Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 4,516,664 | C→T | 5.8% | R5H (CGC→CAC) | fecA ← | ferric citrate outer membrane transporter |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,516,664 | 0 | C | T | 5.8% | 351.6 / 9.3 | 104 | R5H (CGC→CAC) | fecA | ferric citrate outer membrane transporter |
Reads supporting (aligned to +/- strand): ref base C (52/46); new base T (3/3); total (55/49) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.08e-01 |
Only 100 of 114 total aligned reads displayed.
TTTACCTGCAGTCCGCTGCCGTCCAGCAGTTGTTGCAGGCCGCTCTCGACGTCGTAATCGCCGTGCAGGCCGTTGCTCTGCTTGCCGCGCGTCAGGCTGGCGTCAACCGAGAGGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTC > NC_000913/4516394‑4516872 | tttCCCTGCAGCCCGCTGCCGTCCAGCAGTTGTTGCAGGCCGCTCTCGACGTCGTAAGCGCCGTGCAGGCCGTTGCTCTGCTTGCCGCGCGTCAGGCTGGCGTCAACCGAGAGGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAAcgcg < 1:762275/272‑1 (MQ=255) ctctCGACGTCGTAATCGCCGTGCAGGCCGTTGCTCTGCTTGCCGCGCGTCAGGCTGGCGTCAACCGAGAGGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAACA‑CGAGAGACCGGCCAGCGGCAGCCGGCTCAGGCGAATGGCGTGAACCCAAGGTGTTGTTTTACGAAAACCGCGTAAAGGCGTCAAACCTTCCACA‑CCTCATTTTTTGTTGTGTTc > 2:327283/1‑272 (MQ=255) tctcGACGTCGTAATCGCCGTGCAGGCCGTTGCTCTGCTTGCCGCGCGTCAGGCTGGCGTCAACCGAGAGGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTtgttgt < 1:327284/267‑1 (MQ=255) aaTCGCCGTGCAGGCCGTTGCTCTGCTTGCCGCGCGTCAGGCTGGCGTCAACCGAGAGGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGGTATTAACCTGGTCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCCCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGGAAAACGCGGAACGGCGTCATACCCTCCCCCTCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGa > 1:42785/1‑272 (MQ=255) aaTCGCCGTGCAGGCCGTTGCTCTGCTTGCCGCGCGTCAGGCTGGCGTCAACCGAGAGGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTTTTGTTTTACGAAAAACGCGTCACGGCGTCATACCCTCCCCAACATCC‑TTTTTGTTGTGTTAAGcgtatagttt > 2:199771/1‑262 (MQ=255) aTCGCCGTGCAGGCCGTTGCTCTGCTTGCCGCGCGTCAGGCTGGCGTCAACCGAGAGGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTtgttgt < 1:199771/254‑1 (MQ=255) tctGCTTGCCGCGCGTCAGGCTGGCGTCAACCGAGAGGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGGTATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGGGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCCTCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGaaa > 1:447419/1‑270 (MQ=255) tctGCTTGCCGCGCGTCAGGCTGGCGTCAACCGAGAGGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGGCATTACTTCCCCATCCTCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGaaa > 1:832642/1‑270 (MQ=255) tctGCTTGCCGCGCGTCAGGCTGGCGTCAACCGAGAGGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCGCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTTAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACa > 1:127753/1‑272 (MQ=255) gCCGCGCGTCAGGCTGGCGTCAACCGAGAGGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAAcgc > 2:813611/1‑188 (MQ=255) cgcgcgTCAGGCTGGCGTCAACCGAGAGGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑tttt > 2:910940/1‑219 (MQ=255) gcgcgTCAGGCTGGCGTCAACCGAGAGGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑ttttt < 1:910941/219‑1 (MQ=255) gagaGGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTttgttg > 1:1033057/1‑201 (MQ=255) agagGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTtgttgt < 2:1033056/201‑1 (MQ=255) gagGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCCCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAgtgg < 1:78402/269‑1 (MQ=255) ggTAATTCGGCGGTGTGGGGATTACT‑TTTGAGGCGCTTTTTCGGGCGATCCCGGTGGGTTATTAACCTGGGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaaa < 2:447418/271‑1 (MQ=255) ggTAAATCCTCTGTGTGCGGCATACTGATTGA‑GCGTTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAACAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaaa < 1:641090/271‑1 (MQ=255) tgtgCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATAcc > 1:95180/1‑161 (MQ=255) gtgCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCt < 2:95180/161‑1 (MQ=255) gtgCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCC‑TTTTTGTTGTGTTCCGCTATGAGTCGAACGAGAAGGGTAAAAAGGAAAAACGAAATAAGAAAAAATTTCCTTACAGTGGTGAAATGttttatcaataca > 2:460712/1‑262 (MQ=255) tgCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaaa < 1:460713/256‑1 (MQ=255) gATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaa > 1:31658/1‑244 (MQ=255) gATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGAACATCGAAATAAGAATTATTTTCCTTACAGTGGTGaa > 1:170957/1‑244 (MQ=255) gATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCCCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGGCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaa > 1:402343/1‑244 (MQ=255) aTTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑ttttt < 2:908547/165‑1 (MQ=255) ttGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCca > 2:432334/1‑153 (MQ=255) ttGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCt > 1:913579/1‑230 (MQ=255) tGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCcat < 1:432335/153‑1 (MQ=255) tGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCtt < 2:913578/230‑1 (MQ=255) tttATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCCGGCTCAGGCGCATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCACCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGGAAAAAGGACAATCGAAATAAGAATTATATTCTTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAAATTTAAc > 1:734444/1‑272 (MQ=255) tttATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑tttt > 1:118177/1‑155 (MQ=255) ttATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑ttttt < 2:118177/155‑1 (MQ=255) tATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTttgttg > 1:571983/1‑158 (MQ=255) tATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTAATACCTTCCCCATCATCA‑TTTTTGTTGTTTTCAGCTATGAGTCGACCGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTctt > 1:273668/1‑218 (MQ=255) aTCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTtgttgt < 2:571982/158‑1 (MQ=255) gATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTttgttg > 2:303542/1‑150 (MQ=255) aTCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTtgttgt < 1:303543/150‑1 (MQ=255) cccGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAAcgc > 2:768785/1‑109 (MQ=255) gttagggtatTAACCTGTGGCGAAAAAGGTGAAAACCGAG‑GACCGGCCGGCGGAACAAGGTTCAGGCGAATGTTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGcgcg < 2:734443/265‑1 (MQ=255) gATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGTGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaa > 1:772424/1‑213 (MQ=255) gATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACg > 1:840258/1‑107 (MQ=255) gATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTttgttg > 1:144286/1‑139 (MQ=255) atatTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGTGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaaa < 2:772423/213‑1 (MQ=255) atatTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACgg < 2:840257/107‑1 (MQ=255) atatTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTtgttgt < 2:144286/139‑1 (MQ=255) agcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCa > 2:448861/1‑98 (MQ=255) agcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCca > 2:912162/1‑109 (MQ=255) agcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCca > 1:84837/1‑109 (MQ=255) agcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑tttt > 2:549191/1‑119 (MQ=255) agcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑tttt > 2:124045/1‑119 (MQ=255) agcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGaa > 1:506351/1‑143 (MQ=255) agcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACgag > 1:1106385/1‑147 (MQ=255) agcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGa > 1:995116/1‑161 (MQ=255) agcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTgc > 2:291864/1‑249 (MQ=255) agcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATc > 1:12894/1‑272 (MQ=255) agcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATc > 1:469627/1‑272 (MQ=255) gcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAAcgcg < 2:484340/86‑1 (MQ=255) gcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCAt < 1:448862/98‑1 (MQ=255) gcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCcat < 2:84837/109‑1 (MQ=255) gcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCcat < 1:912163/109‑1 (MQ=255) gcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑ttttt < 1:549192/119‑1 (MQ=255) gcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAAc < 2:506350/143‑1 (MQ=255) gcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACgaga < 2:1106384/147‑1 (MQ=255) gcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaaa < 1:738515/198‑1 (MQ=255) gcaAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTgcg < 1:291865/249‑1 (MQ=255) caAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAAcgc > 1:916264/1‑84 (MQ=255) aaaaGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAAcgcg < 2:916263/84‑1 (MQ=255) gAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTttgttg > 1:60439/1‑114 (MQ=255) gAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACg > 1:366231/1‑135 (MQ=255) gAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaa > 1:749451/1‑188 (MQ=255) aaaa‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTtgttgt < 2:60439/114‑1 (MQ=255) aaaa‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACga < 2:366230/135‑1 (MQ=255) aaaa‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaaa < 2:749450/188‑1 (MQ=255) gcGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGCGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGTATAGGTTCAGGATCGCCTCGGTATTGTTGAGCGGGAACGTc > 2:182649/2‑272 (MQ=255) ggCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATcc > 1:906979/1‑184 (MQ=255) gCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCcat < 1:512769/85‑1 (MQ=255) gCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCa < 2:906978/184‑1 (MQ=255) ccAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATGGCATCGGTATTTTTCAGCGGGaaa > 1:873543/1‑264 (MQ=255) cGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATcc > 1:1095228/1‑178 (MQ=255) gtgtTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTttgttg > 1:165727/1‑72 (MQ=255) tgtTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGttt < 2:384296/151‑1 (MQ=255) aCCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaa > 2:157927/1‑140 (MQ=255) aCCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTAAAGTGGTGaa > 1:367218/1‑140 (MQ=255) ccAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaaa < 1:157927/140‑1 (MQ=255) tgttgtTTTACGAAAAACGTGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGa > 1:73979/1‑76 (MQ=255) tgttgtTTTACGAAAAACGTGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTAt > 2:534095/1‑140 (MQ=255) tgttgtTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaa > 2:12375/1‑132 (MQ=255) tgttgtTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaa > 2:1063804/1‑132 (MQ=255) tgttgtTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATcc > 2:667743/1‑142 (MQ=255) tgttgtTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTgcgc > 1:666279/1‑185 (MQ=255) gttgttTTACGAAAAACGTGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGaa < 2:73979/76‑1 (MQ=255) gttgttTTACGAAAAACGTGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATc < 1:534096/140‑1 (MQ=255) gttgttTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaaa < 1:1063805/132‑1 (MQ=255) gttgttTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGaaa < 1:12375/132‑1 (MQ=255) gttgttTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCa < 1:667744/142‑1 (MQ=255) gttgttTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGcgcg < 2:666278/185‑1 (MQ=255) gttgttTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCa < 1:1108041/203‑1 (MQ=255) gttgttTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTAtt < 2:210601/211‑1 (MQ=255) gcgTAACGGCGTCATACCTTCCCAATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATcc > 1:1112981/1‑124 (MQ=255) cgTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCa < 2:1112980/124‑1 (MQ=255) | TTTACCTGCAGTCCGCTGCCGTCCAGCAGTTGTTGCAGGCCGCTCTCGACGTCGTAATCGCCGTGCAGGCCGTTGCTCTGCTTGCCGCGCGTCAGGCTGGCGTCAACCGAGAGGGTAAATCCGCTGTGTGCGGCATACTGATTGA‑GCGCTTTATCGAGCGATCCCGGTGCGATATTAACCTGTGCAGCAAAAGCGGAAAA‑CGAGAGACCGGCCAGCGGCAGCAGGCTCAGGCGAATGGTGTTAACCAAAGGTGTTGTTTTACGAAAAACGCGTAACGGCGTCATACCTTCCCCATCATCA‑TTTTTGTTGTGTTCAGCTATGAGTCGAACGAGAAGGGTAAAAAGGACAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTC > NC_000913/4516394‑4516872 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |