BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,634,965	T→C	T295A (ACC→GCC)	ydfN ←	Qin prophage; putative side tail fiber assembly protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,634,965	0	T	C	100.0%	396.6 / NA	102	T295A (ACC→GCC)	ydfN	Qin prophage; putative side tail fiber assembly protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (48/54); total (48/54)

Only 100 of 102 total aligned reads displayed.

ATGCAAGCCTCACAATATAGTTAAATGCGATGTTTTTGACGGTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGTGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGACAGCGAG  >  NC_000913/1634887‑1635062

atccAAGCCTCACAATATAGTTAAATGCGATGTTTTTGACGGTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCa                                                                                   >  1:2392782/4‑95 (MQ=0)

                                    tGACGGTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTAtgt                                         >  2:2392838/1‑101 (MQ=11)

                                     gACGGTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTAtgtg                                        <  1:2392459/101‑1 (MQ=14)

                                     gACGGTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTAtgtg                                        >  1:2392839/1‑101 (MQ=14)

                                     gACGGTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTAtgtg                                        >  1:2392840/1‑101 (MQ=14)

                                     gACGGTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTAtgtg                                        >  1:2392841/1‑101 (MQ=14)

                                      aCGGTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGc                                       >  1:2392842/1‑101 (MQ=17)

                                       cGGTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCa                                      >  2:2392844/1‑101 (MQ=18)

                                       cGGTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCa                                      >  2:2392843/1‑101 (MQ=18)

                                        ggTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCAt                                     >  1:2392846/1‑101 (MQ=25)

                                        ggTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCAt                                     >  2:2392845/1‑101 (MQ=25)

                                        ggTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCAt                                     <  1:2392374/101‑1 (MQ=25)

                                        ggTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCAt                                     >  2:2392847/1‑101 (MQ=25)

                                        ggTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCAt                                     <  1:2392405/101‑1 (MQ=25)

                                        ggTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCAt                                     <  2:2392465/101‑1 (MQ=25)

                                        ggTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGNATGTGCAt                                     <  1:2392429/101‑1 (MQ=25)

                                         gtgtTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATg                                    >  2:2392848/1‑101 (MQ=25)

                                          tgtTTTCCGCGTTACCAGCAGGGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgc                                   >  1:2392851/1‑101 (MQ=255)

                                          tgtTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgc                                   >  1:2392850/1‑101 (MQ=255)

                                          tgtTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgc                                   >  2:2392849/1‑101 (MQ=38)

                                          tgtTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgc                                   >  2:2392852/1‑101 (MQ=255)

                                          tgtTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgc                                   <  1:2392338/101‑1 (MQ=38)

                                           gtTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgcg                                  <  1:2392427/101‑1 (MQ=255)

                                           gtTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgcg                                  >  2:2392853/1‑101 (MQ=255)

                                            ttttCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgcgc                                 <  1:2392723/101‑1 (MQ=255)

                                            ttttCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgcgc                                 >  1:2392854/1‑101 (MQ=255)

                                             tttCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgcgcg                                >  1:2392855/1‑101 (MQ=255)

                                             tttCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgcgcg                                >  1:2392856/1‑101 (MQ=255)

                                             tttCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgcgcg                                >  1:2392858/1‑101 (MQ=255)

                                             tttCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgcgcg                                >  2:2392857/1‑101 (MQ=255)

                                             tttCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgcgcg                                >  2:2392859/1‑101 (MQ=255)

                                             tttCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgcgcg                                <  2:2392490/101‑1 (MQ=255)

                                              ttCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgcgcgc                               >  2:2392860/1‑101 (MQ=255)

                                              ttCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgcgcgc                               >  2:2392861/1‑101 (MQ=255)

                                              ttCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATgcgcgc                               <  2:2392519/101‑1 (MQ=255)

                                               tCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGcc                              >  1:2392862/1‑101 (MQ=255)

                                               tCCGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGcc                              <  1:2392349/101‑1 (MQ=255)

                                                ccGCGTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCt                             >  2:2392863/1‑101 (MQ=255)

                                                 cgcgTTATCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTg                            >  1:2392866/1‑101 (MQ=255)

                                                 cgcgTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTg                            >  1:2392867/1‑101 (MQ=255)

                                                 cgcgTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTg                            >  1:2392868/1‑101 (MQ=255)

                                                 cgcgTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTg                            <  2:2392822/101‑1 (MQ=255)

                                                 cgcgTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTg                            >  2:2392865/1‑101 (MQ=255)

                                                  gcgTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTgc                           <  1:2392358/101‑1 (MQ=255)

                                                   cgTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTgcg                          <  2:2392122/101‑1 (MQ=255)

                                                    gTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTgcgc                         <  1:2392334/101‑1 (MQ=255)

                                                    gTTACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTgcgc                         <  2:2392638/101‑1 (MQ=255)

                                                     ttACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCt                        >  1:2392870/1‑101 (MQ=255)

                                                      tACCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCtt                       <  1:2392623/101‑1 (MQ=255)

                                                       aCCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTg                      >  1:2392871/1‑101 (MQ=255)

                                                       aCCAGCAGCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTg                      <  2:2392213/101‑1 (MQ=255)

                                                         cagcagCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTgca                    <  2:2392293/101‑1 (MQ=255)

                                                         cagcagCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTgca                    <  2:2392381/101‑1 (MQ=255)

                                                         cagcagCGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTgca                    <  2:2392470/101‑1 (MQ=255)

                                                          agcagcGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTgcag                   >  1:2392873/1‑101 (MQ=255)

                                                          agcagcGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTgcag                   <  1:2392332/101‑1 (MQ=255)

                                                          agcagcGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTgcag                   >  2:2392872/1‑101 (MQ=255)

                                                            cagcGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTgcagca                 <  2:2392559/101‑1 (MQ=255)

                                                            cagcGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTgcagca                 >  1:2392874/1‑101 (MQ=255)

                                                            cagcGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTgcagca                 <  2:2392265/101‑1 (MQ=255)

                                                             agcGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGcagcag                <  1:2392294/101‑1 (MQ=255)

                                                             agcGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGcagcag                >  1:2392876/1‑101 (MQ=255)

                                                             agcGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGcagcag                <  1:2392249/101‑1 (MQ=255)

                                                              gcGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGt               <  2:2392115/101‑1 (MQ=255)

                                                              gcGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGt               <  1:2392303/101‑1 (MQ=255)

                                                               cGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTg              <  1:2392493/101‑1 (MQ=255)

                                                               cGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTg              <  1:2392492/101‑1 (MQ=255)

                                                               cGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTg              >  1:2392878/1‑101 (MQ=255)

                                                               cGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTg              <  1:2392386/101‑1 (MQ=255)

                                                               cGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTg              <  1:2392373/101‑1 (MQ=255)

                                                               cGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTg              <  1:2392369/101‑1 (MQ=255)

                                                               cGTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTg              >  2:2392877/1‑101 (MQ=255)

                                                                gTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGc             >  1:2392880/1‑101 (MQ=255)

                                                                gTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGc             <  2:2392496/101‑1 (MQ=255)

                                                                gTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGc             >  1:2392879/1‑101 (MQ=255)

                                                                gTTAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGc             <  2:2392434/101‑1 (MQ=255)

                                                                 ttAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGcagcag                >  2:2392881/1‑97 (MQ=255)

                                                                  tAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCg           <  2:2392468/101‑1 (MQ=255)

                                                                  tAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCg           <  1:2392466/101‑1 (MQ=255)

                                                                  tAACGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCg           >  2:2392882/1‑101 (MQ=255)

                                                                   aaCGGTGATGGCGTGTCCATGTGATCCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCgg          <  1:2392448/101‑1 (MQ=255)

                                                                   aaCGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCgg          <  1:2392539/101‑1 (MQ=255)

                                                                   aaCGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGGGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCgg          >  2:2392883/1‑101 (MQ=255)

                                                                    aCGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGa         <  1:2392562/101‑1 (MQ=255)

                                                                    aCGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGa         >  1:2392884/1‑101 (MQ=255)

                                                                    aCGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGa         <  1:2392352/101‑1 (MQ=255)

                                                                     cGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGAc        <  2:2392431/101‑1 (MQ=255)

                                                                     cGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGAc        <  1:2392413/101‑1 (MQ=255)

                                                                     cGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGAc        >  1:2392886/1‑101 (MQ=255)

                                                                     cGGTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTAGGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGAc        <  2:2392521/101‑1 (MQ=255)

                                                                       gTGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGACAg      <  1:2392397/101‑1 (MQ=255)

                                                                       gTGATGGCGTGTCCATGCGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGACAg      <  2:2392371/101‑1 (MQ=255)

                                                                        tGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGACAGc     <  2:2392453/101‑1 (MQ=255)

                                                                        tGATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGACAGc     <  2:2392446/101‑1 (MQ=255)

                                                                         gATGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGACAGCg    <  1:2392422/101‑1 (MQ=255)

                                                                          aTGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGACAGCGa   <  1:2392370/101‑1 (MQ=255)

                                                                          aTGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGACAGCGa   <  2:2392445/101‑1 (MQ=255)

                                                                          aTGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGACAGCGa   <  2:2392510/101‑1 (MQ=255)

                                                                          aTGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGACAGCGa   <  2:2392541/101‑1 (MQ=255)

                                                                           tGGCGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGACAGCGAg  <  1:2392479/101‑1 (MQ=255)

ATGCAAGCCTCACAATATAGTTAAATGCGATGTTTTTGACGGTGTTTTCCGCGTTACCAGCAGCGTTAACGGTGATGGTGTGTCCATGTGAACCAATCGCAACGGAGTGCGTATGAGCACCAATACCGACAGTATGTGCATGCGCGCCTGCGCTTGCAGCAGTGCCGGACAGCGAG  >  NC_000913/1634887‑1635062

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`