New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 41643811 (0.820)4 (0.310) 4/250 NT 31.5% coding (515/1203 nt) sbcD ATP dependent, structure specific DNA nuclease ‑ SbcD subunit
?NC_000913 = 416786 7 (0.550)coding (167/1203 nt) sbcD ATP dependent, structure specific DNA nuclease ‑ SbcD subunit

CAGCACTGCGCCTGGCGTCCCGTCGCGACGAGGCAAGATTTGCGGCGCATGTCCGGCGCTGGCGACCACGGTAGTATTGAGGAACGCCATGATATCGCGCGATTCATTCAGCGTGGCGACCGAGTCATGGTTTCCTGCCAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTTGTGCTGTCTCCAGCAGCCAGTCAAGAAAAGCCTGATGTTCAGCTTCGCGGCTTTTACTGTAGAAGTTCTGGCCGAGATGCCAGTCTGAGGTGTGAAGGATGC  >  NC_000913/416575‑416948
                                                                                                                                                                                                                   |                                                                                                                                                                  
catcACTGCGCCTGGCTTCCCGTCGCGACGAGGCAAGATTTGCGGCGCATGGCCGGCGCTGGCGACCACGGTAGTATTGAGGAACGCCATGATATCGCGCGATTCATTCAGCGTGGCGACCGAGTCATGGTTTCCTGCCAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTtgt                                                                                                      <  1:155670/271‑1 (MQ=255)
                                                                                    cGCCATGATATCGCGCGATTCATTCAGCGTGGCGACCGAGTCATGGTTTCCTGCCAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTTGTGCTGTCTCCAGCAGCCAGTCAAGAAAAGCCTGATGTTCAGCTTCGCGGCTTTTACTGTAGAAGTTCTGGCCGAGATGCCAGTc                   <  1:181279/273‑1 (MQ=255)
                                                                                                               cGTGGCGACCGAGTCATGGTTTCCTGCCAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGCgcggcgatcagcc                                                                                                                                                       <  1:200253‑M2/114‑14 (MQ=255)
                                                                                                                  ggCGACCGAGTCATGGTTTCCTGCCAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGCgcggcgatcagcctct                                                                                                                                                    >  2:200252‑M2/1‑98 (MQ=255)
                                                                                                                                      cTGCCAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCAc                                                                                                                                         >  2:39592/1‑105 (MQ=255)
                                                                                                                                         ccAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCACCgg                                                                                                                                      <  1:39592/105‑1 (MQ=255)
                                                                                                                                                        gACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGgcggcgatcagcctctgcccatcatcgccacgggacatttaacgaccgtgggggccagtaaaagtgacgccgtgc                                                                                         <  2:611‑M2/135‑76 (MQ=255)
                                                                                                                                                           aGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGgcggcgatcagcctctgcccatcatcgccacgggacatttaacgaccgtgggggccagtaaaagtgacgccgtgcgtg                                                                                      >  1:611‑M2/1‑57 (MQ=255)
                                                                                                                                                                  ttGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTTGTGCTGTCTCCAGCAGCCAGTCAAGAAAAGCCTGATGTTCAGCTTCGCgg                                                      >  1:16069/1‑160 (MQ=255)
                                                                                                                                                                     cTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTTGTGCTGTCTCCAGCAGCCAGTCAAGAAAAGCCTGATGTTCAGCTTCGCGGCtt                                                   <  2:16069/160‑1 (MQ=255)
                                                                                                                                                                                                              aaCTGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTTGTGCTGTCTCCAGCAGCCAGTCAAGAAAAGCCTGATGTTCAGCTTCGCGGCTTTTACTGTAGAAGTTCTGGCCGAGATGCCAGTCTGAGGTGTGAAGGa     >  2:27845/1‑165 (MQ=255)
                                                                                                                                                                                                                 tGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTTGTGCTGTCTCCAGCAGCCAGTCAAGAAAAGCCTGATGTTCAGCTTCGCGGCTTTTACTGTAGAAGTTCTGGCCGAGATGCCAGTCTGAGGTGTGAAGGATgc  <  1:27845/165‑1 (MQ=255)
                                                                                                                                                                                                                   |                                                                                                                                                                  
CAGCACTGCGCCTGGCGTCCCGTCGCGACGAGGCAAGATTTGCGGCGCATGTCCGGCGCTGGCGACCACGGTAGTATTGAGGAACGCCATGATATCGCGCGATTCATTCAGCGTGGCGACCGAGTCATGGTTTCCTGCCAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTTGTGCTGTCTCCAGCAGCCAGTCAAGAAAAGCCTGATGTTCAGCTTCGCGGCTTTTACTGTAGAAGTTCTGGCCGAGATGCCAGTCTGAGGTGTGAAGGATGC  >  NC_000913/416575‑416948

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.