New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207805	22 (0.710)	12 (0.420)	11/344	NT	38.0%	coding (305/630 nt)	ycfK	e14 prophage; protein StfP
	?	NC_000913	= 1209602	19 (0.670)					pseudogene (54/537 nt)	stfE	e14 prophage; putative side tail fiber protein fragment

AGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAA‑TCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGG  >  NC_000913/1207538‑1208046                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                    aGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGctct                                                                                                                                                                                                                                                 <  1:233324‑M1/272‑5 (MQ=255)                aGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGGTTGGCGATATCAACTCGGATGGCACCGTGCAAACGGCCCTCGAAAACCG‑TTGGTTGGGAGAAAGAGGaaaaaacaaggagtaa                                                                                                                                                                                                                                  >  2:219787/1‑260 (MQ=17)                                              ccGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATa                                                                                                                                                                                                   >  1:244193/1‑272 (MQ=255)                                                          ccACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGGTTGGGAGAAGGAGCAAAACTCAATgcagca                                                                                                                                                                                                                                  >  1:249832/1‑230 (MQ=255)                                                             ccGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATgcagca                                                                                                                                                                                                                                  >  1:25071/1‑227 (MQ=255)                                                                        gatgaCTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATACGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAAt                                                                                                                                                                                                                                        >  1:459232/1‑210 (MQ=255)                                                                                  ttGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggcgtgccgaaaggcaatgggtgcgcctgt                                                                                                                                                                >  2:179166‑M1/1‑187 (MQ=255)                                                                                   atcttgtcttgaaaactcagttcgattcctgaacagttaggcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAg                                                                                                                                                              >  2:48558‑M1/171‑272 (MQ=255)                                                                                        tGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCCCTCGAAAACCT‑TGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatgggtcccccttttctgca                                                                                                                                                          >  2:147142‑M1/1‑181 (MQ=255)                                                                                            gCAGGGGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCGGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAA‑TCATTc                                                                                                                                                    <  1:219787/272‑1 (MQ=255)                                                                                             cAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggtt                                                                                                                                                                                                                         >  1:2389‑M1/1‑176 (MQ=255)                                                                                               ggaggaACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGAt                                                                                                                                                                                  <  1:69801/240‑1 (MQ=255)                                                                                                                   tggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAA‑TCATTCa                                                                                                                                                   >  1:3338/1‑250 (MQ=255)                                                                                                                         cagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGa                                                                                                                                                                                   <  2:286790‑M1/81‑1 (MQ=255)                                                                                                                          agcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGAt                                                                                                                                                                                  >  1:286790‑M1/132‑213 (MQ=255)                                                                                                                              ggTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGt                                                                                                                                                                                        >  1:280115/1‑203 (MQ=255)                                                                                                                               gTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGtt                                                                                                                                                                                       <  2:280115/203‑1 (MQ=255)                                                                                                                                   cAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                                                                                                                                                                                      >  2:225183/1‑153 (MQ=255)                                                                                                                                    gttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                                                                                                                       <  2:148324‑M1/93‑1 (MQ=255)                                                                                                                                    aGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaat                                                                                                               <  1:147142‑M1/271‑135 (MQ=255)                                                                                                                                    aGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                                                                                                                                     <  1:225183/153‑1 (MQ=255)                                                                                                                                     ttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                                                                                                                      >  1:148324‑M1/121‑214 (MQ=255)                                                                                                                                                  gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaact                                                                                                                                         >  2:85527‑M1/1‑123 (MQ=255)                                                                                                                                                  gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTAGAAAACCT‑TGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggt                                                                                                                                                                                                                          >  2:387515‑M1/1‑123 (MQ=255)                                                                                                                                                   tctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATgcagca                                                                                                                                                                                                                                  <  2:287893‑M1/35‑1 (MQ=255)                                                                                                                                                   cggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactg                                                                                                                                        <  1:85527‑M1/231‑110 (MQ=255)                                                                                                                                                   cggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTAGAAAACCT‑TGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggtt                                                                                                                                                                                                                         <  1:387515‑M1/150‑29 (MQ=255)                                                                                                                                                    ctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCaa                                                                                                                                                                                                                                 >  1:287893‑M1/106‑141 (MQ=255)                                                                                                                                                           tttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAA‑TCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTcc                                                                                     >  1:468448‑M1/99‑272 (MQ=255)                                                                                                                                                                        gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAA‑TCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGACTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTTCGTTtaa                                                                        >  1:394457/1‑272 (MQ=255)                                                                                                                                                                            ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGGTTGGGAGAAGGAGCAAAACTCAATGAAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATAGGTGGCATTGAGCAATCAGTAA‑TCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAACAACAGGTGTATACACGGGTGCGttaagaaat                                                                    >  1:144385/1‑265 (MQ=38)                                                                                                                                                                                cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAA‑TCCTTCAGTGGGGGTGGAATGCCGCaaaa                                                                                                                             >  2:444027/1‑211 (MQ=255)                                                                                                                                                                                 gcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAA‑TCATTCAGTGGGGGTGGAATGCCGCAAAAg                                                                                                                            <  1:444027/211‑1 (MQ=255)                                                                                                                                                                                   ataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAA‑TCATTCAGTGGGGGTGGAATGCCGCAAAAg                                                                                                                            <  2:87174‑M1/135‑1 (MQ=255)                                                                                                                                                                                    taagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAA‑TCATTCAGTGGGGGTGGAATGCCGCAAAAGc                                                                                                                           >  1:87174‑M1/74‑209 (MQ=255)                                                                                                                                                                                     aagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGAtt                                                                                                                                                                                 <  1:297104‑M1/83‑1 (MQ=255)                                                                                                                                                                                      agcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATtg                                                                                                                                                                                >  2:297104‑M1/72‑155 (MQ=255)                                                                                                                                                                                       gcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTa                                                                                                                                                                                      <  1:344740‑M1/78‑1 (MQ=255)                                                                                                                                                                                        catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTAt                                                                                                                                                                                     >  2:344740‑M1/70‑148 (MQ=255)                                                                                                                                                                                             taaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                                                                                                                                 <  1:379396‑M1/99‑1 (MQ=255)                                                                                                                                                                                              aaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                                                                                                                                >  2:379396‑M1/64‑163 (MQ=255)                                                                                                                                                                                                    aGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCaa                                                                                                                                                                                                                                 >  1:469687/1‑93 (MQ=255)                                                                                                                                                                                                     gAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAAc                                                                                                                                                                                                                                <  2:469687/93‑1 (MQ=255)                                                                                                                                                                                                        ggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGATCAATCAGTAA‑TCATTCAGTGGGGGTGGAATGCCGCAAAAg                                                                                                                            <  1:371309‑M1/135‑1 (MQ=255)                                                                                                                                                                                                         gtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGATCAATCAGTAA‑TCATTCAGTGGGGGTGGAATGCCGCAAAAGc                                                                                                                           >  2:371309‑M1/53‑188 (MQ=255)                                                                                                                                                                                                                   gaatCAAATCCGCTGGAACTGGTGAAACGGCTCTCCAAAACCTGTGTTGTGGGGAAAGGAAAAAAAC‑CAAAGCCGCAACCGGTACAATTGGACGGACCCGGTTCCATGGCTAATCCGGTAGTGTCTGG‑GGTATTGGGCGATTCGTAACTAATTAGGTGGGGGGGGAATGCCGCAAAAGAAAC‑GCCCCTTGGGGGGATGGGAAAACAGTTGTTTTCCCCGTTGCGTTTAATAATGCCTGTTTTTGCGTTGTTGCAAATTATGACAATGTCAgc                             <  2:144385/270‑1 (MQ=255)                                                                                                                                                                                                                        atgccatttgcttgttatttcttcattttcataaacgT‑TGGTTTGGGAGAAGGAGCAAAACTCAATTCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAA‑TCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCAcc                        >  1:211275‑M1/38‑272 (MQ=255)                                                                                                                                                                                                                                           aaaCGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggt                                                 >  2:34738‑M1/1‑34 (MQ=255)                                                                                                                                                                                                                                           aaaCGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAA‑TCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATAc                                                                                                >  2:432457/1‑181 (MQ=255)                                                                                                                                                                                                                                            aaCGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtc                                                <  1:34738‑M1/230‑198 (MQ=255)                                                                                                                                                                                                                                            aaCGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAA‑TCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACa                                                                                               <  1:432457/181‑1 (MQ=255)                                                                                                                                                                                                                                              cgctttccGAAAACCT‑TGGTTGGGGGGAAGAGGACAAACTCAAGGCGGCAACGGTGACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAA‑TCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACgggg  <  2:394457/265‑1 (MQ=255)                                                                                                                                                                                                                                                gCTCTCGAAAACCT‑TGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctggga                                                                          >  1:445766‑M1/1‑29 (MQ=255)                                                                                                                                                                                                                                                     cGAAAACCT‑TGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaag                                   >  1:299022‑M1/1‑24 (MQ=255)                                                                                                                                                                                                                                                                  tttGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttactt                                                                                                 >  1:467736‑M1/1‑12 (MQ=255)                                                                                                                                                                                                                                                                   ttGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtg                                                                                                <  2:467736‑M1/160‑150 (MQ=255)                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                    AGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT‑TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCA‑CCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAA‑TCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGG  >  NC_000913/1207538‑1208046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.