Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	164533	164614	82	16 [15]	[10] 18	[hrpB]	[hrpB]

CCTCACCC‑TAACCCTCTCCCTCAAGGGAGAGGGGA‑CCGATCGAGCAC‑AAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGT‑AACAGAAGAAC‑AGAAAATCGGGC‑TTTTGCGCCTGAATATTGCGGAGAAAAAGCATGGCCGGGAATGACCGCGAGCCAATTGGACGCAAAGGGAAACCGACGCGTCCGGTCAAAC‑AAAAGGTAAGCCGTCGTCGTTACGAAGATGACGATGATTACGACGATTATGATGACTATGAGGATG‑AAGAACCGATGCCGCGCAAAGGTAAGGGCAAAGGCAA  >  NC_000913/164599‑164893                  |                                                                                                                                                                                                                                                                                                  cctcacccgTAACCCTCTCCCTCAAGGGAGAGGGGA‑CCGATCGAGCACAAAATTTTGAAGACGATATCTTTACTTCTGTCTTGT‑AACAGAAGAACGAGAAAATCGGGC‑TTTTGCGCCTGAATATTGCGGAG‑AAAAGCATGGCCgg                                                                                                                                                                <  1:359880/145‑1 (MQ=255)  ctcaccc‑tAACCCTCTCCCTCAAGGGAGAGGGGA‑CCGATCGAGCAC‑AAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGT‑AACAGAAGAAC‑AG‑AAATCGGGC‑TTTTGCGCCTGAATATTGCGGAGAAAAAGCATGGCCGGGAATGACCGCGAGCCAATTGGACGCa                                                                                                                                      <  1:11104/163‑1 (MQ=255)     accc‑tAACCCTCTCCCTCAAGGGAGA‑GGGA‑CCGATCGAGCAC‑AAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGT‑AACAGAAGAAC‑AG‑AAATCGGGC‑TTTTGCGCCTGAATATTGCGGAGAAAAAGCA‑GGCCGGGAATGACCGCGAGCCAATTGGACGCAAAGGGAAACCGACGCGT‑CGGTCAAAC‑‑AAAGGTAAGCCGTCGTCGTTACGAAGATGACGATGATTA‑GACGATTATGATGACTATGAGGATGAAAGAACCGATGCCGCGCAAAGGTAAGggcaaaggcaa  <  1:1020450/286‑1 (MQ=255)      acc‑tAACCCTCTCCCTCAAGGGAGAGGGGA‑CCGATCGAGCAC‑AAATTTTg                                                                                                                                                                                                                                                           >  1:1246524/2‑50 (MQ=255)        c‑tAACCCTCTCCCTCAAGGGAGA‑GGGA‑CCGATCGAGCAC‑AAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGT‑AACAGAAGAAG‑AG‑AAATCGGGC‑TTTTGCGCCTGAATATTGCGGAG‑AAAAGCATGGCCGGGAATGACCGCGAGCCAATTGGACGCAAAGGGAAACCGACGCGTCCGGTCAAACAAAAAGGTAAGCCGTCGTCGTTACGaa                                                                                <  1:11105/209‑1 (MQ=255)               ctctCCCTCAAGGGAGA‑GGGA‑CCGATCGAGCAC‑AAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGTAAACAGAAGAACGAGAAAATCGGGC‑TTTTGCGCCTGAATATTGCGGAGAAAAAG‑ATGGCCGGGAATGACCGCGAGCCAATTGGACGCAAAGGGAAACCGACGCGTCCGGTCAAAC‑AAAAGGTAAGCCGTCGTCGTTACGAAGATGACGATGATTACGACGATTATGATGACTATGAGGATG‑AAGAACCGATG‑CGCGCAAAGGTAAGggcaaaggcaa  <  1:11106/281‑1 (MQ=255)                tctcCCTCAAGGGAGAGGGGA‑CCGATCGAGCAC‑AAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGT‑AACAGAAGAAC‑AGAAAATCGGGC‑TTTTGCGCCTGaa                                                                                                                                                                                         <  1:359889/100‑1 (MQ=255)                tctcCCTCAAGGGAGAGGGGA‑CCGATCGAGCAC‑AAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGT‑AACAGAAGAAC‑AGAAAATCGGGC‑TTTTGCGCCTGAATATTGCGGAGAAAAAGc                                                                                                                                                                        <  1:359886/117‑1 (MQ=255)                 ctcCCTCAAGGGAGAGGGGAGCCGATCGAGCAC‑AAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGT‑AACAgaagaaaca                                                                                                                                                                                                                  >  1:11112/1‑74 (MQ=255)                 ctcCCTCAAGGGAGAGGGGA‑CCGATCGAGCACAAAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGT‑AACAGAAGAAC‑AGAAAATCGGGC‑TTTTGCGCCTGaa                                                                                                                                                                                         <  1:359885/100‑1 (MQ=255)                  tcCCTCAAGGGAGAGGGGA‑CCGATCGAGCACAAAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGT‑AACAGAAGAAC‑AGaaaa                                                                                                                                                                                                             <  1:359883/80‑1 (MQ=255)                  tcCCTCAAGGGAGAGGGGA‑CCGATCGAGCACAAAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGT‑AACAGAAGAAC‑AGAAAATCGGGC‑TTTTGCGCCTGAATATTGCGGAG‑AAAAGCATGGCCGGGAATGACCGCGAGCCAATTGGACGc                                                                                                                                       <  1:359884/148‑1 (MQ=255)                  tcCCTCAAGGGAGAGGGGA‑CCGATCGAGCAC‑AAATTTTg‑aga                                                                                                                                                                                                                                                       <  1:11108/42‑1 (MQ=255)                  tcCCTCAAGGGAGAGGGGA‑CCGATCGAGCAC‑AAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGT‑AACAGAAGAAC‑AGAAAATCGGGC‑TTTTGCGCCTGAATATTGCGGAGAAAAAGCATGGCCGGGAATGACCGCGAGCCAATTGGACGCAAAGGGAAACCGACGCGTCCGGTCAAAC‑AAAAGGTAAGCCGTCGTCGTTACGAAGATGACGATGATTACGACGAt                                                           <  1:11109/223‑1 (MQ=255)                  tcCCTCAAGGGAGAGGGGA‑CCGATCGAGCAC‑AAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGT‑AACAGAAGAAC‑AGAAAATCGGGC‑TTTTGCGCCTGAATATTGCGGAG‑AAAAGCATGGCCGGGAATGACCGCGAGCCAATTGGACGCAAAGGGAAACCGACGCGTCCGGTcaaac‑aa                                                                                                        <  1:359882/177‑1 (MQ=255)                  tcCCTCAAGGGAGA‑GGGA‑CCGATCGAGCAC‑AAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTg                                                                                                                                                                                                                                 <  1:11110/60‑1 (MQ=255)                  tcCCTCAAGGGAGA‑GGGA‑CCGATCGAGCAC‑AAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGT‑AACAGAAGAAC‑AGAAAATCGGGCTTTTTGCGCCTg                                                                                                                                                                                           <  1:11107/96‑1 (MQ=255)                  tcCCTCAAGGGAGA‑GGGA‑CCGATCGAGCAC‑AAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGT‑AACAGAAGAAC‑AGAAAATCGGGC‑TTTTGCGCCTGAATATTGCGGAGAAAAAGCATGGCCggg                                                                                                                                                               <  1:359881/123‑1 (MQ=255)                  |                                                                                                                                                                                                                                                                                                  CCTCACCC‑TAACCCTCTCCCTCAAGGGAGAGGGGA‑CCGATCGAGCAC‑AAATTTTG‑AGA‑GATATCTT‑‑CTTCTGTCTTGT‑AACAGAAGAAC‑AGAAAATCGGGC‑TTTTGCGCCTGAATATTGCGGAGAAAAAGCATGGCCGGGAATGACCGCGAGCCAATTGGACGCAAAGGGAAACCGACGCGTCCGGTCAAAC‑AAAAGGTAAGCCGTCGTCGTTACGAAGATGACGATGATTACGACGATTATGATGACTATGAGGATG‑AAGAACCGATGCCGCGCAAAGGTAAGGGCAAAGGCAA  >  NC_000913/164599‑164893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑