BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,334,189	T→C	I112T (ATC→ACC)	cysB →	DNA‑binding transcriptional dual regulator CysB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,334,189	0	T	C	100.0%	1077.9 / NA	252	I112T (ATC→ACC)	cysB	DNA‑binding transcriptional dual regulator CysB
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (123/129); total (123/129)

Only 100 of 257 total aligned reads displayed.

CATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCATCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAGGCAATGCTGAT  >  NC_000913/1334091‑1334286

cATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGtcacca                                                                                                 <  1:1958618/101‑1 (MQ=255)

 aTAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCaa                                                                                                >  2:1958856/1‑101 (MQ=255)

   aaaaTCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAGCGTCACCAAAg                                                                                              <  1:1958445/101‑1 (MQ=255)

   aaaaTCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAg                                                                                              >  2:1958859/1‑101 (MQ=255)

   aaaaTCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAg                                                                                              >  1:1958858/1‑101 (MQ=255)

    aaaTCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAgg                                                                                             <  2:1958457/101‑1 (MQ=255)

    aaaTCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAgg                                                                                             >  1:1958861/1‑101 (MQ=255)

       tCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCtt                                                                                          >  2:1958863/1‑101 (MQ=255)

         ggTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTa                                                                                        <  1:1958455/101‑1 (MQ=255)

           ttGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTAtt                                                                                      >  2:1958868/1‑101 (MQ=255)

            tGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTCCCAACCGTCACCAAAGGCTTTATTg                                                                                     <  2:1958401/101‑1 (MQ=255)

             gCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGa                                                                                    >  2:1958871/1‑101 (MQ=255)

             gCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGa                                                                                    <  2:1958583/101‑1 (MQ=255)

              ccGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAg                                                                                   <  1:1958555/101‑1 (MQ=255)

               cGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGc                                                                                  >  1:1958876/1‑101 (MQ=255)

               cGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGc                                                                                  >  2:1958875/1‑101 (MQ=255)

                ggAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCg                                                                                 >  2:1958878/1‑101 (MQ=255)

                  agagCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGtt                                                                               >  2:1958883/1‑101 (MQ=255)

                  agagCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGtt                                                                               <  2:1958484/101‑1 (MQ=255)

                    agCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTAt                                                                             >  1:1958885/1‑101 (MQ=255)

                     gCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATc                                                                            >  1:1958888/1‑101 (MQ=255)

                         acCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTcg                                                                        <  1:1958533/101‑1 (MQ=255)

                         acCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTcg                                                                        >  2:1958891/1‑101 (MQ=255)

                         acCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTcg                                                                        <  1:1958485/101‑1 (MQ=255)

                           cTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTcgcg                                                                      <  1:1958656/101‑1 (MQ=255)

                            tGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGt                                                                     >  2:1958894/1‑101 (MQ=255)

                             ggCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGtt                                                                    <  2:1958327/101‑1 (MQ=255)

                              gCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGttt                                                                   <  1:1958580/101‑1 (MQ=255)

                              gCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGttt                                                                   <  1:1958497/101‑1 (MQ=255)

                               ccGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTc                                                                  <  1:1958521/101‑1 (MQ=255)

                               ccGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTc                                                                  <  1:1958357/101‑1 (MQ=255)

                                cGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCt                                                                 >  1:1958896/1‑101 (MQ=255)

                                 ggATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCtt                                                                <  1:1958364/101‑1 (MQ=255)

                                  gATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCttt                                                               >  2:1958899/1‑101 (MQ=255)

                                  gATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCttt                                                               >  2:1958901/1‑101 (MQ=255)

                                  gATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCttt                                                               <  2:1958586/101‑1 (MQ=255)

                                  gATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCttt                                                               <  1:1958299/101‑1 (MQ=255)

                                    tAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGc                                                             <  2:1958823/101‑1 (MQ=255)

                                    tAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGc                                                             >  1:1958902/1‑101 (MQ=255)

                                      aaGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCat                                                           <  1:1958635/101‑1 (MQ=255)

                                        ggTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCatat                                                         <  2:1958452/101‑1 (MQ=255)

                                            cACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCAc                                                     >  2:1958906/1‑101 (MQ=255)

                                             aCTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCAcc                                                    >  2:1958909/1‑101 (MQ=255)

                                              cTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCa                                                   <  1:1958381/101‑1 (MQ=255)

                                              cTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCa                                                   <  2:1958570/101‑1 (MQ=255)

                                               tGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAg                                                  <  1:1958589/101‑1 (MQ=255)

                                               tGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAg                                                  <  1:1958516/101‑1 (MQ=255)

                                               tGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAg                                                  >  2:1958912/1‑101 (MQ=255)

                                                gTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGtt                                                                    <  2:1958241/82‑1 (MQ=255)

                                                gTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAgg                                                 <  1:1958735/101‑1 (MQ=255)

                                                gTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAgg                                                 <  1:1958871/101‑1 (MQ=255)

                                                gTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAgg                                                 <  2:1958702/101‑1 (MQ=255)

                                                 tataTCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAggg                                                >  1:1958913/1‑101 (MQ=255)

                                                  atatCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGc                                               >  1:1958916/1‑101 (MQ=255)

                                                   tatCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCt                                              >  2:1958920/1‑101 (MQ=255)

                                                    atCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTc                                             <  2:1958495/101‑1 (MQ=255)

                                                    atCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTc                                             <  2:1958559/101‑1 (MQ=255)

                                                    atCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTc                                             <  2:1958423/101‑1 (MQ=255)

                                                      cGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGc                                           >  2:1958922/1‑101 (MQ=255)

                                                       gCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGcc                                          >  1:1958926/1‑101 (MQ=255)

                                                       gCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGcc                                          >  2:1958925/1‑101 (MQ=255)

                                                        ccaccaCGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCg                                         <  1:1958549/101‑1 (MQ=255)

                                                         caccacGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCatat                                                         >  2:1958930/1‑84 (MQ=255)

                                                         caccacGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGa                                        <  2:1958805/101‑1 (MQ=255)

                                                          accacGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGac                                       <  1:1958603/101‑1 (MQ=255)

                                                           ccacGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCttt                                                               >  1:1958931/1‑76 (MQ=255)

                                                             acGCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGAcaca                                    >  2:1958935/1‑101 (MQ=255)

                                                               gCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCCCCAGGGCTCGCCGACACaaa                                  <  2:1958604/101‑1 (MQ=255)

                                                               gCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACaaa                                  >  2:1958937/1‑101 (MQ=255)

                                                               gCATACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACaaa                                  <  1:1958396/101‑1 (MQ=255)

                                                                 aTACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAAtt                                >  1:1958943/1‑101 (MQ=255)

                                                                 aTACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAAtt                                >  1:1958938/1‑101 (MQ=255)

                                                                  tACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTg                               <  1:1958473/101‑1 (MQ=255)

                                                                  tACCCAGGCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTg                               >  2:1958944/1‑101 (MQ=255)

                                                                         gCACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGc                        >  1:1958947/1‑101 (MQ=255)

                                                                          cACGCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGcc                       <  1:1958627/101‑1 (MQ=255)

                                                                             gCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGtc                    >  2:1958950/1‑101 (MQ=255)

                                                                             gCTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGtc                    <  2:1958648/101‑1 (MQ=255)

                                                                              cTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGtct                   >  2:1958953/1‑101 (MQ=255)

                                                                              cTACGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGtct                   >  1:1958954/1‑101 (MQ=255)

                                                                                 cGCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTa                <  2:1958697/101‑1 (MQ=255)

                                                                                  gCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTaa               >  2:1958958/1‑101 (MQ=255)

                                                                                  gCATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTaa               <  1:1958673/101‑1 (MQ=255)

                                                                                   cATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTaaa              >  2:1958961/1‑101 (MQ=255)

                                                                                   cATTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTaaa              <  2:1958368/101‑1 (MQ=255)

                                                                                    aTTACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAg             >  1:1958963/1‑101 (MQ=255)

                                                                                     ttACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAgg            <  2:1958669/101‑1 (MQ=255)

                                                                                     ttACCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAgg            >  2:1958966/1‑101 (MQ=255)

                                                                                       aCCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAGGCa          <  1:1958566/101‑1 (MQ=255)

                                                                                       aCCAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAGGCa          >  2:1958968/1‑101 (MQ=255)

                                                                                        ccAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATg                         <  1:1958539/85‑1 (MQ=255)

                                                                                        ccAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAGGCaa         <  2:1958509/101‑1 (MQ=255)

                                                                                        ccAAACGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAGGCaa         >  1:1958969/1‑101 (MQ=255)

                                                                                          aaaCGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAGGCAATg       <  1:1958265/101‑1 (MQ=255)

                                                                                          aaaCGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAGGCAATg       >  1:1958974/1‑101 (MQ=255)

                                                                                          aaaCGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAGGCAATg       >  2:1958975/1‑101 (MQ=255)

                                                                                            aCGTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAGGCAATGCt     <  2:1958675/101‑1 (MQ=255)

                                                                                              gTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAGGCAATGCTGa   <  2:1958616/101‑1 (MQ=255)

                                                                                              gTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAGGCAATGCTGa   >  1:1958978/1‑101 (MQ=255)

                                                                                              gTCACCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAGGCAATGCTGa   <  1:1958608/101‑1 (MQ=255)

CATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCATCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAGGCAATGCTGAT  >  NC_000913/1334091‑1334286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`