New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 416438 | 11 (0.820) | 4 (0.310) | 4/250 | NT | 31.5% | coding (515/1203 nt) | sbcD | ATP dependent, structure specific DNA nuclease ‑ SbcD subunit |
? | NC_000913 | = 416786 | 7 (0.550) | coding (167/1203 nt) | sbcD | ATP dependent, structure specific DNA nuclease ‑ SbcD subunit |
CAGCACTGCGCCTGGCGTCCCGTCGCGACGAGGCAAGATTTGCGGCGCATGTCCGGCGCTGGCGACCACGGTAGTATTGAGGAACGCCATGATATCGCGCGATTCATTCAGCGTGGCGACCGAGTCATGGTTTCCTGCCAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTTGTGCTGTCTCCAGCAGCCAGTCAAGAAAAGCCTGATGTTCAGCTTCGCGGCTTTTACTGTAGAAGTTCTGGCCGAGATGCCAGTCTGAGGTGTGAAGGATGC > NC_000913/416575‑416948 | catcACTGCGCCTGGCTTCCCGTCGCGACGAGGCAAGATTTGCGGCGCATGGCCGGCGCTGGCGACCACGGTAGTATTGAGGAACGCCATGATATCGCGCGATTCATTCAGCGTGGCGACCGAGTCATGGTTTCCTGCCAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTtgt < 1:155670/271‑1 (MQ=255) cGCCATGATATCGCGCGATTCATTCAGCGTGGCGACCGAGTCATGGTTTCCTGCCAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTTGTGCTGTCTCCAGCAGCCAGTCAAGAAAAGCCTGATGTTCAGCTTCGCGGCTTTTACTGTAGAAGTTCTGGCCGAGATGCCAGTc < 1:181279/273‑1 (MQ=255) cGTGGCGACCGAGTCATGGTTTCCTGCCAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGCgcggcgatcagcc < 1:200253‑M2/114‑14 (MQ=255) ggCGACCGAGTCATGGTTTCCTGCCAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGCgcggcgatcagcctct > 2:200252‑M2/1‑98 (MQ=255) cTGCCAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCAc > 2:39592/1‑105 (MQ=255) ccAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCACCgg < 1:39592/105‑1 (MQ=255) gACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGgcggcgatcagcctctgcccatcatcgccacgggacatttaacgaccgtgggggccagtaaaagtgacgccgtgc < 2:611‑M2/135‑76 (MQ=255) aGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGgcggcgatcagcctctgcccatcatcgccacgggacatttaacgaccgtgggggccagtaaaagtgacgccgtgcgtg > 1:611‑M2/1‑57 (MQ=255) ttGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTTGTGCTGTCTCCAGCAGCCAGTCAAGAAAAGCCTGATGTTCAGCTTCGCgg > 1:16069/1‑160 (MQ=255) cTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTTGTGCTGTCTCCAGCAGCCAGTCAAGAAAAGCCTGATGTTCAGCTTCGCGGCtt < 2:16069/160‑1 (MQ=255) aaCTGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTTGTGCTGTCTCCAGCAGCCAGTCAAGAAAAGCCTGATGTTCAGCTTCGCGGCTTTTACTGTAGAAGTTCTGGCCGAGATGCCAGTCTGAGGTGTGAAGGa > 2:27845/1‑165 (MQ=255) tGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTTGTGCTGTCTCCAGCAGCCAGTCAAGAAAAGCCTGATGTTCAGCTTCGCGGCTTTTACTGTAGAAGTTCTGGCCGAGATGCCAGTCTGAGGTGTGAAGGATgc < 1:27845/165‑1 (MQ=255) | CAGCACTGCGCCTGGCGTCCCGTCGCGACGAGGCAAGATTTGCGGCGCATGTCCGGCGCTGGCGACCACGGTAGTATTGAGGAACGCCATGATATCGCGCGATTCATTCAGCGTGGCGACCGAGTCATGGTTTCCTGCCAGTACCACCAGATGACAGCCAGTTTGCTGTAAATTGACAACAAAACGGTTGTATAACGTGCGGGCGTAACTGGGCGGCGAGCCGGTATCGAAAACATCACCGGCAACAATAATCGCATCCACCTGATGGGTTTGTGCTGTCTCCAGCAGCCAGTCAAGAAAAGCCTGATGTTCAGCTTCGCGGCTTTTACTGTAGAAGTTCTGGCCGAGATGCCAGTCTGAGGTGTGAAGGATGC > NC_000913/416575‑416948 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |