New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1941980 =	8 (0.590)	4 (0.320)	4/248	NT	29.1%	coding (604/933 nt)	znuA	Zn(2(+)) ABC transporter periplasmic binding protein
	?	NC_000913	1942149 =	12 (0.950)					coding (435/933 nt)	znuA	Zn(2(+)) ABC transporter periplasmic binding protein

TCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGCGGTGTCAGTCCAAACTGTTTTTCGAAATAGCCGTAAGCATCGTGAAAAACGAAATAACCTTTCCCCTTGAGCGGCGCGAGCTCGTTACCAACCTGCGTTTCGGTTGAGGCTAATTGTGCCTCAAAATCCTTCAGGTTGGCGTCAAGTTTGGCTCGACTTTGCGGCATAAGTTCCACTAATTTTCCATGGATTGCAACCGCTGTAGCCCGCGCTATCTCTGGGGAAAGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTC  >  NC_000913/1941858‑1942208                                                                                                                           |                                                                                                                                                                                                                                     tCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGCGGTGTCAGTCCAAACTGTTTTTCGAAATAGCCGTAAGCATCGTGAAAAACGAAATAACCTTTCCCCt                                                                                                                                                                                                                              >  2:11170/1‑131 (MQ=255)    tATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGCGGTGTCAGTCCAAACTGTTTTTCGAAATAGCCGTAAGCATCGTGAAAAACGAAATAACCTTTCCCCTTGa                                                                                                                                                                                                                           <  1:11170/131‑1 (MQ=255)     gcttgaagatgtgaaaccgctactgatgaaaagtattcacggcgatgatgatgatcacgaccacgcggaaaaaagtgacgaagatcaccatcacggcgatttcaacatgcatctttggCt                                                                                                                                                                                                                                     >  1:263538‑M1/119‑120 (MQ=255)                                                     aaaTGACCAAGCGGTGTCAGTCCAAACTGTTTTTCGAAATAGCCGTAAGCATCGTGAAAAACGAAATAACCTTTCCCCTTGAGCGGCGCGAGCTCGTTACCAACCTGCGTTTCGGTTGAGGCTAATTGTGCCTCAAAATCCTTCAGGTTg                                                                                                                                                       >  1:124299/1‑150 (MQ=255)                                                        tgatcacgaccacgcggaaaaaagtgacgaagatcaccatcacggcgatttcaacatgcatctttggCTTTCCCCTTGAGCGGCGCGAGCTCGTTACCAACCTGCGTTTCGGt                                                                                                                                                                                         <  2:239194‑M1/46‑1 (MQ=255)                                                        tGACCAAGCGGTGTCAGTCCAAACTGTTTTTCGAAATAGCCGTAAGCATCGTGAAAAACGAAATAACCTTTCCCCTTGAGCGGCGCGAGCTCGTTACCAACCTGCGTTTCGGTTGAGGCTAATTGTGCCTCAAAATCCTTCAGGTTGGCg                                                                                                                                                    <  2:124298/150‑1 (MQ=255)                                                           tcacgaccacgcggaaaaaagtgacgaagatcaccatcacggcgatttcaacatgcatctttggCTTTCCCCTTGAGCGGCGCGAGCTCGTTACCAACCTGCGTTTCGGTTGa                                                                                                                                                                                      >  1:239195‑M1/65‑113 (MQ=255)                                                                   acgcggaaaaaagtgacgaagatcaccatcacggcgatttcaacatgcatctttggCTTTCCCCTTGAgcgg                                                                                                                                                                                                                       <  2:251125‑M1/16‑1 (MQ=255)                                                                      cggaaaaaagtgacgaagatcaccatcacggcgatttcaacatgcatctttggCTTTCCCCTTGAGCGgcgc                                                                                                                                                                                                                    >  1:251126‑M1/54‑72 (MQ=255)                                                                                                     gCATCGTGAAAAACGAAATAACCTTTCCCCTTGAGCGGCGCGAGCTCGTTACCAACCTGCGTTTCGGTTGAGGCTAATTGTGCCTCAAAATCCTTCAGGTTGGCGTCAAGTTTGGCTCGACTTTGCGGCATAAGTTCCACTAATTTTCCATGGATTGCAACCGCTGTAGCCCGCGCTATCTCTGGGGAAAGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATc                          >  1:232978/1‑227 (MQ=255)                                                                                                          gTGAAAAACGAAATAACCTTTCCCCTTGAGCGGCGCGAGCTCGTTACCAACCTGCGTTTCGGTTGAGGCTAATTGTGCCTCAAAATCCtt                                                                                                                                                              >  2:72389/1‑90 (MQ=255)                                                                                                             aaaaaCGAAATAACCTTTCCCCTTGAGCGGCGCGAGCTCGTTACCAACCTGCGTTTCGGTTGAGGCTAATTGTGCCTCAAAATCCTTCAg                                                                                                                                                           <  1:72390/90‑1 (MQ=255)                                                                                                             aaaaaCGAAATAACCTTTCCCCTTGAGCGGCGCGAGCTCGTTACCAACCTGCGTTTCGGTTGAGGCTAATTGTGCCTCAAAATCCTTCAGGTTGGCGTCAAGTTTGGCTCGACTTTGCGGCATAAGTTCCACTAATTTTCCATGGATTGCAACCGCTGTAGCCCGCGCTATCTCTGGGGAAAGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTc  <  1:264085/243‑1 (MQ=255)                                                                                                                           |                                                                                                                                                                                                                                     TCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGCGGTGTCAGTCCAAACTGTTTTTCGAAATAGCCGTAAGCATCGTGAAAAACGAAATAACCTTTCCCCTTGAGCGGCGCGAGCTCGTTACCAACCTGCGTTTCGGTTGAGGCTAATTGTGCCTCAAAATCCTTCAGGTTGGCGTCAAGTTTGGCTCGACTTTGCGGCATAAGTTCCACTAATTTTCCATGGATTGCAACCGCTGTAGCCCGCGCTATCTCTGGGGAAAGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTC  >  NC_000913/1941858‑1942208

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.