BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,198,319	T→C	intergenic (‑82/‑376)	ymfE ← / → lit	e14 prophage; uncharacterized protein YmfE/e14 prophage; cell death peptidase Lit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,198,319	0	T	C	100.0%	1477.0 / NA	340	intergenic (‑82/‑376)	ymfE/lit	e14 prophage; uncharacterized protein YmfE/e14 prophage; cell death peptidase Lit
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (173/167); total (173/167)

Only 100 of 349 total aligned reads displayed.

TCGAACATATTATTCACCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTTTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGT  >  NC_000913/1198221‑1198416

tCGAACATATTATTCACCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAAtttctt                                                                                                 <  2:1762583/101‑1 (MQ=255)

 cGAACATATTATTCACCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTg                                                                                                >  1:1763030/1‑101 (MQ=255)

 cGAACATATTATTCACCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTg                                                                                                >  2:1763032/1‑101 (MQ=255)

 cGAACATATTATTCACCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTg                                                                                                <  2:1762388/101‑1 (MQ=255)

 cGAACATATTATTCACCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTg                                                                                                <  1:1762577/101‑1 (MQ=255)

    aCATATTATTCACCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTAt                                                                                             >  2:1763036/1‑101 (MQ=255)

      atatTATTCACCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCt                                                                                           >  1:1763039/1‑101 (MQ=255)

      atatTATTCACCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCt                                                                                           <  1:1762139/101‑1 (MQ=255)

           attCACCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCa                                                                                      >  2:1763048/1‑101 (MQ=255)

           attCACCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCa                                                                                      >  1:1763045/1‑101 (MQ=255)

             tCACCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAgg                                                                                    >  2:1763051/1‑101 (MQ=255)

              cACCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGc                                                                                   >  1:1763055/1‑101 (MQ=255)

               aCCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCt                                                                                  <  2:1762465/101‑1 (MQ=255)

               aCCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCt                                                                                  <  1:1762369/101‑1 (MQ=255)

                ccTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTg                                                                                 >  1:1763059/1‑101 (MQ=255)

                 cTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGa                                                                                >  2:1763060/1‑101 (MQ=255)

                  tGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGAc                                                                               <  1:1762605/101‑1 (MQ=255)

                   gAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGAcc                                                                              <  1:1762316/101‑1 (MQ=255)

                    aGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCt                                                                             >  2:1763065/1‑101 (MQ=255)

                     gTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTa                                                                            <  2:1762591/101‑1 (MQ=255)

                     gTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTa                                                                            <  2:1762627/101‑1 (MQ=255)

                        aCGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCt                                                                         >  1:1763068/1‑101 (MQ=255)

                         cGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCtt                                                                        <  1:1762383/101‑1 (MQ=255)

                          gCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTc                                                                       <  1:1762707/101‑1 (MQ=255)

                          gCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTc                                                                       <  1:1762829/101‑1 (MQ=255)

                          gCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTc                                                                       <  2:1762518/101‑1 (MQ=255)

                           cTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGGTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCg                                                                      <  1:1762553/101‑1 (MQ=255)

                              tAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTg                                                                   <  2:1762656/101‑1 (MQ=255)

                               aGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTga                                                                  >  1:1763072/1‑101 (MQ=255)

                               aGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTga                                                                  >  2:1763074/1‑101 (MQ=255)

                                 gATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTgaca                                                                <  2:1762480/101‑1 (MQ=255)

                                 gATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTgaca                                                                <  1:1762639/101‑1 (MQ=255)

                                     gtgtAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTgacagaca                                                            >  1:1763081/1‑101 (MQ=255)

                                     gtgtAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTgacagaca                                                            >  2:1763080/1‑101 (MQ=255)

                                      tgtAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACaa                                                           <  2:1762550/101‑1 (MQ=255)

                                         aaTGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAatat                                                        >  1:1763087/1‑101 (MQ=255)

                                           tGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATtg                                                      >  2:1763089/1‑101 (MQ=255)

                                            ggTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATtgt                                                     >  1:1763094/1‑101 (MQ=255)

                                            ggTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATtgt                                                     >  2:1763095/1‑101 (MQ=255)

                                             gTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAg                                                                           >  1:1763099/1‑78 (MQ=255)

                                                atatTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATc                                                 >  1:1763105/1‑101 (MQ=255)

                                                atatTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATc                                                 >  2:1763106/1‑101 (MQ=255)

                                                 tatTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCa                                                >  1:1763111/1‑101 (MQ=255)

                                                  atTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAg                                               <  2:1762494/101‑1 (MQ=255)

                                                  atTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAg                                               >  2:1763113/1‑101 (MQ=255)

                                                    ttaattaaGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTa                                             >  1:1763119/1‑101 (MQ=255)

                                                    ttaattaaGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTa                                             <  2:1762575/101‑1 (MQ=255)

                                                    ttaattaaGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTa                                             <  1:1762507/101‑1 (MQ=255)

                                                     taattaaGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGt                                              >  1:1763123/1‑99 (MQ=255)

                                                     taattaaGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAg                                            >  2:1763122/1‑101 (MQ=255)

                                                      aattaaGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGc                                           <  2:1762686/101‑1 (MQ=255)

                                                      aattaaGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGc                                           <  1:1762622/101‑1 (MQ=255)

                                                      aattaaGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGc                                           <  2:1762412/101‑1 (MQ=255)

                                                       attaaGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCa                                          <  1:1762796/101‑1 (MQ=255)

                                                       attaaGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCa                                          <  1:1762543/101‑1 (MQ=255)

                                                         taaGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACg                                        >  2:1763127/1‑101 (MQ=255)

                                                          aaGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGt                                       >  1:1763130/1‑101 (MQ=255)

                                                           aGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTa                                      <  2:1762441/101‑1 (MQ=255)

                                                           aGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTa                                      <  2:1762604/101‑1 (MQ=255)

                                                              gtCATTATAGACTGTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCg                                   >  1:1763134/1‑101 (MQ=255)

                                                               tCATTATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCga                                  <  2:1762849/101‑1 (MQ=255)

                                                                  ttATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCgagga                               <  2:1762244/101‑1 (MQ=255)

                                                                  ttATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCgagga                               >  1:1763140/1‑101 (MQ=255)

                                                                  ttATATACTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCgagg                                >  2:1763142/1‑100 (MQ=255)

                                                                   tatataCTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCgaggag                              >  1:1763144/1‑101 (MQ=255)

                                                                    atataCTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCgaggagg                             <  1:1762437/101‑1 (MQ=255)

                                                                     tataCTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCgaggagga                            >  1:1763148/1‑101 (MQ=255)

                                                                     tataCTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCgaggagga                            <  1:1762405/101‑1 (MQ=255)

                                                                      ataCTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCgaggaggag                           >  2:1763152/1‑101 (MQ=255)

                                                                       taCTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGt                          >  1:1763155/1‑101 (MQ=255)

                                                                         cTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAg                        >  2:1763162/1‑101 (MQ=255)

                                                                         cTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAg                        >  1:1763161/1‑101 (MQ=255)

                                                                         cTTTTCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCCGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTa                         <  2:1762756/100‑1 (MQ=255)

                                                                          ttttCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAgc                       <  2:1762730/101‑1 (MQ=255)

                                                                          ttttCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAgc                       >  2:1763165/1‑101 (MQ=255)

                                                                          ttttCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAgc                       >  2:1763170/1‑101 (MQ=255)

                                                                          ttttCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAgc                       <  1:1762528/101‑1 (MQ=255)

                                                                           tttCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAgcg                      >  1:1763174/1‑101 (MQ=255)

                                                                            ttCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAgcgc                     >  2:1763180/1‑101 (MQ=255)

                                                                            ttCAGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAgcgc                     >  2:1763175/1‑101 (MQ=255)

                                                                               aGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTAc                  >  2:1763183/1‑101 (MQ=255)

                                                                               aGTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTAc                  <  2:1762869/101‑1 (MQ=255)

                                                                                gTAGGTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACa                 <  2:1762185/101‑1 (MQ=255)

                                                                                   ggTTAGTTACAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAAt              <  2:1762640/101‑1 (MQ=255)

                                                                                    gttagttaCAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAAtt             >  2:1763188/1‑101 (MQ=255)

                                                                                     ttagttaCAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAAttt            >  1:1763191/1‑101 (MQ=255)

                                                                                      tagttaCAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTg           <  1:1762926/101‑1 (MQ=255)

                                                                                      tagttaCAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTg           <  1:1762470/101‑1 (MQ=255)

                                                                                       agttaCAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGa          <  2:1762720/101‑1 (MQ=255)

                                                                                        gttaCAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGAc         <  2:1762366/101‑1 (MQ=255)

                                                                                         ttaCAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACg        >  1:1763195/1‑101 (MQ=255)

                                                                                          taCAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGc       >  2:1763198/1‑101 (MQ=255)

                                                                                          taCAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGc       <  1:1762669/101‑1 (MQ=255)

                                                                                           aCAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACGAATTTGAc         >  1:1763200/1‑98 (MQ=255)

                                                                                           aCAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCt      <  1:1762599/101‑1 (MQ=255)

                                                                                            cAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTg     <  1:1762763/101‑1 (MQ=255)

                                                                                            cAATTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTg     <  1:1762568/101‑1 (MQ=255)

                                                                                             aaTTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTgg    <  2:1762777/101‑1 (MQ=255)

                                                                                             aaTTTCTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTgg    <  1:1762664/101‑1 (MQ=255)

                                                                                               tttcttGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGt  >  1:1763204/1‑101 (MQ=255)

TCGAACATATTATTCACCTGAGTCACGCTTTAGGATAGTGTAATGGTAATATTTAATTAAGTGTCATTATATACTTTTCAGTAGGTTAGTTACAATTTTTTGTATCTGTTCAGGCTGACCTAGCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGT  >  NC_000913/1198221‑1198416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`