New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2754395	53 (0.810)	4 (0.060)	4/316	NT	5.8%	coding (370/477 nt)	ratA	ribosome association toxin RatA
	?	NC_000913	= 2754461	78 (1.230)					coding (304/477 nt)	ratA	ribosome association toxin RatA

GCAGCGTCACTCGCTGCAGGTACTGCTTCTCAGGTAGCGCATAAGCCACCTCAACGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCGGGTAGTAAACGTTTTGCTGATCCCAGCCTTAGAGACATCTACCGCCGCAGTCATCTGCCCAGGAGTGGACTCCAGAATCCGACTTCCGGTACAACCCGGCAAAAACTGAGGATAAGA  >  NC_000913/2754226‑2754650                                                                                                                                                                           |                                                                                                                                                                                                                                                                tcAGCCTCACTCGTTGCAGGTACTGCTTCTCAGGTAGCACATAATCCACCTCAACGGCAATTTTACCGGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGGCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGAtt                                                                                                                                                           <  1:782369/271‑1 (MQ=255)          cTCGCTGCAGGTACTGCTTCTCAGGTAGCGCATAAGCCACCTCAACGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACCCGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCCTAAACTTACATCCACCAATCAATTTCTTGCACGGCACATCCACCAGCATCATAAAAAt                                                                                                                                                  >  1:914569/1‑272 (MQ=255)          cTCGCTGCAGGTACTGCTTCTCAGGTAGCGCATAAGCCACCTCAACGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATAc                                                                                                                                                                                                                                    >  1:853461/1‑190 (MQ=255)           tCGCTGCAGGTACTGCTTCTCAGGTAGCGCATAAGCCACCTCAACGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACg                                                                                                                                                                                                                                   <  2:853460/190‑1 (MQ=255)               tGCATGTACTGCTTCTCAGGTAGCGCATAAGCCACCTCAACGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACttt                                                                                                                                             <  1:911252/272‑1 (MQ=255)                  aGGTACTGCTTCTCAGGTAGCGCATAAGCCACCTCAACGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCCCCGCGGCGTAAACTTCCAACCCCCACACAATTTCTTTACCGGCCCACCCACCCAATTCATAAGaaaaacatggt                                                                                                                                          >  2:911251/1‑263 (MQ=255)                            tctcAGGTAGCGCATAAGCCACCTCAACGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATAc                                                                                                                                                                                                                                    >  1:908349/1‑172 (MQ=255)                            tctcAGGTAGCGCATAAGCCACCTCAACGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGa                                                                                                                                                                                                                                  >  1:545032/1‑174 (MQ=255)                            tctcAGGTAGCGCATAAGCCACCTCAAAGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCCCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGCTGAAACACGATACGACACACCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGATTACTGTTCaa                                                                                                                                >  1:564493/1‑272 (MQ=255)                             ctcAGGTAGCGCATAAGCCACCTCAACGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACg                                                                                                                                                                                                                                   <  2:908348/172‑1 (MQ=255)                             ctcAGGTAGCGCATAAGCCACCTCAACGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGac                                                                                                                                                                                                                                 <  2:545031/174‑1 (MQ=255)                                aGGTAGCGCATAAGCCACCTCAACGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTCAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGCGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCACAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAAAACTTTGGTTAATGGTCAACTgg                                                                                                                            >  1:238221/1‑272 (MQ=255)                                 ggTAGCGCATAAGCCACCTCAACGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTggatggaagtttacgccgctgagccaggaggcgtgtcgtatcgagtttcatct                                                                                                                                                                                                            >  2:212963‑M1/1‑138 (MQ=255)                                 ggTAGCGCATAAGCCACCTCAACGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGt                                                                                                                           >  1:356815/1‑272 (MQ=255)                                  gTAGCGCATAAGCCACCTCAACGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTggatggaagtttacgccgctgagccaggaggcgtgtcgtatcgagtttcatctc                                                                                                                                                                                                           <  1:212963‑M1/191‑55 (MQ=255)                                                 ccTCAACGGTAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCGGGTAGTAAAc                                                                                                             <  1:173171/270‑1 (MQ=255)                                                     aaCGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCaaa                                                                                                                                                                                                                                                        >  1:715759/1‑127 (MQ=255)                                                      aCGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAg                                                                                                                                                                                                                                                       <  2:715758/127‑1 (MQ=255)                                                          cAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGCGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATAATATGGTTACTGGTCAACTGGTTGCGGGTAGTAAACGtt                                                                                                          >  1:1044195/1‑264 (MQ=255)                                                                               aCCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACg                                                                                                                                                                                                                              >  2:81716/1‑127 (MQ=255)                                                                                ccTCTTCCGCAAGACCCGAAAAAGCCTGGACCATATTCGCCGCCAGCTCTTAAAACACGCGACAAAAGGCGAGTTCAA‑TCAACTTATTGATAAACTCAAAGTCGAGATAAACCTCGATACGACACGc                                                                                                                                                                                                                             <  1:81716/127‑1 (MQ=255)                                                                                   ctTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTggatggaagtttacgccgctgagcca                                                                                                                                                                                                                                       >  1:611913‑M1/1‑88 (MQ=255)                                                                                    tttCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTggatggaagtttacgccgctgagccag                                                                                                                                                                                                                                      <  2:611912‑M1/114‑28 (MQ=255)                                                                                    tttCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCGGGTAGTAAACGTTTTGCTGATCCCAGCCTTAGAGACATCTAccgccg                                                                        >  1:284849/1‑272 (MQ=255)                                                                                       cGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCACAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGCTTCATAAGAATACTTTGGTTACTGGTCAACTGTTTGCGGCTAGTAAACGTTTTGCTGATCACAGCCTTAGAGACATCTCCCGCCGCAg                                                                     >  1:1062908/1‑272 (MQ=255)                                                                                       cGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATAc                                                                                                                                                                                                                                    >  1:183298/1‑113 (MQ=255)                                                                                       cGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTg                                                                                                                                                                               >  2:990679/1‑166 (MQ=255)                                                                                       cGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGaa                                                                                                                                                   >  2:805143/1‑194 (MQ=255)                                                                                       cGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACtt                                                                                                                                              >  2:434529/1‑199 (MQ=255)                                                                                       cGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCGGGTAGTAAACGTTTTGCTg                                                                                                    >  2:732210/1‑241 (MQ=255)                                                                                        gCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACg                                                                                                                                                                                                                                   <  2:183298/113‑1 (MQ=255)                                                                                        gCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGa                                                                                                                                                                              <  1:990680/166‑1 (MQ=255)                                                                                        gCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAAt                                                                                                                                                  <  1:805144/194‑1 (MQ=255)                                                                                        gCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACttt                                                                                                                                             <  1:434530/199‑1 (MQ=255)                                                                                        gCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCGGGTAGTAAACGTTTTGCTGa                                                                                                   <  1:732211/241‑1 (MQ=255)                                                                                        gCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCGGGTAGTAAACGTTTTGCTGATCCCAGCCTTAGAGACATCTACCGCCGCAGt                                                                    <  2:356814/272‑1 (MQ=255)                                                                                        acaacaaccagaaaaGCCTGGACCTTATTAGCCGCAAGCTCTTTAAACGCGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAATTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCGGGTAGTAAACGTTTTGCTGATCCCAGCCTTAGAGACATCTACCGCCGCAGt                                                                    <  2:238221/261‑1 (MQ=255)                                                                                         cACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTg                                                                                                                                                                               >  2:735606/1‑164 (MQ=255)                                                                                          aCGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGa                                                                                                                                                                              <  1:735607/164‑1 (MQ=255)                                                                                                 gTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCtt                                                                                                                                                                                >  2:873994/1‑155 (MQ=255)                                                                                                  tAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTg                                                                                                                                                                               <  1:873995/155‑1 (MQ=255)                                                                                                     aaaacaggACCCTATTTGCCGCCATCTCTTTAAACACGCTACCAAATGCCAGTTCAA‑TCAACCTATTGGTAAACTCAAAGGCGATATTAAACTCGATACGACACGCCTCCTTGCTCAGCGGCGTACACTTCCATCCACCAATCAAATTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGTTCAACTGGTTGCGGGTAGTAAACGTTTTGCTGATCCCAGCCTTAGAGACATCTACCGCCGCAGTCATCTGCCCAGGa                                                       <  1:979165/266‑1 (MQ=255)                                                                                                             aCCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATccacca                                                                                                                                                               >  2:241550/1‑160 (MQ=255)                                                                                                             aCCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCGGGTAGTAAACGTTTTGCTg                                                                                                    >  2:308339/1‑219 (MQ=255)                                                                                                              ccATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAg                                                                                                                                                              <  1:241550/160‑1 (MQ=255)                                                                                                              ccATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCGGGTAGTAAACGTTTTGCTGa                                                                                                   <  1:308340/219‑1 (MQ=255)                                                                                                                         gccAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCGGGTAGTAAACGTTTTGCTGATCCCAGCCTTAGAGACATCTACCGCCGCAg                                                                     >  2:856357/1‑238 (MQ=255)                                                                                                                          ccAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCGGGTAGTAAACGTTTTGCTGATCCCAGCCTTAGAGACATCTACCGCCGCAGt                                                                    <  1:856358/238‑1 (MQ=255)                                                                                                                          ccAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCGGGTAGTAAACGTTTTGCTGATCCCAGCCTTAGAGACATCTACCGCCGCAGTCATCTGCCCAGGAGTGGACTCCAGAATCCGACt                                   >  1:729738/1‑271 (MQ=255)                                                                                                                              ctctTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATAc                                                                                                                                                                                                                                    >  1:34981/1‑74 (MQ=255)                                                                                                                               tctTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACg                                                                                                                                                                                                                                   <  2:34981/74‑1 (MQ=255)                                                                                                                                           cgACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTg                                                                                                                                            >  2:566588/1‑149 (MQ=255)                                                                                                                                            gACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCGCCAGATTCATAAGAATACTTTgg                                                                                                                                           <  1:566589/149‑1 (MQ=255)                                                                                                                                              ccAAAGGCTTTTTCAACTCAACTTATTGGTAAACTCAAAGCACAATGGAAACCCGTTCCGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCGGGTAGTAAACGTTTTGCTGATCCCAGCCTTAGAGACATCTACCGCCGCAGTCATCTGCCCAGGAGTGGACTCCAGAATCCGACTTCCGGTACAACCCGGCaaaa               <  2:1095308/272‑1 (MQ=255)                                                                                                                                                           caa‑tcaaCTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCCATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTTGTCAACTGGTTGCGGGTAGTAAACGTTTTGCTTATCCCAGCCTTAGAAGCATCTACCGCCGCAGTCATATTCCCCGGAGTGGACTCCAGAATCCGACTTCCGGTGACACCCGGACAAAACAGAGGATAAGa  >  1:1095309/1‑271 (MQ=255)                                                                                                                                                           caa‑tcaaCTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCggg                                                                                                                     >  1:222751/1‑156 (MQ=255)                                                                                                                                                            aa‑tcaaCTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCGGgt                                                                                                                    <  2:222751/156‑1 (MQ=255)                                                                                                                                                                           |                                                                                                                                                                                                                                                                GCAGCGTCACTCGCTGCAGGTACTGCTTCTCAGGTAGCGCATAAGCCACCTCAACGGCAATTTTACCTGGCACTGTAAACCTCTTTCGCACGAACCGTAAAAGCCTGGACCATATTAGCCGCCAGCTCTTTAAACACGCGACCAAAGGCGAGTTCAA‑TCAACTTATTGGTAAACTCAAAGTCGAGATGAAACTCGATACGACACGCCTCCTGGCTCAGCGGCGTAAACTTCCATCCACCAATCAATTTCTTGAACGGCCCATCCACCAGATTCATAAGAATACTTTGGTTACTGGTCAACTGGTTGCGGGTAGTAAACGTTTTGCTGATCCCAGCCTTAGAGACATCTACCGCCGCAGTCATCTGCCCAGGAGTGGACTCCAGAATCCGACTTCCGGTACAACCCGGCAAAAACTGAGGATAAGA  >  NC_000913/2754226‑2754650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.