BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	665,013	C→T	D60N (GAT→AAT)	rlpA ←	rare lipoprotein RlpA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	665,013	0	C	T	100.0%	1093.6 / NA	254	D60N (GAT→AAT)	rlpA	rare lipoprotein RlpA
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (135/119); total (135/119)

Only 100 of 254 total aligned reads displayed.

CTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACC  >  NC_000913/664916‑665110

cTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTg                                                                                                <  2:994668/101‑1 (MQ=255)

cTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTg                                                                                                <  2:994684/101‑1 (MQ=255)

 tGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGa                                                                                               >  2:995067/1‑101 (MQ=255)

  gCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGAt                                                                                              >  1:995069/1‑101 (MQ=255)

  gCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGAt                                                                                              <  1:994659/101‑1 (MQ=255)

    cGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGAttt                                                                                            <  1:994650/101‑1 (MQ=255)

     gggTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTg                                                                                           >  1:995072/1‑101 (MQ=255)

         tCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGAttt                                                                                            >  1:995076/1‑96 (MQ=255)

          cGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTc                                                                                      >  2:995077/1‑101 (MQ=255)

          cGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTc                                                                                      <  1:994749/101‑1 (MQ=255)

             catcatAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTcgcg                                                                                   >  1:995079/1‑101 (MQ=255)

              atcatAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGt                                                                                  >  1:995083/1‑101 (MQ=255)

               tcatAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGtt                                                                                 >  2:995085/1‑101 (MQ=255)

                 atAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCa                                                                               <  1:994689/101‑1 (MQ=255)

                 atAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCa                                                                               <  2:994965/101‑1 (MQ=255)

                 atAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCa                                                                               <  1:994628/101‑1 (MQ=255)

                  tAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGt                                                                                  <  2:994713/97‑1 (MQ=255)

                   aGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGcc                                                                                         >  1:995090/1‑89 (MQ=255)

                   aGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGt                                                                             <  1:994736/101‑1 (MQ=255)

                   aGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGt                                                                             <  1:994788/101‑1 (MQ=255)

                    gATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTg                                                                            <  1:994638/101‑1 (MQ=255)

                      ttGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGt                                                                          >  1:995095/1‑101 (MQ=255)

                       tGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTg                                                                            <  1:994497/98‑1 (MQ=255)

                       tGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGtt                                                                         <  1:994588/101‑1 (MQ=255)

                          cgccAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGa                                                                      >  2:995097/1‑101 (MQ=255)

                           gccAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGaa                                                                     <  1:994615/101‑1 (MQ=255)

                            ccAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGaaa                                                                    >  1:995099/1‑101 (MQ=255)

                             cAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGc                                                                                          <  2:994693/78‑1 (MQ=255)

                                tCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAAcgcg                                                                <  1:994850/101‑1 (MQ=255)

                                tCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAAcgcg                                                                >  2:995101/1‑101 (MQ=255)

                                  ccGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCggg                                                              <  1:994548/101‑1 (MQ=255)

                                   ccccTCGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGt                                                             >  1:995106/3‑101 (MQ=255)

                                   cGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGt                                                             <  2:994634/101‑1 (MQ=255)

                                   cGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGt                                                             >  2:995104/1‑101 (MQ=255)

                                   cGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGt                                                             <  1:994553/101‑1 (MQ=255)

                                    gCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGa                                                                      <  2:994761/91‑1 (MQ=255)

                                    gCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGGAATTCTGATTTGcc                                                                                         >  2:995110/1‑72 (MQ=255)

                                      cTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCg                                                          >  1:995117/1‑101 (MQ=255)

                                      cTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCg                                                          <  2:994471/101‑1 (MQ=255)

                                      cTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCg                                                          >  2:995115/1‑101 (MQ=255)

                                       tGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGc                                                         <  1:994645/101‑1 (MQ=255)

                                        ggCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGcc                                                        >  1:995119/1‑101 (MQ=255)

                                          cTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCa                                                                               >  2:995120/1‑76 (MQ=255)

                                          cTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGcccc                                                      <  2:994859/101‑1 (MQ=255)

                                           tAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCg                                                     <  1:994833/101‑1 (MQ=255)

                                            aaaTCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTCCAGTGGTTCGAAACGCGGGTCCGCCCCGc                                                    >  1:995125/1‑101 (MQ=255)

                                              aTCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAAcgc                                                                 >  1:995130/1‑86 (MQ=255)

                                              aTCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTa                                                  >  2:995128/1‑101 (MQ=255)

                                              aTCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTa                                                  <  1:994488/101‑1 (MQ=255)

                                               tCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTaa                                                 <  2:994752/101‑1 (MQ=255)

                                               tCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTaa                                                 <  2:994818/101‑1 (MQ=255)

                                               tCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTaa                                                 <  2:995088/101‑1 (MQ=255)

                                                cGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAAt                                                >  2:995133/1‑101 (MQ=255)

                                                cGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAAt                                                <  1:994894/101‑1 (MQ=255)

                                                 gagaCGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAAtt                                               <  1:994797/101‑1 (MQ=255)

                                                 gagaCGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAAtt                                               <  2:994732/101‑1 (MQ=255)

                                                  agaCGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAAttt                                              >  1:995135/1‑101 (MQ=255)

                                                   gaCGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTc                                             >  2:995137/1‑101 (MQ=255)

                                                   gaCGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTc                                             <  2:994889/101‑1 (MQ=255)

                                                    aCGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGc                                                    >  2:995140/1‑93 (MQ=255)

                                                         tCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACtat                                       >  1:995145/1‑101 (MQ=255)

                                                          ccTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACtata                                      >  2:995148/1‑101 (MQ=255)

                                                           cTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAg                                     <  1:994887/101‑1 (MQ=255)

                                                           cTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAg                                     >  1:995150/1‑101 (MQ=255)

                                                            tGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAgg                                    <  2:994827/101‑1 (MQ=255)

                                                              cACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGc                                  <  1:994872/101‑1 (MQ=255)

                                                              cACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGc                                  <  1:994999/101‑1 (MQ=255)

                                                               aCGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGcc                                 >  1:995154/1‑101 (MQ=255)

                                                                cGATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCg                                >  2:995156/1‑101 (MQ=255)

                                                                 gATTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGt                               <  1:994794/101‑1 (MQ=255)

                                                                  aTTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGtt                              <  2:994718/101‑1 (MQ=255)

                                                                  aTTTTGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGtt                              <  2:994780/101‑1 (MQ=255)

                                                                   ttttGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTa                             >  2:995159/1‑101 (MQ=255)

                                                                   ttttGTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTa                             >  1:995158/1‑101 (MQ=255)

                                                                       gTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATa                         <  1:994812/101‑1 (MQ=255)

                                                                       gTAGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATa                         <  2:994847/101‑1 (MQ=255)

                                                                         aGCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATAcc                       >  1:995164/1‑101 (MQ=255)

                                                                          gCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCg                      >  2:995166/1‑101 (MQ=255)

                                                                          gCTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCg                      >  1:995167/1‑101 (MQ=255)

                                                                           cTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGc                     >  2:995170/1‑101 (MQ=255)

                                                                           cTTTTACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGc                     <  1:994782/101‑1 (MQ=255)

                                                                            ttttACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCa                    >  1:995172/1‑101 (MQ=255)

                                                                            ttttACCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCa                    >  1:995174/1‑101 (MQ=255)

                                                                                aCCGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCt                >  1:995177/1‑101 (MQ=255)

                                                                                 ccGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTg               <  2:994594/101‑1 (MQ=255)

                                                                                  cGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGc              >  2:995181/1‑101 (MQ=255)

                                                                                  cGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGc              <  1:995109/101‑1 (MQ=255)

                                                                                  cGTCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGc              <  1:994721/101‑1 (MQ=255)

                                                                                    tCGCGCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCg                                                                       <  2:994663/42‑1 (MQ=255)

                                                                                     cgcgCTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGt           >  2:995184/1‑101 (MQ=255)

                                                                                       cgcTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTac         >  1:995186/1‑101 (MQ=255)

                                                                                         cTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTacac       <  2:994777/101‑1 (MQ=255)

                                                                                         cTGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTacac       >  2:995189/1‑101 (MQ=255)

                                                                                          tGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACt      <  2:994843/101‑1 (MQ=255)

                                                                                          tGGTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACt      >  2:995191/1‑101 (MQ=255)

                                                                                            gTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTa    >  1:995195/1‑101 (MQ=255)

                                                                                            gTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTa    >  2:995194/1‑101 (MQ=255)

                                                                                            gTAATTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTa    >  2:995197/1‑101 (MQ=255)

                                                                                              aaTTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTAcc  >  1:995204/1‑101 (MQ=255)

                                                                                              aaTTCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTAcc  >  2:995201/1‑101 (MQ=255)

CTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACC  >  NC_000913/664916‑665110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`