| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,106,518 | (C)6→7 | coding (709/1167 nt) | wbbH ← | putative O‑antigen polymerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,106,512 | 1 | . | C | 99.3% | 1215.5 / ‑0.4 | 287 | coding (715/1167 nt) | wbbH | putative O‑antigen polymerase |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (145/140); total (146/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 329 total aligned reads displayed.
CAAAAGACATGAGAACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑CCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTACTCTATTAACAC > NC_000913/2106412‑2106607 | cAAAAGACATGAGAACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑At < 1:3066353/101‑1 (MQ=255) aaaaGACATGAGAACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑c < 1:3066224/101‑1 (MQ=255) aaaaGACATGAGAACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑c > 2:3066865/1‑101 (MQ=255) aaGACATGAGAACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑ccc < 1:3066520/101‑1 (MQ=255) aGACATGAGAACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑cccc > 1:3066869/1‑101 (MQ=255) aGACATGAGAACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑cccc < 2:3066466/101‑1 (MQ=255) aGACATGAGAACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑cccc < 2:3066545/101‑1 (MQ=255) gACATGAGAACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑ccccc > 2:3066871/1‑101 (MQ=255) cATGAGAACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑ccccccc < 2:3066194/101‑2 (MQ=255) aTGAGAACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑ccccccca < 1:3066312/101‑3 (MQ=255) aTGAGAACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑ccccccca > 1:3066877/1‑99 (MQ=255) tGAGAACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑cccccccag > 2:3066878/1‑98 (MQ=255) agaACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑cccccccaggc < 1:3066409/101‑6 (MQ=255) agaACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑cccccccaggc > 1:3066883/1‑96 (MQ=255) aaCTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAg > 1:3066886/1‑101 (MQ=255) aaCTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAg < 2:3066285/101‑1 (MQ=255) aaCTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAg < 1:3066365/101‑1 (MQ=255) cTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTc < 1:3066581/101‑1 (MQ=255) tGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTcc > 2:3066890/1‑101 (MQ=255) tGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTcc < 2:3066335/101‑1 (MQ=255) gCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCAc < 1:3066457/101‑1 (MQ=255) gCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCAc < 1:3066384/101‑1 (MQ=255) cAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACg < 2:3065939/101‑1 (MQ=255) agagTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGt > 2:3066893/1‑101 (MQ=255) agagTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGt > 1:3066894/1‑101 (MQ=255) agTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTaa > 2:3066900/1‑101 (MQ=255) agTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTaa < 1:3066571/101‑1 (MQ=255) agTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTaa < 1:3066494/101‑1 (MQ=255) gTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTaaa < 2:3066321/101‑1 (MQ=255) ttAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGt > 1:3066902/1‑91 (MQ=255) gATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAaga < 1:3066401/101‑1 (MQ=255) gATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAaga > 1:3066906/1‑101 (MQ=255) aTACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAagag < 1:3066477/101‑1 (MQ=255) aTACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑cc < 2:3066486/75‑1 (MQ=255) tACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGc > 1:3066909/1‑101 (MQ=255) cTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCat < 1:3066288/101‑1 (MQ=255) ttGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCata > 2:3066912/1‑101 (MQ=255) tGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCatat > 1:3066915/1‑101 (MQ=255) tGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACa < 2:3066671/101‑1 (MQ=255) tGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACa > 1:3066920/1‑101 (MQ=255) gAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACaa > 2:3066923/1‑101 (MQ=255) aaaTAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAgg > 1:3066925/1‑101 (MQ=255) aaTAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGga < 1:3066532/101‑1 (MQ=255) aTAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGgag < 2:3066150/101‑1 (MQ=255) aTAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGgag < 2:3066326/101‑1 (MQ=255) aTAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGgag < 1:3066240/101‑1 (MQ=255) aTAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑ccccc > 1:3066929/1‑65 (MQ=255) tAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGgaga > 2:3066931/1‑101 (MQ=255) aaaaCTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTaaa > 1:3066934/1‑81 (MQ=255) aaaCTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGTTAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAAt < 1:3066179/101‑1 (MQ=255) aaCTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATa > 2:3066939/1‑101 (MQ=255) aaCTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATa < 2:3066370/101‑1 (MQ=255) aaCTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATa < 2:3066388/101‑1 (MQ=255) aCTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAg > 2:3066943/1‑101 (MQ=255) cTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGa < 2:3066434/101‑1 (MQ=255) cTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGa > 1:3066944/1‑101 (MQ=255) tCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGaa < 2:3066453/101‑1 (MQ=255) tCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGaa < 2:3066231/101‑1 (MQ=255) ccTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAac > 2:3066947/1‑101 (MQ=255) aaaCGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGCATAGAACACCt < 1:3066397/101‑1 (MQ=255) aaaCGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCt > 2:3066951/1‑101 (MQ=255) aaCGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTa < 1:3066857/101‑1 (MQ=255) cgcgATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACa > 1:3066953/1‑101 (MQ=255) cgATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGc > 2:3066959/1‑101 (MQ=255) gATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCt > 1:3066961/1‑101 (MQ=255) aTTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTg > 2:3066965/1‑101 (MQ=255) tataGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGta < 1:3066651/101‑1 (MQ=255) tataGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGta > 1:3066967/1‑101 (MQ=255) ataGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGtaa > 2:3066970/1‑101 (MQ=255) aGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGtaata > 1:3066976/1‑101 (MQ=255) aGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGtaata < 1:3066429/101‑1 (MQ=255) aGGGCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGtaata < 2:3066414/101‑1 (MQ=255) gggCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGtaataa < 2:3066510/101‑1 (MQ=255) ggCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAg < 2:3066560/101‑1 (MQ=255) ggCTGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAg < 1:3066621/101‑1 (MQ=255) tGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATa > 1:3066982/1‑101 (MQ=255) tGACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATa > 2:3066981/1‑101 (MQ=255) gACCAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATaa < 1:3066700/101‑1 (MQ=255) ccAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAACAGCGCATATACAAGGAGAATAGAacac > 1:3066988/1‑79 (MQ=255) ccAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAAc < 1:3066637/101‑1 (MQ=255) ccAAATACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAAc > 2:3066986/1‑101 (MQ=255) aaaTACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACAt > 2:3066991/1‑101 (MQ=255) aaTACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATa > 2:3066994/1‑101 (MQ=255) tACATTGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAAt > 1:3067001/1‑101 (MQ=255) tACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGga < 1:3066106/63‑1 (MQ=255) tACATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAAt > 2:3066999/1‑101 (MQ=255) cATGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGt > 2:3067004/1‑101 (MQ=255) aTGGATAGATAATATGCCAAC‑CCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAac < 2:3066458/69‑1 (MQ=255) tGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGttt < 2:3066496/101‑1 (MQ=255) tGGATAGATAATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGttt > 2:3067008/1‑101 (MQ=255) atagataATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTAc < 2:3066629/101‑1 (MQ=255) atagataATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTAc > 1:3067012/1‑101 (MQ=255) tagataATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTAct < 2:3066831/101‑1 (MQ=255) agataATATGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTActc > 2:3067016/1‑101 (MQ=255) taataTGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTACTCTAt > 2:3067020/1‑101 (MQ=255) aataTGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTACTCTAtt > 2:3067025/1‑101 (MQ=255) aataTGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTACTCTAtt > 1:3067021/1‑101 (MQ=255) atatGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTACTCTATTa < 1:3066514/101‑1 (MQ=255) tatGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTACTCTATTaa < 1:3066544/101‑1 (MQ=255) atGCC‑ATCCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTACTCTATTAac > 1:3067027/1‑101 (MQ=255) | CAAAAGACATGAGAACTGGCAGAGTTAGATACTTGCTGAAAATAAAACTCCTGAAACGCGATTATAGGGCTGACCAAATACATGGATAGATAATATGCC‑AT‑CCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTACTCTATTAACAC > NC_000913/2106412‑2106607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |