Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 229,044 (T)8→7 intergenic (+40/‑123) aspU → / → dkgB tRNA‑Asp/methylglyoxal reductase DkgB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913229,0370T.100.0% 1137.3 / NA 218intergenic (+33/‑130)aspU/dkgBtRNA‑Asp/methylglyoxal reductase DkgB
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (102/116);  total (102/116)

Only 100 of 238 total aligned reads displayed.

GTTCAGTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGGTTTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGAAGCCCATAATCACCTC  >  NC_000913/228937‑229133
                                                                                                    |                                                                                                
 ttCAGTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGGtt                                                                                                 >  2:341695/1‑101 (MQ=255)
  tCAGTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGGttt                                                                                                >  1:341697/1‑101 (MQ=255)
   cAGTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGGtttt                                                                                               >  1:341699/1‑101 (MQ=255)
     gTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGGtttttt                                                                                             <  1:341238/101‑1 (MQ=255)
      tCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGGttttttt                                                                                            <  2:341610/101‑1 (MQ=255)
          ttAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGGtttttttcgtc                                                                                        >  1:341705/1‑97 (MQ=255)
           tAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCt                                                                                      >  2:341706/1‑101 (MQ=255)
             gAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGt                                                                                    <  2:341249/101‑1 (MQ=255)
             gAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGt                                                                                    <  2:341431/101‑1 (MQ=255)
              aaTACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGta                                                                                   <  1:341414/101‑1 (MQ=255)
              aaTACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGta                                                                                   >  2:341711/1‑101 (MQ=255)
               aTACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGtat                                                                                  >  1:341712/1‑101 (MQ=255)
                  cctgcctgTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATc                                                                               <  1:341334/101‑1 (MQ=255)
                   ctgcctgTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCt                                                                              <  1:341340/101‑1 (MQ=255)
                   ctgcctgTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCt                                                                              <  1:341443/101‑1 (MQ=255)
                     gcctgTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCtat                                                                            >  1:341715/1‑101 (MQ=255)
                     gcctgTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCtat                                                                            <  1:341589/101‑1 (MQ=255)
                      cctgTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTatat                                                                                <  2:341478/96‑1 (MQ=255)
                      cctgTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCtatt                                                                           >  2:341717/1‑101 (MQ=255)
                       ctgTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCtatta                                                                          <  1:341264/101‑1 (MQ=255)
                       ctgTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCtatta                                                                          <  2:341350/101‑1 (MQ=255)
                        tgTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCtattat                                                                         <  1:341305/101‑1 (MQ=255)
                        tgTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCtattat                                                                         <  1:341269/101‑1 (MQ=255)
                          tCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTg                                                                       >  2:341720/1‑101 (MQ=255)
                           cACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGc                                                                      <  2:341398/101‑1 (MQ=255)
                             cGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTg                                                                       <  2:341142/98‑1 (MQ=255)
                             cGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCa                                                                    <  1:341387/101‑1 (MQ=255)
                              gCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAg                                                                   >  1:341724/1‑101 (MQ=255)
                               cAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGa                                                                  <  2:341332/101‑1 (MQ=255)
                                aGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGaa                                                                 >  1:341726/1‑101 (MQ=255)
                                  ggggTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGGtttttttcg                                                                                          <  2:341300/75‑3 (MQ=255)
                                  ggggTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATc                                                               <  1:341567/101‑1 (MQ=255)
                                   gggTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCg                                                              <  2:341463/101‑1 (MQ=255)
                                    ggTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGc                                                             <  2:341501/101‑1 (MQ=255)
                                        gcgGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCaaaa                                                         >  1:341729/1‑101 (MQ=255)
                                        gcgGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCaaaa                                                         <  1:341450/101‑1 (MQ=255)
                                          gggTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAAt                                                       >  2:341731/1‑101 (MQ=255)
                                            gTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATcc                                                     >  1:341734/1‑101 (MQ=255)
                                             ttCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAAt                                                                <  2:341289/89‑1 (MQ=255)
                                             ttCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATcc                                                     <  1:341293/100‑1 (MQ=255)
                                              tCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTTtat                                                                                  <  2:341422/70‑1 (MQ=38)
                                              tCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCctc                                                   <  2:341366/101‑1 (MQ=255)
                                              tCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCctc                                                   <  1:341447/101‑1 (MQ=255)
                                              tCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCctc                                                   <  1:341455/101‑1 (MQ=255)
                                               cGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCctct                                                  >  1:341737/1‑101 (MQ=255)
                                               cGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCctct                                                  <  1:341509/101‑1 (MQ=255)
                                                gAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTg                                                 <  1:341120/101‑1 (MQ=255)
                                                gAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTg                                                 >  2:341739/1‑101 (MQ=255)
                                                gAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTg                                                 >  2:341742/1‑101 (MQ=255)
                                                 aggcccGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAAt                                                                <  2:341429/82‑1 (MQ=255)
                                                  gTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTatat                                                                                <  2:341282/68‑1 (MQ=255)
                                                  gTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCa                                               >  1:341743/1‑101 (MQ=255)
                                                    cccGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCAtt                                             <  2:341467/101‑1 (MQ=255)
                                                    cccGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCAtt                                             >  2:341746/1‑101 (MQ=255)
                                                      cgtccgtTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCAtttt                                           <  1:341468/101‑1 (MQ=255)
                                                       gtccgtTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTa                                          >  1:341749/1‑101 (MQ=255)
                                                        tccgtTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTAc                                         >  2:341753/1‑101 (MQ=255)
                                                        tccgtTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTAc                                         <  1:341367/101‑1 (MQ=255)
                                                        tccgtTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTAc                                         >  1:341752/1‑101 (MQ=255)
                                                           gtTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGct                                      <  1:341436/101‑1 (MQ=255)
                                                           gtTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGct                                      >  2:341755/1‑101 (MQ=255)
                                                             tCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGctct                                    <  2:341317/101‑1 (MQ=255)
                                                              ccGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCtt                                   >  2:341758/1‑101 (MQ=255)
                                                              ccGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCtt                                   >  1:341760/1‑101 (MQ=255)
                                                               cGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCAtttt                                           <  2:341539/92‑1 (MQ=255)
                                                                gCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCtttt                                 >  1:341762/1‑101 (MQ=255)
                                                                gCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCtttt                                 >  1:341765/1‑101 (MQ=255)
                                                                 ccACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCttttt                                <  1:341487/101‑1 (MQ=255)
                                                                  cACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTc                               >  2:341767/1‑101 (MQ=255)
                                                                  cACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTc                               <  1:341203/101‑1 (MQ=255)
                                                                  cACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTc                               >  2:341769/1‑101 (MQ=255)
                                                                  cACTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTc                               <  2:341483/101‑1 (MQ=255)
                                                                   aCTTATTAAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTcc                              <  1:341331/101‑1 (MQ=255)
                                                                    cTTATTAAGAAGCCTCGAGTTAACGCTCGAGGtttttt                                                                                             <  1:341656/38‑1 (MQ=255)
                                                                     ttattaAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTc                            >  2:341772/1‑101 (MQ=255)
                                                                      tattaAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCa                           >  1:341775/1‑101 (MQ=255)
                                                                       attaAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCaa                          <  1:341070/101‑1 (MQ=255)
                                                                       attaAGAAGCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCa                           >  1:341777/1‑100 (MQ=255)
                                                                          aagaagCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAg                       <  2:341725/101‑1 (MQ=255)
                                                                           agaagCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGt                      >  2:341782/1‑101 (MQ=255)
                                                                            gaagCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTc                     >  1:341783/1‑101 (MQ=255)
                                                                             aagCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCt                    >  2:341785/1‑101 (MQ=255)
                                                                              agCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTg                   >  1:341787/1‑101 (MQ=255)
                                                                               gCCTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGa                  <  1:341405/101‑1 (MQ=255)
                                                                                ccTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGaa                 <  1:341424/101‑1 (MQ=255)
                                                                                ccTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGaa                 >  2:341790/1‑101 (MQ=255)
                                                                                 cTCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGAAg                <  1:341439/101‑1 (MQ=255)
                                                                                  tCGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGAAGc               >  1:341793/1‑101 (MQ=255)
                                                                                   cGAGTTAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGAAGcc              >  2:341794/1‑101 (MQ=255)
                                                                                       ttAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGAAGCCCATa          <  1:341363/101‑1 (MQ=255)
                                                                                        tAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGAAGCCCATaa         >  2:341799/1‑101 (MQ=255)
                                                                                        tAACGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGAAGCCCATaa         >  1:341798/1‑101 (MQ=255)
                                                                                         aaCGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCctct                                                  <  1:341535/59‑1 (MQ=255)
                                                                                          aCGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCtttt                                 <  1:341380/75‑1 (MQ=255)
                                                                                          aCGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGAAGCCCATAATc       >  2:341803/1‑101 (MQ=255)
                                                                                          aCGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGAAGCCCATAATc       <  1:341369/101‑1 (MQ=255)
                                                                                          aCGCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGAAGCCCATAATc       <  2:341663/101‑1 (MQ=255)
                                                                                            gCTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGAAGCCCATAATCAc     >  1:341804/1‑101 (MQ=255)
                                                                                             cTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGAAGCCCATAATCAcc    >  2:341806/1‑101 (MQ=255)
                                                                                             cTCGAGG‑TTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGAAGCCCATAATCAcc    >  1:341808/1‑101 (MQ=255)
                                                                                                    |                                                                                                
GTTCAGTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACTTATTAAGAAGCCTCGAGTTAACGCTCGAGGTTTTTTTTCGTCTGTATATCTATTATTGCCAGAATCGCAAAAATCCTCTGCATTTTACGCTCTTTTTCCTCAACAGTCTGAAGCCCATAATCACCTC  >  NC_000913/228937‑229133

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑