BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,490,614	G→A	L176L (CTG→TTG)	idnR ←	DNA‑binding transcriptional dual regulator IdnR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,490,614	0	G	A	100.0%	1203.5 / NA	282	L176L (CTG→TTG)	idnR	DNA‑binding transcriptional dual regulator IdnR
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (157/125); total (157/125)

Only 100 of 282 total aligned reads displayed.

CAGCATCATCGCATCGCAATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAGCATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAATTCCACGACCGGA  >  NC_000913/4490516‑4490711

cagcaTCATCGCATCGCAATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACa                                                                                                 <  2:6656121/101‑1 (MQ=255)

 agcaTCATCGCATCGCAATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACAt                                                                                                <  2:6656006/101‑1 (MQ=255)

 agcaTCATCGCATCGCAATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACAt                                                                                                <  1:6656297/101‑1 (MQ=255)

 agcaTCATCGCATCGCAATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACAt                                                                                                >  1:6656552/1‑101 (MQ=255)

   catcatCGCATCGCAATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATgg                                                                                              <  2:6656167/101‑1 (MQ=255)

      catcgcatcgCAATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTac                                                                                           >  1:6656557/1‑101 (MQ=255)

        tcgcatcgcaATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTacac                                                                                         <  2:6656045/101‑1 (MQ=255)

         cgcatcgcaATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTacaca                                                                                        >  1:6656559/1‑101 (MQ=255)

          gcatcgcaATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTacacac                                                                                       >  1:6656563/1‑101 (MQ=255)

           catcgcaATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACAcc                                                                                      >  2:6656564/1‑101 (MQ=255)

             tcgcaATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCAt                                                                                    >  2:6656569/1‑101 (MQ=255)

             tcgcaATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCAt                                                                                    <  2:6656221/101‑1 (MQ=255)

              cgcaATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATg                                                                                   >  1:6656570/1‑101 (MQ=255)

               gcaATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATgg                                                                                              <  2:6656141/89‑1 (MQ=255)

                caATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTc                                                                                 >  1:6656575/1‑101 (MQ=255)

                caATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTc                                                                                 >  2:6656577/1‑101 (MQ=255)

                  aTACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCaa                                                                               >  1:6656580/1‑101 (MQ=255)

                  aTACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCaa                                                                               >  2:6656583/1‑101 (MQ=255)

                   tACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCaaa                                                                              <  1:6655872/101‑1 (MQ=255)

                    aCCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCaaaa                                                                             <  2:6656179/101‑1 (MQ=255)

                    aCCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCaaaa                                                                             <  1:6656177/101‑1 (MQ=255)

                    aCCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCaaaa                                                                             <  1:6655914/101‑1 (MQ=255)

                    aCCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCaaaa                                                                             >  1:6656585/1‑101 (MQ=255)

                     ccccTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAg                                                                            >  2:6656588/1‑101 (MQ=255)

                     ccccTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAg                                                                            <  1:6656105/101‑1 (MQ=255)

                     ccccTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAg                                                                            >  1:6656589/1‑101 (MQ=255)

                       ccTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCg                                                                          <  1:6656064/101‑1 (MQ=255)

                        cTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCgg                                                                         >  1:6656593/1‑101 (MQ=255)

                           aTAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCt                                                                      >  2:6656595/1‑101 (MQ=255)

                            tAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTg                                                                     >  1:6656599/1‑101 (MQ=255)

                            tAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTg                                                                     >  2:6656601/1‑101 (MQ=255)

                              aCGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGcc                                                                   <  1:6656212/101‑1 (MQ=255)

                              aCGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGcc                                                                   <  1:6656455/101‑1 (MQ=255)

                              aCGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGcc                                                                   >  2:6656605/1‑101 (MQ=255)

                               cGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCg                                                                  >  2:6656609/1‑101 (MQ=255)

                                gCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGa                                                                 >  1:6656613/1‑101 (MQ=255)

                                gCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGa                                                                 <  1:6655958/101‑1 (MQ=255)

                                 cTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGcc                                                                       <  1:6656390/94‑1 (MQ=255)

                                 cTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGAt                                                                >  2:6656614/1‑101 (MQ=255)

                                 cTGTTCATCGCGGGGGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATg                                                                                   >  2:6656616/1‑82 (MQ=255)

                                    ttCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTAt                                                             <  1:6656338/101‑1 (MQ=255)

                                      cATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCa                                                           <  2:6656246/101‑1 (MQ=255)

                                      cATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCa                                                           >  1:6656622/1‑101 (MQ=255)

                                      cATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCa                                                           >  1:6656624/1‑101 (MQ=255)

                                       aTCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCaa                                                          >  2:6656626/1‑101 (MQ=255)

                                         cgcgGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCaaaa                                                        >  1:6656629/1‑101 (MQ=255)

                                          gcgGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAAc                                                       >  2:6656633/1‑101 (MQ=255)

                                           cgGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACCCCATGTCAAAAGCGGCCTGCCGATTATCaa                                                          <  2:6656026/97‑1 (MQ=255)

                                           cgGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAAcc                                                      >  2:6656636/1‑101 (MQ=255)

                                            gggTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCg                                                     <  1:6656270/101‑1 (MQ=255)

                                            gggTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCg                                                     >  1:6656638/1‑101 (MQ=255)

                                            gggTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCg                                                     >  2:6656640/1‑101 (MQ=255)

                                             ggTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGa                                                    >  2:6656642/1‑101 (MQ=255)

                                             ggTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGa                                                    <  1:6656245/101‑1 (MQ=255)

                                             ggTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGa                                                    <  2:6656198/101‑1 (MQ=255)

                                               tgtCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGAcc                                                  <  2:6656207/101‑1 (MQ=255)

                                                gtCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCt                                                 >  1:6656646/1‑101 (MQ=255)

                                                  cATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCCTGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTcc                                               >  2:6656649/1‑101 (MQ=255)

                                                    tCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCat                                             <  1:6655993/101‑1 (MQ=255)

                                                     cTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCata                                            <  1:6656078/101‑1 (MQ=255)

                                                     cTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCata                                            >  1:6656653/1‑101 (MQ=255)

                                                     cTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCata                                            <  2:6656333/101‑1 (MQ=255)

                                                     cTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCata                                            <  1:6656284/101‑1 (MQ=255)

                                                      tttGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCatat                                           >  2:6656654/1‑101 (MQ=255)

                                                       ttGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATc                                          <  1:6656013/101‑1 (MQ=255)

                                                        tGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATcc                                         <  1:6656131/101‑1 (MQ=255)

                                                         ggAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCa                                        <  1:6656049/101‑1 (MQ=255)

                                                          gAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAg                                       <  2:6656081/101‑1 (MQ=255)

                                                            aCCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGcc                                     >  2:6656660/1‑101 (MQ=255)

                                                            aCCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGcc                                     >  1:6656659/1‑101 (MQ=255)

                                                               gataTACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGtt                                  >  1:6656663/4‑101 (MQ=255)

                                                                agaTACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCaaa                                                                              >  2:6656665/1‑56 (MQ=255)

                                                                  aTACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAATACCGACCTCCATATCCa                                        >  1:6656669/1‑92 (MQ=255)

                                                                   tACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGt                                                                                             <  2:6656073/38‑1 (MQ=255)

                                                                   tACAGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGCCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTcc                              <  2:6656291/101‑1 (MQ=255)

                                                                      aGAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTg                           >  1:6656673/1‑101 (MQ=255)

                                                                       gAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGt                          >  2:6656677/1‑101 (MQ=255)

                                                                       gAATTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGt                          >  1:6656676/1‑101 (MQ=255)

                                                                         aTTTTGTGCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTAc                        <  1:6656231/101‑1 (MQ=255)

                                                                             tgtgCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTAcatcc                    <  2:6656101/101‑1 (MQ=255)

                                                                               ttccTGACTCGCTTCTCCAACATGGTACACACCATGTCaaaa                                                                             <  2:6655936/40‑1 (MQ=255)

                                                                                gCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTAcatccatc                 >  2:6656681/1‑101 (MQ=255)

                                                                                gCCTGACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTAcatccatc                 >  1:6656682/1‑101 (MQ=255)

                                                                                    gACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAAtt             <  1:6656241/101‑1 (MQ=255)

                                                                                    gACTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAAtt             >  2:6656687/1‑101 (MQ=255)

                                                                                     aCTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAATTc            >  1:6656688/1‑101 (MQ=255)

                                                                                     aCTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAATTc            <  1:6656236/101‑1 (MQ=255)

                                                                                     aCTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAATTc            <  1:6656170/101‑1 (MQ=255)

                                                                                      cTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCaa               <  2:6656505/97‑1 (MQ=255)

                                                                                      cTCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAATTc            >  2:6656692/1‑100 (MQ=255)

                                                                                       tCGCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAATTCCa          >  1:6656694/1‑101 (MQ=255)

                                                                                         gCTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAATTCCACg        >  2:6656698/1‑101 (MQ=255)

                                                                                          cTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAATTCCACGa       >  1:6656701/1‑101 (MQ=255)

                                                                                          cTTCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAATTCCACGa       <  1:6656195/101‑1 (MQ=255)

                                                                                           ttCTCCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAATTCCACGAc      >  2:6656703/1‑101 (MQ=255)

                                                                                            tctcCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAATTCCACGAcc     <  2:6656436/101‑1 (MQ=255)

                                                                                            tctcCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAATTCCACGAcc     <  1:6656189/101‑1 (MQ=255)

                                                                                             ctcCAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAATTCCACGACCg    >  1:6656705/1‑101 (MQ=255)

                                                                                               ccAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTAt                                                             <  1:6656149/42‑1 (MQ=255)

                                                                                               ccAACATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAATTCCACGACCGGa  >  1:6656710/1‑101 (MQ=255)

CAGCATCATCGCATCGCAATACCCCTGATAACGCTGTTCATCGCGGGTGTCATCTTTGGAACCGAGATACAGAATTTTGTGCCTGACTCGCTTCTCCAGCATGGTACACACCATGTCAAAAGCGGCCTGCCGATTATCAAAACCGACCTCCATATCCAGCCGTTCTCCCTGTACATCCATCAATTCCACGACCGGA  >  NC_000913/4490516‑4490711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`