New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 70046 =289 (1.000)273 (0.970) 145/188 0.1 66.1% coding (3/1701 nt) araB ribulokinase
?NC_000913 2857096 = 0 (0.000)coding (4/2562 nt) mutS DNA mismatch repair protein MutS

Only 100 of 289 total aligned reads displayed.

AAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATGGGTGA  >  NC_000913/2856996‑2857196
                                                                                                    |                                                                                                    
gcatttttatccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatga                                                                                                      <  1:104807‑M2/1‑1 (MQ=255)
 catttttatccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAg                                                                                                     >  1:104816‑M2/100‑101 (MQ=255)
  atttttatccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGt                                                                                                    >  1:104823‑M2/99‑101 (MQ=255)
  atttttatccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGt                                                                                                    <  2:104821‑M2/3‑1 (MQ=255)
  atttttatccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGt                                                                                                    <  2:104818‑M2/3‑1 (MQ=255)
   tttttatccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTg                                                                                                   >  2:104828‑M2/98‑101 (MQ=255)
   tttttatccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTg                                                                                                   <  2:104825‑M2/4‑1 (MQ=255)
    ttttatccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGc                                                                                                  >  2:104832‑M2/97‑101 (MQ=255)
      ttatccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCaa                                                                                                >  1:104834‑M2/95‑101 (MQ=255)
        atccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATa                                                                                              >  2:104839‑M2/93‑101 (MQ=255)
          ccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGa                                                                                            >  1:104841‑M2/91‑101 (MQ=255)
           cataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGaa                                                                                           >  1:104845‑M2/90‑101 (MQ=255)
            ataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGaaa                                                                                          >  2:104849‑M2/89‑101 (MQ=255)
            ataagactagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGaaa                                                                                          >  1:104848‑M2/89‑101 (MQ=255)
             taagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGaaaa                                                                                         >  2:104852‑M2/88‑101 (MQ=255)
               agattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAAtt                                                                                       <  2:104856‑M2/16‑1 (MQ=255)
                gattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAAttt                                                                                      >  2:104859‑M2/85‑101 (MQ=255)
                 attagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTc                                                                                     >  1:104862‑M2/84‑101 (MQ=255)
                  ttagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCg                                                                                    >  2:104864‑M2/83‑101 (MQ=255)
                   tagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTg                                                                                                   >  2:104867‑M2/82‑85 (MQ=255)
                    agcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgttcttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGac                                                                                  >  1:104870‑M2/81‑101 (MQ=255)
                     gcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGacg                                                                                 >  1:104874‑M2/80‑101 (MQ=255)
                      cggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGacgc                                                                                <  1:104876‑M2/23‑1 (MQ=255)
                      cggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGacgc                                                                                <  2:104877‑M2/23‑1 (MQ=255)
                         atcctacctgacgctttttatcgcaactctctactgtttctccatacccgttttttttgatggagtgaaacgatgAGTGCAATAGAAAATTTCGacgccca                                                                             >  1:104881‑M2/76‑101 (MQ=255)
                         atcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGacgccca                                                                             <  1:104884‑M2/26‑1 (MQ=255)
                          tcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGacgcccat                                                                            >  2:104887‑M2/75‑101 (MQ=255)
                            ctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGacgcccatac                                                                          >  1:104891‑M2/73‑101 (MQ=255)
                             tacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGacgcccatacg                                                                         <  2:104894‑M2/30‑1 (MQ=255)
                             tacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGacgcccatacg                                                                         >  1:104896‑M2/72‑101 (MQ=255)
                               cctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGacgcccatacgcc                                                                       <  2:104900‑M2/32‑1 (MQ=255)
                                ctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGacgcccatacgccc                                                                      >  1:104903‑M2/69‑101 (MQ=255)
                                ctgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGacgcccatacgcc                                                                       >  2:104905‑M2/69‑100 (MQ=255)
                                 tgacgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGa                                                                                   >  1:104909‑M2/68‑87 (MQ=255)
                                   acgctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCatg                                                                   >  2:104910‑M2/66‑101 (MQ=255)
                                     gctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgat                                                                 <  1:104918‑M2/38‑1 (MQ=255)
                                     gctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgat                                                                 <  2:104915‑M2/38‑1 (MQ=255)
                                      ctttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgatg                                                                <  2:104919‑M2/39‑1 (MQ=255)
                                       tttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGacgcccatacgccca                                                                     >  2:104921‑M2/62‑95 (MQ=255)
                                       tttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATgc                                                               >  1:104927‑M2/62‑101 (MQ=255)
                                       tttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATgc                                                               >  2:104925‑M2/62‑101 (MQ=255)
                                        ttttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATgca                                                              <  2:104930‑M2/41‑1 (MQ=255)
                                         tttatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATgcag                                                             >  2:104934‑M2/60‑101 (MQ=255)
                                           tatcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATgcagca                                                           <  1:104937‑M2/44‑1 (MQ=255)
                                            atcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGcagcag                                                          <  2:104939‑M2/45‑1 (MQ=255)
                                             tcgcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGt                                                         >  1:104942‑M2/56‑101 (MQ=255)
                                               gcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAt                                                       >  1:4157999‑M2/54‑101 (MQ=255)
                                               gcaactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAt                                                       <  2:104945‑M2/48‑1 (MQ=255)
                                                caactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtc                                                      >  2:4157997‑M2/53‑101 (MQ=255)
                                                 aactctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct                                                     >  1:4157995‑M2/52‑101 (MQ=255)
                                                  actctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtctc                                                    <  1:105748‑M2/51‑1 (MQ=255)
                                                   ctctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCa                                                   >  1:4157991‑M2/50‑101 (MQ=255)
                                                   ctctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCa                                                   <  2:105872‑M2/52‑1 (MQ=255)
                                                   ctctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCa                                                   >  2:4157989‑M2/50‑101 (MQ=255)
                                                    tctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAg                                                  <  2:106142‑M2/53‑1 (MQ=255)
                                                     ctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAgg                                                 <  1:106185‑M2/54‑1 (MQ=255)
                                                     ctctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAgg                                                 >  1:4157985‑M2/48‑101 (MQ=255)
                                                      tctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGc                                                <  2:105773‑M2/55‑1 (MQ=255)
                                                      tctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGc                                                >  1:4157982‑M2/47‑101 (MQ=255)
                                                       ctactgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCt                                               <  2:106210‑M2/56‑1 (MQ=255)
                                                           tgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGaaa                                           <  1:105945‑M2/60‑1 (MQ=255)
                                                           tgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGaaa                                           <  2:106055‑M2/60‑1 (MQ=255)
                                                           tgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGaaa                                           <  2:105964‑M2/60‑1 (MQ=255)
                                                           tgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGaaa                                           <  2:105846‑M2/60‑1 (MQ=255)
                                                           tgtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGaaa                                           >  2:4157978‑M2/42‑101 (MQ=255)
                                                            gtttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAg                                          >  1:4157976‑M2/41‑101 (MQ=255)
                                                             tttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGc                                         >  1:4157973‑M2/40‑101 (MQ=255)
                                                              ttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGcc                                        <  2:105614‑M2/63‑1 (MQ=255)
                                                              ttctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGcc                                        >  2:4157972‑M2/39‑101 (MQ=255)
                                                                ctccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCa                                      <  2:105656‑M2/65‑1 (MQ=255)
                                                                 tccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAg                                     >  2:4157969‑M2/36‑101 (MQ=255)
                                                                  ccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGc                                    <  2:105747‑M2/67‑1 (MQ=255)
                                                                  ccatacccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGc                                    >  2:4157965‑M2/35‑101 (MQ=255)
                                                                        ccgtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCg                              >  2:4157962‑M2/29‑101 (MQ=255)
                                                                          gtttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCgag                            >  2:4157958‑M2/27‑101 (MQ=255)
                                                                           tttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCgaga                           <  1:105908‑M2/76‑1 (MQ=255)
                                                                           tttttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCgaga                           >  1:4157957‑M2/26‑101 (MQ=255)
                                                                             tttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATc                         >  2:4157953‑M2/24‑101 (MQ=255)
                                                                              ttttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATcc                        >  1:4157952‑M2/23‑101 (MQ=255)
                                                                               tttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCct                       <  1:105730‑M2/80‑1 (MQ=255)
                                                                               tttggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCct                       >  2:4157949‑M2/22‑101 (MQ=255)
                                                                                 tggatggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCctgc                     >  2:4157946‑M2/20‑101 (MQ=255)
                                                                                     tggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGtt                 >  2:4157941‑M2/16‑101 (MQ=255)
                                                                                      ggagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGttt                <  2:105557‑M2/87‑1 (MQ=255)
                                                                                       gagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGtttt               <  1:105874‑M2/88‑1 (MQ=255)
                                                                                       gagtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGtttt               <  1:105689‑M2/88‑1 (MQ=255)
                                                                                         gtgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTAc             <  1:105529‑M2/90‑1 (MQ=255)
                                                                                          tgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTAcc            >  1:4157939‑M2/11‑101 (MQ=255)
                                                                                          tgaaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTAcc            >  2:4157936‑M2/11‑101 (MQ=255)
                                                                                            aaacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCgg          >  2:4157932‑M2/9‑101 (MQ=255)
                                                                                             aacgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGa         >  1:4157930‑M2/8‑101 (MQ=255)
                                                                                               cgatgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATg       >  2:4157928‑M2/6‑101 (MQ=255)
                                                                                                 atgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATggg     <  1:105463‑M2/98‑1 (MQ=255)
                                                                                                 atgAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATggg     <  2:105348‑M2/98‑1 (MQ=255)
                                                                                                   gAGTGCAATAGAAAATTTCGACGCCCATACGCGCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATGGGTg   <  1:105599‑M2/100‑1 (MQ=255)
                                                                                                   gAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATGGGTg   <  1:105175‑M2/100‑1 (MQ=255)
                                                                                                   gAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATGGGTg   >  2:4158003‑M2/2‑101 (MQ=255)
                                                                                                    aGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATGGGTGa  <  2:105705/101‑1 (MQ=255)
                                                                                                    aGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATGGGTGa  <  2:105195/101‑1 (MQ=255)
                                                                                                    aGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATGGGTGa  >  1:4158005/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
AAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATGGGTGA  >  NC_000913/2856996‑2857196

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.