New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207805	39 (0.590)	30 (0.510)	25/296	NT	47.5%	coding (305/630 nt)	ycfK	e14 prophage; protein StfP
	?	NC_000913	= 1209602	31 (0.520)					pseudogene (54/537 nt)	stfE	e14 prophage; putative side tail fiber protein fragment

ATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGG  >  NC_000913/1209355‑1209859                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                   aTCCATGAGCATGTTCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGGATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcg                                                                                                                                                                                                                                            >  1:584595‑M2/1‑248 (MQ=255)    cATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCCGCCAGCCTGTTTGCGGAGTGGCCTAAGGCCACGGAACCGGGGAACCCACACGGAAAGGCAAAGCCCCCCCc‑caacccaaccggtgttgg                                                                                                                                                                                                                                         >  2:13571/1‑263 (MQ=255)                         cATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTAAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCGGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatcc                                                                                                                                                                                                                    >  1:506359‑M2/1‑224 (MQ=255)                             ccccTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagc                                                                                                                                                                                                                                       >  1:609737‑M2/1‑220 (MQ=255)                                 tGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCCACAAACC‑ACGGTTATGAAAATGACAAAATAACAAACAAAAGGcaccaa                                                                                                                                                                                                           >  2:91256/1‑271 (MQ=255)                                    aTACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttc                                                                                                                                                                                                                                             <  2:151184‑M2/236‑24 (MQ=255)                                     tACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcg                                                                                                                                                                                                                                            >  1:151184‑M2/1‑212 (MQ=255)                                            aaTAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCagag                                                                                                                                                                                                                                                                    <  1:420596/205‑1 (MQ=255)                                                  ggcacccGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACCCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattct                                                                                                                                                                                           >  1:13571‑M2/4‑199 (MQ=255)                                                         gTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTa                                                                                                                                                                                   <  1:91256/272‑1 (MQ=255)                                                         gTACCAATCCCCCGCCCGTATGCCCAGCCACGACTAAACCAACCCCGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTGGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTa                                                                                                                                                                                   <  2:134652/272‑1 (MQ=255)                                                                  ccccGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGACGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                                                                                                                          >  1:254473/1‑272 (MQ=255)                                                                  ccccGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATg                                                                                                                                                                                                                  >  2:154819/1‑232 (MQ=255)                                                                   cccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACC‑GGTAATGCAGAGCCTTCGCC‑CAAACCAACGTTTATGAAACTGAAAAAATAAAAAGAAAAAGGCAAAATCACTGCCTTTTACAGGGGGATTTTACAAGCGTaa                                                                                                                                                                         >  2:628417/1‑271 (MQ=255)                                                                   cccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATgg                                                                                                                                                                                                                 <  1:154819/232‑1 (MQ=255)                                                                   cccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAAGCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCCGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATgg                                                                                                                                                                                                                 <  1:175008/232‑1 (MQ=255)                                                                    ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGc                                                                                                                                                                             <  1:628418/267‑1 (MQ=255)                                                                     cgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtt                                                                                                                                                                                                                                   <  1:97400‑M2/213‑34 (MQ=255)                                                                      gccctGCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgttt                                                                                                                                                                                                                                  >  2:97400‑M2/1‑179 (MQ=255)                                                                       cccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                                                                                                                                                                     >  1:134652/1‑272 (MQ=255)                                                                       cccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCAAGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaagttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggatctttgcggcttaacagcagcgcgc                                                                                                                                                                      <  1:939945‑M2/272‑95 (MQ=255)                                                                        ccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTGTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttg                                                                                                                                                                                         >  1:77335‑M2/1‑177 (MQ=255)                                                                          tccttcccaCCCACGACTACACCCACCACGTAAATCAGGCAATTTTGTTGTCGGGAAAGCCGTTGCCAGTGCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaa                                                                                                                                                                   >  2:939944‑M2/5‑175 (MQ=255)                                                                          gTCATCCCATCCACGAATAAACTCACCACGTAAACCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGAAGAAAAAGCGGCACCATTGCATTGCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaa                                                                                                                                                                   >  1:918728‑M2/1‑175 (MQ=255)                                                                             aTCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgcaaaacggaatcttgcggcttaacagtagcgcgcgacatg                                                                                                                                                                <  2:153341‑M2/272‑101 (MQ=255)                                                                                     cACGAATAAACTCTCCACTTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagt                                                                                                                                                        >  1:751709‑M2/1‑164 (MQ=255)                                                                                         aaTAAACTCAACACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaaca                                                                                                                                                   >  1:699013/1‑272 (MQ=255)                                                                                             aaCTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCagag                                                                                                                                                                                                                                                                    <  2:986381/156‑1 (MQ=255)                                                                                                 caccacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgacatcgccaaacggattcttgcggcttaacagcagcgcccgaagggcgggaaggaaaagggcgggg                                                                                                                                            <  2:345918‑M2/272‑121 (MQ=255)                                                                                                   ccacGTAAATCAGGCAATTTATGTGTCGGTTAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCAGTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGa                                                                                                                                         <  2:699012/272‑1 (MQ=255)                                                                                                    cacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgc                                                                                                                                         >  1:153341‑M2/1‑149 (MQ=255)                                                                                                       gTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAACAGGGGGATTTAAAATGCTTAATGGCAATTTAAGCGTAACAACcaaaaaacaaaaaaa                                                                                                                                     >  2:1067050/1‑260 (MQ=255)                                                                                                                 cAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATg                                                                                                                                                                                                                  >  2:701874/1‑185 (MQ=255)                                                                                                                  aaTTTATTTGTTGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGAAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAAc                                                                                                                          <  1:1067051/272‑1 (MQ=255)                                                                                                                  aaTTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGTACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAAc                                                                                                                          <  1:72806/272‑1 (MQ=255)                                                                                                                  aaTTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATgg                                                                                                                                                                                                                 <  1:701875/185‑1 (MQ=255)                                                                                                                  aaTTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAAc                                                                                                                          <  1:173925/272‑1 (MQ=255)                                                                                                                   atttatttGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctg                                                                                                                          >  1:345919‑M2/1‑134 (MQ=255)                                                                                                                       tgttGTCCGATAAGCCTTTGGCATTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCCGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAAt                                                                                                                     <  1:454033/270‑1 (MQ=255)                                                                                                                                     ccTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtt                                                                                                                                                                                                                                   <  2:1058989‑M2/149‑34 (MQ=255)                                                                                                                                      cTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgttt                                                                                                                                                                                                                                  >  1:1058990‑M2/1‑115 (MQ=255)                                                                                                                                                       aTTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAttt                                                                                                                                                                                    >  2:720144/1‑177 (MQ=255)                                                                                                                                                        ttcttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTa                                                                                                                                                                                   <  1:720145/177‑1 (MQ=255)                                                                                                                                                            tcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagag                                                                                                                                                                                                                                        <  2:884531‑M2/121‑29 (MQ=255)                                                                                                                                                             cagcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagc                                                                                                                                                                                                                                       >  1:884532‑M2/1‑92 (MQ=255)                                                                                                                                                                      aaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttc                                                                                                                                                                                                                                             <  1:430256‑M2/106‑24 (MQ=255)                                                                                                                                                                       aGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcg                                                                                                                                                                                                                                            >  2:430255‑M2/1‑82 (MQ=255)                                                                                                                                                                                                              ggCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAg                                                                                                                                                                                                                        >  2:116397/1‑86 (MQ=255)                                                                                                                                                                                                               gCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGc                                                                                                                                                                                                                       <  1:116397/86‑1 (MQ=255)                                                                                                                                                                                                                        cACGGAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcggagtgcggtaaggaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtaggcatcatccagaacggtggcaggcgtgccggtctggggggtaccaag                     <  1:190834‑M2/272‑240 (MQ=255)                                                                                                                                                                                                                            gAACCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgccggtctgggggttaccacgggt                  <  1:546908‑M2/271‑243 (MQ=255)                                                                                                                                                                                                                            gAACCGGGAAACCAACA‑GTTACTGCCGAGccttctcccaaaccaaggttttcgagggccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgccggtctgggggttaccacgggta                 >  2:190834‑M2/1‑29 (MQ=255)                                                                                                                                                                                                                             aaCCGGGACACCAACA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggatt                                                                                                                                                                                             <  1:745016‑M2/99‑72 (MQ=255)                                                                                                                                                                                                                             aaCCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                                                                                                                          >  1:191105/1‑117 (MQ=255)                                                                                                                                                                                                                             aaCCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATg                                                                                                                    >  1:1085692/1‑171 (MQ=255)                                                                                                                                                                                                                              aCCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAt                                                                                                                                                                         <  2:191105/117‑1 (MQ=255)                                                                                                                                                                                                                              aCCGGGAAACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgc                                                                                                                   <  2:1085691/171‑1 (MQ=255)                                                                                                                                                                                                                                   gACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                                                                                                                          >  1:174275/1‑111 (MQ=255)                                                                                                                                                                                                                                   gACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACaa                                                                                                                           >  2:179259/1‑158 (MQ=255)                                                                                                                                                                                                                                    acacCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAt                                                                                                                                                                         <  2:174275/111‑1 (MQ=255)                                                                                                                                                                                                                                    acacCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAAc                                                                                                                          <  1:179259/158‑1 (MQ=255)                                                                                                                                                                                                                                          aCA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtc                                                                           <  1:316758‑M2/200‑186 (MQ=255)                                                                                                                                                                                                                                           cA‑GGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtca                                                                          >  2:316757‑M2/1‑14 (MQ=255)                                                                                                                                                                                                                                            a‑GGTAATGCAGAGccttctcccaaaccacgtttgtcgagagccgttttcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggcttgcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgccggtctgggggttaccacgggtaaaaccgttcttaccc  >  1:986615‑M2/1‑13 (MQ=255)                                                                                                                                                                                                                                                      agagccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctcc                                                                                                           <  2:968567‑M2/157‑154 (MQ=255)                                                                                                                                                                                                                                                      agagccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcc                                                                                                              <  2:578362‑M2/154‑151 (MQ=255)                                                                                                                                                                                                                                                       gagccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatcca                                                          >  1:605481‑M2/1‑3 (MQ=255)                                                                                                                                                                                                                                                       gagccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctcca                                                                                                          >  1:968568‑M2/1‑3 (MQ=255)                                                                                                                                                                                                                                                       gagccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcct                                                                                                             >  1:578363‑M2/1‑3 (MQ=255)                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                   ATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACA‑GGTAATGCAGAGCCTTCTCC‑CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGG  >  NC_000913/1209355‑1209859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.