT‑CCC‑TACCTC‑TCGCAT‑GGGga > 1:968401/1‑157 (MQ=37) cTTTTCTAATCTGCCGAAC‑TTAACCTAAAAAGTGGTGCTGACTA‑CCCAGAGTCGAACTGGGGAACCTCA‑CCCTTACCAAGGGGTGCGC‑TCTACCAACCTGAGCCATATCATGCAGCGCT‑AAA‑TTT‑GATG‑CCTGGCAGTT‑CCC‑TA‑CTC‑TCGCAT‑GGGGAGA‑CCCC‑ACACt > 1:787685/1‑169 (MQ=25) gA‑TA‑CCCAGAGTCGAACTGGGG‑ACCTCA‑CCCTTACCAA‑GGGTGCGC‑TCTACCAA‑CTGAGCCATATCA‑GCA‑CGCT‑AAATTTT‑GATG‑CCTGGCAGTT‑CCC‑TA‑CTC‑TCGCAT‑GGGGAGA‑CCCC‑ACACTACCATCGGCGCTACGGCG‑TTTCACTTC‑TGAGTT‑C‑GGCATGGGGTCAGGT‑GGGACCACCGCGCT‑ACGGCCGCCAGGCAAATTCTGTTTTTATCAGACCGCTTTCTGCGtt > 1:245127/1‑234 (MQ=255) tCA‑CCCTTACCAA‑GGGT‑CGC‑TCTACCAA‑CTGAGCCATATCA‑GCA‑CGCT‑AAA‑TTT‑GATG‑CCTGGCAGTT‑CCC‑TA‑CTC‑TCGCAT‑GGGGAGA‑CCCC‑ACACTACCATCGGCGCTACGGCGTTTTCACTTCTTGAGTTACGGGCATGGGGTCAGGT‑GGGACCACCGCGCTAACGGCCGCCAGGCAAATTCTG‑TTTTATCAGACCGC‑TTCTGCGTTCTGATTTAA‑TCTGTATCAAGGCTGAAAATCTtctct < 1:1028978/246‑1 (MQ=17) a‑CCCTTACCAA‑GGGTGCGCTTCTACCAA‑CTGAGCCATATCA‑GCA‑CGCTAAAA‑TTT‑GATGACCTGGCAGTTCCCC‑TA‑CTC‑TCGCAT‑GGGGAGA‑CCCCAACACTACCATCGGCGCTACGGCG‑TTTCACTTC‑TGAGTT‑C‑GGCATGGGGTCAGGT‑GGGACCACCGCGCT‑ACGGCCGCCAGGCAAATTCTG‑ttt < 1:787686/189‑1 (MQ=17) tACCAA‑GGGTGCGC‑TCTACCAA‑CTGAGCCATATCA‑GCA‑CGCT‑AAA‑TTT‑GATG‑CCTGGCAGTT‑CCC‑TA‑CTC‑TCGCAT‑GGGGAGA‑CCCC‑ACACTACCATCGGCGCTACGGCG‑TTTCACTTC‑TGAGTT‑C‑GGCATGGGGTCa > 1:245129/1‑138 (MQ=255) aggggTGCGC‑TCTACCAA‑CTGAGCCATATCA‑GCA‑CGCT‑AAA‑TTT‑GATG‑CCTGGCAGTT‑CCC‑TA‑CTC‑TCGCAT‑GGGGAGA‑CCCC‑ACACTACCATCGGCGCTACGGCGTTTTCACTTC‑TGAGTT‑C‑GGCATGGGGTCAGGTGGGGACCACCGCGCT‑ACGGCCGCCAGGCAAATTCTG‑TTTTATCAGACCGC‑TTCTGCGTTCTGATTTAA‑TCTGTATC‑AGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTgc > 1:787689/3‑310 (MQ=255) cgc‑TCTACCAA‑CTGAGCCATATCA‑GCA‑CGCT‑‑AA‑TTT‑GATG‑CCTGGCAGTTCCCC‑TA‑CTC‑TCGCAT‑GGGGAGA‑CCCC‑ACACTACCATCGGCGCTACGGCG‑TTTCACTTC‑TGAGTT‑C‑GGCATGGGGTCAGGT‑GGGACCACCGCGCT‑ACGGCCGCCAGGCAAATTCTG‑TTTTATCAGACCGC‑TTCTGCGTTCTGATTTAA‑TCTGTATC‑AGGCTGaaa < 1:787687/214‑1 (MQ=255) tACCAA‑CTGAGCCATATCA‑GCA‑CGCT‑AAA‑TTT‑GATG‑CCTGGCAGTT‑CCC‑TA‑CTC‑TCGCATGGGGGAGACCCCC‑ACACTACCATCGGCGCTACGGCG‑TTTCACTTC‑TGAGTT‑CGGGCATGGGGTCAGGT‑GGGACCACCGCGCT‑ACGGCCGCCAGGCAAATTCTG‑TTTTAt < 1:1168180/169‑1 (MQ=14) ccAA‑CTGAGCCATATCA‑GCA‑CGCT‑AAA‑TTT‑GATG‑CCTGGCAGTT‑CCC‑TA‑CTC‑TCGCAT‑GGGGAGA‑CCCC‑ACACTACCATCGGCGCTACGGCG‑TTTCACTTC‑TGAGTT‑C‑GGCATGGGGt < 1:787688/118‑1 (MQ=255) aGCCATATCA‑GCA‑CGCT‑AAA‑TTT‑GATG‑CCTGGCAGTT‑CCC‑TA‑CTC‑TCGCAT‑GGGGAGA‑CCCC‑ACACTACCATCGGCGCTACGGCG‑TTTCACTTC‑TGAGTT‑C‑GGCATGGGGTCAGGT‑GGGACCACCGCGCT‑ACGGCCGCCAGGCAAATTCTG‑TTTTATCAGACCGC‑TTCTGCGTTCTGATTTAATTCTGTATC‑AGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCa > 1:1148683/1‑276 (MQ=37) atcaa‑GCA‑CGCT‑AAA‑TTT‑GATG‑CCTGGCAGTT‑CCC‑TA‑CTCATCGCAT‑GGGGAGA‑CCCC‑ACACTACCATCGGCGCTACGGCG‑TTTCACTTC‑TGAGTT‑C‑gg < 1:787691/95‑1 (MQ=14) tCA‑GCA‑CGCT‑AAA‑TTT‑GATG‑CCTGGCAGTT‑CCC‑TA‑CTC‑TCGCAT‑GGGGAGA‑CCCC‑ACACTACCATCGGCGCTACGGCG‑TTTCACTTC‑TGAGTT‑C‑GGCATGGGGTCAGGTGGGGACCACCGCGCT‑ACGGCCGCCAGGCAAATTCTG‑TTTTATCAGACCGC‑TTCTGCGTTCTGATTTAA‑TCTGTATC‑AGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCAt > 1:787692/1‑252 (MQ=21) | CATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGA‑TA‑CCCAGAGTCGAACTGGGG‑ACCTCA‑CCCTTACCAA‑GGGTGCGC‑TCTACCAA‑CTGAGCCATATCA‑GCA‑CGCT‑AAA‑TTT‑GATG‑CCTGGCAGTT‑CCC‑TA‑CTC‑TCGCAT‑GGGGAGA‑CCCC‑ACACTACCATCGGCGCTACGGCG‑TTTCACTTC‑TGAGTT‑C‑GGCATGGGGTCAGGT‑GGGACCACCGCGCT‑ACGGCCGCCAGGCAAATTCTG‑TTTTATCAGACCGC‑TTCTGCGTTCTGATTTAA‑TCTGTATC‑AGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGC > NC_000913/3423502‑3423930 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |